Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 ZNF886P-201ENST00000450781 723 ntBASIC-0.61□□□□□ -2.51
UBE2D4Q9Y2X8 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.61□□□□□ -2.51
UBE2D4Q9Y2X8 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.61□□□□□ -2.51
UBE2D4Q9Y2X8 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC-0.61□□□□□ -2.51
UBE2D4Q9Y2X8 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC-0.61□□□□□ -2.51
UBE2D4Q9Y2X8 AC004832.4-201ENST00000608952 331 ntBASIC-0.61□□□□□ -2.51
UBE2D4Q9Y2X8 AC007014.2-201ENST00000615581 479 ntBASIC-0.61□□□□□ -2.51
UBE2D4Q9Y2X8 MIR6755-201ENST00000619993 66 ntBASIC-0.61□□□□□ -2.51
UBE2D4Q9Y2X8 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC-0.61□□□□□ -2.51
UBE2D4Q9Y2X8 SNORA2.2-201ENST00000365473 135 ntBASIC-0.62□□□□□ -2.51
UBE2D4Q9Y2X8 RNA5SP300-201ENST00000391197 107 ntBASIC-0.62□□□□□ -2.51
UBE2D4Q9Y2X8 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC-0.62□□□□□ -2.51
UBE2D4Q9Y2X8 SNORD111-201ENST00000408139 94 ntBASIC-0.62□□□□□ -2.51
UBE2D4Q9Y2X8 RNU4-46P-201ENST00000410818 138 ntBASIC-0.62□□□□□ -2.51
UBE2D4Q9Y2X8 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC-0.62□□□□□ -2.51
UBE2D4Q9Y2X8 MTND4P25-201ENST00000441039 533 ntBASIC-0.62□□□□□ -2.51
UBE2D4Q9Y2X8 AL606517.2-201ENST00000442855 241 ntBASIC-0.62□□□□□ -2.51
UBE2D4Q9Y2X8 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC-0.62□□□□□ -2.51
UBE2D4Q9Y2X8 RNU7-165P-201ENST00000458864 60 ntBASIC-0.62□□□□□ -2.51
UBE2D4Q9Y2X8 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC-0.62□□□□□ -2.51
UBE2D4Q9Y2X8 RNA5SP94-201ENST00000516917 108 ntBASIC-0.62□□□□□ -2.51
UBE2D4Q9Y2X8 SCARNA1-201ENST00000517138 166 ntBASIC-0.62□□□□□ -2.51
UBE2D4Q9Y2X8 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC-0.62□□□□□ -2.51
UBE2D4Q9Y2X8 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.62□□□□□ -2.51
UBE2D4Q9Y2X8 AC021231.3-201ENST00000558497 370 ntBASIC-0.62□□□□□ -2.51
UBE2D4Q9Y2X8 MIR4778-201ENST00000577635 80 ntBASIC-0.62□□□□□ -2.51
UBE2D4Q9Y2X8 MIR3612-201ENST00000579753 87 ntBASIC-0.62□□□□□ -2.51
UBE2D4Q9Y2X8 AC011921.3-201ENST00000605540 361 ntBASIC-0.62□□□□□ -2.51
UBE2D4Q9Y2X8 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC-0.62□□□□□ -2.51
UBE2D4Q9Y2X8 AC006001.4-201ENST00000622243 395 ntBASIC-0.62□□□□□ -2.51
UBE2D4Q9Y2X8 MIR1-1-201ENST00000362147 71 ntBASIC-0.63□□□□□ -2.51
UBE2D4Q9Y2X8 SNORA27.3-201ENST00000364937 134 ntBASIC-0.63□□□□□ -2.51
UBE2D4Q9Y2X8 RNU6-40P-201ENST00000384254 107 ntBASIC-0.63□□□□□ -2.51
UBE2D4Q9Y2X8 SNORA8.2-201ENST00000384372 139 ntBASIC-0.63□□□□□ -2.51
UBE2D4Q9Y2X8 SNORA12.1-201ENST00000390873 148 ntBASIC-0.63□□□□□ -2.51
UBE2D4Q9Y2X8 ZNF736P10Y-201ENST00000403990 1110 ntBASIC-0.63□□□□□ -2.51
UBE2D4Q9Y2X8 AL359634.1-202ENST00000404721 284 ntBASIC-0.63□□□□□ -2.51
UBE2D4Q9Y2X8 RNU6-735P-201ENST00000410612 107 ntBASIC-0.63□□□□□ -2.51
UBE2D4Q9Y2X8 RNU6-1025P-201ENST00000410629 104 ntBASIC-0.63□□□□□ -2.51
UBE2D4Q9Y2X8 RNU6-57P-201ENST00000411348 103 ntBASIC-0.63□□□□□ -2.51
UBE2D4Q9Y2X8 AL356583.2-201ENST00000426536 280 ntBASIC-0.63□□□□□ -2.51
UBE2D4Q9Y2X8 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.63□□□□□ -2.51
UBE2D4Q9Y2X8 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC-0.63□□□□□ -2.51
UBE2D4Q9Y2X8 RPL17P35-201ENST00000432217 549 ntBASIC-0.63□□□□□ -2.51
UBE2D4Q9Y2X8 RNU7-159P-201ENST00000459284 62 ntBASIC-0.63□□□□□ -2.51
UBE2D4Q9Y2X8 snoU109.2-201ENST00000459316 135 ntBASIC-0.63□□□□□ -2.51
UBE2D4Q9Y2X8 RNU7-14P-201ENST00000459331 62 ntBASIC-0.63□□□□□ -2.51
UBE2D4Q9Y2X8 AC091021.1-201ENST00000468051 388 ntBASIC-0.63□□□□□ -2.51
UBE2D4Q9Y2X8 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC-0.63□□□□□ -2.51
UBE2D4Q9Y2X8 CTHRC1P1-201ENST00000605383 469 ntBASIC-0.63□□□□□ -2.51
UBE2D4Q9Y2X8 AL357080.1-201ENST00000617394 239 ntBASIC-0.63□□□□□ -2.51
UBE2D4Q9Y2X8 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.63□□□□□ -2.51
UBE2D4Q9Y2X8 Y_RNA.132-201ENST00000363421 102 ntBASIC-0.64□□□□□ -2.51
UBE2D4Q9Y2X8 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.64□□□□□ -2.51
UBE2D4Q9Y2X8 SNORD95.1-201ENST00000364099 68 ntBASIC-0.64□□□□□ -2.51
UBE2D4Q9Y2X8 RNU6-72P-201ENST00000384285 79 ntBASIC-0.64□□□□□ -2.51
UBE2D4Q9Y2X8 Y_RNA.518-201ENST00000384552 113 ntBASIC-0.64□□□□□ -2.51
UBE2D4Q9Y2X8 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC-0.64□□□□□ -2.51
UBE2D4Q9Y2X8 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC-0.64□□□□□ -2.51
UBE2D4Q9Y2X8 AC093019.1-201ENST00000443135 252 ntBASIC-0.64□□□□□ -2.51
UBE2D4Q9Y2X8 TPT1P7-201ENST00000458300 517 ntBASIC-0.64□□□□□ -2.51
UBE2D4Q9Y2X8 RNU7-56P-201ENST00000458744 62 ntBASIC-0.64□□□□□ -2.51
UBE2D4Q9Y2X8 RNA5SP268-201ENST00000516828 124 ntBASIC-0.64□□□□□ -2.51
UBE2D4Q9Y2X8 RNA5SP337-201ENST00000517007 109 ntBASIC-0.64□□□□□ -2.51
UBE2D4Q9Y2X8 AL606834.3-201ENST00000602615 496 ntBASIC-0.64□□□□□ -2.51
UBE2D4Q9Y2X8 RPL21P136-201ENST00000605378 396 ntBASIC-0.64□□□□□ -2.51
UBE2D4Q9Y2X8 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC-0.64□□□□□ -2.51
UBE2D4Q9Y2X8 AL591926.4-201ENST00000616895 298 ntBASIC-0.64□□□□□ -2.51
UBE2D4Q9Y2X8 SCARNA4-202ENST00000625402 129 ntBASIC-0.64□□□□□ -2.51
UBE2D4Q9Y2X8 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC-0.64□□□□□ -2.51
UBE2D4Q9Y2X8 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.64□□□□□ -2.51
UBE2D4Q9Y2X8 RNU6-39P-201ENST00000384344 107 ntBASIC-0.65□□□□□ -2.51
UBE2D4Q9Y2X8 RNU6-284P-201ENST00000411105 106 ntBASIC-0.65□□□□□ -2.51
UBE2D4Q9Y2X8 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC-0.65□□□□□ -2.51
UBE2D4Q9Y2X8 AL365338.1-201ENST00000422282 858 ntBASIC-0.65□□□□□ -2.51
UBE2D4Q9Y2X8 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC-0.65□□□□□ -2.51
UBE2D4Q9Y2X8 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-0.65□□□□□ -2.51
UBE2D4Q9Y2X8 AC074198.2-201ENST00000508153 258 ntBASIC-0.65□□□□□ -2.51
UBE2D4Q9Y2X8 AC026782.1-201ENST00000512952 449 ntBASIC-0.65□□□□□ -2.51
UBE2D4Q9Y2X8 MIR3192-201ENST00000584920 77 ntBASIC-0.65□□□□□ -2.51
UBE2D4Q9Y2X8 7SK.7-201ENST00000603504 247 ntBASIC-0.65□□□□□ -2.51
UBE2D4Q9Y2X8 BCRP9-201ENST00000605312 388 ntBASIC-0.65□□□□□ -2.51
UBE2D4Q9Y2X8 uc_338.16-201ENST00000621804 95 ntBASIC-0.65□□□□□ -2.51
UBE2D4Q9Y2X8 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC-0.65□□□□□ -2.51
UBE2D4Q9Y2X8 Y_RNA.60-201ENST00000362831 98 ntBASIC-0.66□□□□□ -2.52
UBE2D4Q9Y2X8 SNORD56.1-201ENST00000362913 68 ntBASIC-0.66□□□□□ -2.52
UBE2D4Q9Y2X8 SNORD114-15-201ENST00000364687 72 ntBASIC-0.66□□□□□ -2.52
UBE2D4Q9Y2X8 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.66□□□□□ -2.52
UBE2D4Q9Y2X8 RNU6-925P-201ENST00000384629 104 ntBASIC-0.66□□□□□ -2.52
UBE2D4Q9Y2X8 RNU6-269P-201ENST00000391077 97 ntBASIC-0.66□□□□□ -2.52
UBE2D4Q9Y2X8 RPS20P2-201ENST00000402520 389 ntBASIC-0.66□□□□□ -2.52
UBE2D4Q9Y2X8 RNU2-59P-201ENST00000410482 191 ntBASIC-0.66□□□□□ -2.52
UBE2D4Q9Y2X8 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.66□□□□□ -2.52
UBE2D4Q9Y2X8 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC-0.66□□□□□ -2.52
UBE2D4Q9Y2X8 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC-0.66□□□□□ -2.52
UBE2D4Q9Y2X8 MRPS10P2-201ENST00000431226 381 ntBASIC-0.66□□□□□ -2.52
UBE2D4Q9Y2X8 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-0.66□□□□□ -2.52
UBE2D4Q9Y2X8 AC004854.1-201ENST00000440356 349 ntBASIC-0.66□□□□□ -2.52
UBE2D4Q9Y2X8 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.66□□□□□ -2.52
UBE2D4Q9Y2X8 snoU13.19-201ENST00000459148 104 ntBASIC-0.66□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms