Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 RNU6-222P-201ENST00000362438 107 ntBASIC3.03□□□□□ -1.92
COL4A3BPQ9Y5P4 RNU6-1115P-201ENST00000362490 106 ntBASIC3.03□□□□□ -1.92
COL4A3BPQ9Y5P4 Y_RNA.197-201ENST00000364004 102 ntBASIC3.03□□□□□ -1.92
COL4A3BPQ9Y5P4 Y_RNA.314-201ENST00000365114 102 ntBASIC3.03□□□□□ -1.92
COL4A3BPQ9Y5P4 MIR10B-201ENST00000385011 110 ntBASIC3.03□□□□□ -1.92
COL4A3BPQ9Y5P4 MIR549A-201ENST00000385268 96 ntBASIC3.03□□□□□ -1.92
COL4A3BPQ9Y5P4 SNORA40.19-201ENST00000390846 128 ntBASIC3.03□□□□□ -1.92
COL4A3BPQ9Y5P4 AC114482.1-201ENST00000418010 247 ntBASIC3.03□□□□□ -1.92
COL4A3BPQ9Y5P4 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.03□□□□□ -1.92
COL4A3BPQ9Y5P4 WARS2P1-201ENST00000429678 537 ntBASIC3.03□□□□□ -1.92
COL4A3BPQ9Y5P4 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.03□□□□□ -1.92
COL4A3BPQ9Y5P4 AL109933.2-201ENST00000452651 260 ntBASIC3.03□□□□□ -1.92
COL4A3BPQ9Y5P4 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.03□□□□□ -1.92
COL4A3BPQ9Y5P4 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.03□□□□□ -1.92
COL4A3BPQ9Y5P4 UBL5P4-201ENST00000562584 236 ntBASIC3.03□□□□□ -1.92
COL4A3BPQ9Y5P4 MIR3162-201ENST00000581818 82 ntBASIC3.03□□□□□ -1.92
COL4A3BPQ9Y5P4 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
COL4A3BPQ9Y5P4 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
COL4A3BPQ9Y5P4 RNU6-874P-201ENST00000362390 105 ntBASIC3.02□□□□□ -1.93
COL4A3BPQ9Y5P4 Y_RNA.99-201ENST00000363138 105 ntBASIC3.02□□□□□ -1.93
COL4A3BPQ9Y5P4 Y_RNA.358-201ENST00000365491 99 ntBASIC3.02□□□□□ -1.93
COL4A3BPQ9Y5P4 Y_RNA.419-201ENST00000384041 102 ntBASIC3.02□□□□□ -1.93
COL4A3BPQ9Y5P4 MIR29C-201ENST00000385231 88 ntBASIC3.02□□□□□ -1.93
COL4A3BPQ9Y5P4 MIR524-201ENST00000385242 87 ntBASIC3.02□□□□□ -1.93
COL4A3BPQ9Y5P4 Y_RNA.605-201ENST00000410577 105 ntBASIC3.02□□□□□ -1.93
COL4A3BPQ9Y5P4 RNU2-52P-201ENST00000410680 190 ntBASIC3.02□□□□□ -1.93
COL4A3BPQ9Y5P4 RN7SKP284-201ENST00000411002 343 ntBASIC3.02□□□□□ -1.93
COL4A3BPQ9Y5P4 RNA5SP270-201ENST00000411361 118 ntBASIC3.02□□□□□ -1.93
COL4A3BPQ9Y5P4 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.02□□□□□ -1.93
COL4A3BPQ9Y5P4 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.02□□□□□ -1.93
COL4A3BPQ9Y5P4 AC096638.1-201ENST00000444678 216 ntBASIC3.02□□□□□ -1.93
COL4A3BPQ9Y5P4 AC074290.1-201ENST00000448883 135 ntBASIC3.02□□□□□ -1.93
COL4A3BPQ9Y5P4 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.02□□□□□ -1.93
COL4A3BPQ9Y5P4 AC114982.1-201ENST00000469402 321 ntBASIC3.02□□□□□ -1.93
COL4A3BPQ9Y5P4 RN7SL297P-201ENST00000483161 293 ntBASIC3.02□□□□□ -1.93
COL4A3BPQ9Y5P4 AC105758.1-201ENST00000506038 399 ntBASIC3.02□□□□□ -1.93
COL4A3BPQ9Y5P4 AL031274.2-201ENST00000599419 203 ntBASIC3.02□□□□□ -1.93
COL4A3BPQ9Y5P4 AL080274.1-201ENST00000605565 220 ntBASIC3.02□□□□□ -1.93
COL4A3BPQ9Y5P4 SNORD14A-201ENST00000606526 91 ntBASIC3.02□□□□□ -1.93
COL4A3BPQ9Y5P4 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.02□□□□□ -1.93
COL4A3BPQ9Y5P4 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.02□□□□□ -1.93
COL4A3BPQ9Y5P4 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.02□□□□□ -1.93
COL4A3BPQ9Y5P4 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
COL4A3BPQ9Y5P4 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
COL4A3BPQ9Y5P4 AC006026.1-201ENST00000444025 1803 ntBASIC3.01□□□□□ -1.93
COL4A3BPQ9Y5P4 RNU6-859P-201ENST00000362728 107 ntBASIC3.01□□□□□ -1.93
COL4A3BPQ9Y5P4 Y_RNA.252-201ENST00000364556 101 ntBASIC3.01□□□□□ -1.93
COL4A3BPQ9Y5P4 RNU6-793P-201ENST00000384233 104 ntBASIC3.01□□□□□ -1.93
COL4A3BPQ9Y5P4 HMGN2P35-201ENST00000412164 270 ntBASIC3.01□□□□□ -1.93
COL4A3BPQ9Y5P4 ATP5EP1-201ENST00000510257 156 ntBASIC3.01□□□□□ -1.93
COL4A3BPQ9Y5P4 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.01□□□□□ -1.93
COL4A3BPQ9Y5P4 MIR4753-201ENST00000585119 83 ntBASIC3.01□□□□□ -1.93
COL4A3BPQ9Y5P4 SNORD11B-201ENST00000607707 90 ntBASIC3.01□□□□□ -1.93
COL4A3BPQ9Y5P4 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.01□□□□□ -1.93
COL4A3BPQ9Y5P4 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
COL4A3BPQ9Y5P4 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
COL4A3BPQ9Y5P4 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.01□□□□□ -1.93
COL4A3BPQ9Y5P4 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
COL4A3BPQ9Y5P4 Y_RNA.179-201ENST00000363844 90 ntBASIC3□□□□□ -1.93
COL4A3BPQ9Y5P4 SNORD14D-201ENST00000384390 87 ntBASIC3□□□□□ -1.93
COL4A3BPQ9Y5P4 Y_RNA.557-201ENST00000384680 107 ntBASIC3□□□□□ -1.93
COL4A3BPQ9Y5P4 AL356057.3-201ENST00000402607 340 ntBASIC3□□□□□ -1.93
COL4A3BPQ9Y5P4 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3□□□□□ -1.93
COL4A3BPQ9Y5P4 EIF1P2-201ENST00000428233 350 ntBASIC3□□□□□ -1.93
COL4A3BPQ9Y5P4 AC016925.1-201ENST00000458303 298 ntBASIC3□□□□□ -1.93
COL4A3BPQ9Y5P4 Y_RNA.661-201ENST00000516003 99 ntBASIC3□□□□□ -1.93
COL4A3BPQ9Y5P4 AC093023.1-201ENST00000547375 507 ntBASIC3□□□□□ -1.93
COL4A3BPQ9Y5P4 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3□□□□□ -1.93
COL4A3BPQ9Y5P4 MIR5194-201ENST00000582634 120 ntBASIC3□□□□□ -1.93
COL4A3BPQ9Y5P4 AC010999.1-201ENST00000611856 324 ntBASIC3□□□□□ -1.93
COL4A3BPQ9Y5P4 AL138825.1-201ENST00000618587 192 ntBASIC3□□□□□ -1.93
COL4A3BPQ9Y5P4 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3□□□□□ -1.93
COL4A3BPQ9Y5P4 MIR6733-201ENST00000635723 61 ntBASIC3□□□□□ -1.93
COL4A3BPQ9Y5P4 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3□□□□□ -1.93
COL4A3BPQ9Y5P4 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
COL4A3BPQ9Y5P4 Y_RNA.132-201ENST00000363421 102 ntBASIC2.99□□□□□ -1.93
COL4A3BPQ9Y5P4 Y_RNA.332-201ENST00000365271 113 ntBASIC2.99□□□□□ -1.93
COL4A3BPQ9Y5P4 MIR628-201ENST00000385229 95 ntBASIC2.99□□□□□ -1.93
COL4A3BPQ9Y5P4 MIR1283-1-201ENST00000408494 87 ntBASIC2.99□□□□□ -1.93
COL4A3BPQ9Y5P4 Y_RNA.592-201ENST00000410274 109 ntBASIC2.99□□□□□ -1.93
COL4A3BPQ9Y5P4 AC123900.1-201ENST00000420390 96 ntBASIC2.99□□□□□ -1.93
COL4A3BPQ9Y5P4 MRPS18CP6-201ENST00000423587 223 ntBASIC2.99□□□□□ -1.93
COL4A3BPQ9Y5P4 AL445305.1-201ENST00000432577 575 ntBASIC2.99□□□□□ -1.93
COL4A3BPQ9Y5P4 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.99□□□□□ -1.93
COL4A3BPQ9Y5P4 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.99□□□□□ -1.93
COL4A3BPQ9Y5P4 Y_RNA.639-201ENST00000458981 102 ntBASIC2.99□□□□□ -1.93
COL4A3BPQ9Y5P4 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.99□□□□□ -1.93
COL4A3BPQ9Y5P4 AC022868.1-201ENST00000517767 391 ntBASIC2.99□□□□□ -1.93
COL4A3BPQ9Y5P4 CYCSP23-201ENST00000519781 313 ntBASIC2.99□□□□□ -1.93
COL4A3BPQ9Y5P4 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.99□□□□□ -1.93
COL4A3BPQ9Y5P4 AC023442.1-201ENST00000531247 422 ntBASIC2.99□□□□□ -1.93
COL4A3BPQ9Y5P4 RRN3P3-201ENST00000549207 578 ntBASIC2.99□□□□□ -1.93
COL4A3BPQ9Y5P4 PRELID2P1-201ENST00000552837 301 ntBASIC2.99□□□□□ -1.93
COL4A3BPQ9Y5P4 AC025754.2-201ENST00000606491 432 ntBASIC2.99□□□□□ -1.93
COL4A3BPQ9Y5P4 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.99□□□□□ -1.93
COL4A3BPQ9Y5P4 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
COL4A3BPQ9Y5P4 AL136360.1-201ENST00000503377 1900 ntBASIC2.98□□□□□ -1.93
COL4A3BPQ9Y5P4 RNU1-115P-201ENST00000365329 160 ntBASIC2.98□□□□□ -1.93
COL4A3BPQ9Y5P4 RNU6-281P-201ENST00000384212 103 ntBASIC2.98□□□□□ -1.93
COL4A3BPQ9Y5P4 MIR196B-201ENST00000384852 84 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms