Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
TRAPPC4Q9Y296 MIR3169-201ENST00000578032 83 ntBASIC1.42□□□□□ -2.18
TRAPPC4Q9Y296 MIR4285-201ENST00000581001 85 ntBASIC1.42□□□□□ -2.18
TRAPPC4Q9Y296 MIR4713-201ENST00000582691 75 ntBASIC1.42□□□□□ -2.18
TRAPPC4Q9Y296 FGF7P1-201ENST00000582820 288 ntBASIC1.42□□□□□ -2.18
TRAPPC4Q9Y296 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.42□□□□□ -2.18
TRAPPC4Q9Y296 AL022345.1-201ENST00000607292 135 ntBASIC1.42□□□□□ -2.18
TRAPPC4Q9Y296 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
TRAPPC4Q9Y296 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.42□□□□□ -2.18
TRAPPC4Q9Y296 Y_RNA.123-201ENST00000363338 102 ntBASIC1.41□□□□□ -2.18
TRAPPC4Q9Y296 RNA5SP493-201ENST00000364115 91 ntBASIC1.41□□□□□ -2.18
TRAPPC4Q9Y296 SNORD114-6-201ENST00000364393 72 ntBASIC1.41□□□□□ -2.18
TRAPPC4Q9Y296 Y_RNA.414-201ENST00000384011 101 ntBASIC1.41□□□□□ -2.18
TRAPPC4Q9Y296 SNORA32.2-201ENST00000384049 122 ntBASIC1.41□□□□□ -2.18
TRAPPC4Q9Y296 RNU6-95P-201ENST00000384697 107 ntBASIC1.41□□□□□ -2.18
TRAPPC4Q9Y296 MIR517C-201ENST00000385103 95 ntBASIC1.41□□□□□ -2.18
TRAPPC4Q9Y296 EIF4EP2-201ENST00000422816 654 ntBASIC1.41□□□□□ -2.18
TRAPPC4Q9Y296 MTND1P34-201ENST00000438556 671 ntBASIC1.41□□□□□ -2.18
TRAPPC4Q9Y296 snoU13.6-201ENST00000458785 104 ntBASIC1.41□□□□□ -2.18
TRAPPC4Q9Y296 RNU7-187P-201ENST00000458985 68 ntBASIC1.41□□□□□ -2.18
TRAPPC4Q9Y296 TOMM22P6-201ENST00000465035 409 ntBASIC1.41□□□□□ -2.18
TRAPPC4Q9Y296 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.41□□□□□ -2.18
TRAPPC4Q9Y296 AC008834.1-201ENST00000511612 175 ntBASIC1.41□□□□□ -2.18
TRAPPC4Q9Y296 RNU6-256P-201ENST00000516747 97 ntBASIC1.41□□□□□ -2.18
TRAPPC4Q9Y296 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.41□□□□□ -2.18
TRAPPC4Q9Y296 DEFB131C-201ENST00000528817 165 ntBASIC1.41□□□□□ -2.18
TRAPPC4Q9Y296 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.41□□□□□ -2.18
TRAPPC4Q9Y296 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.41□□□□□ -2.18
TRAPPC4Q9Y296 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.41□□□□□ -2.18
TRAPPC4Q9Y296 AC025754.2-201ENST00000606491 432 ntBASIC1.41□□□□□ -2.18
TRAPPC4Q9Y296 RMST_6.1-201ENST00000611980 203 ntBASIC1.41□□□□□ -2.18
TRAPPC4Q9Y296 MIR7974-201ENST00000615835 79 ntBASIC1.41□□□□□ -2.18
TRAPPC4Q9Y296 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.41□□□□□ -2.18
TRAPPC4Q9Y296 MIR7843-201ENST00000622274 79 ntBASIC1.41□□□□□ -2.18
TRAPPC4Q9Y296 AC068137.4-201ENST00000638485 296 ntBASIC1.41□□□□□ -2.18
TRAPPC4Q9Y296 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.41□□□□□ -2.18
TRAPPC4Q9Y296 LINC02555-201ENST00000563933 1951 ntBASIC1.41□□□□□ -2.18
TRAPPC4Q9Y296 AP000648.3-201ENST00000623539 4507 ntBASIC1.41□□□□□ -2.18
TRAPPC4Q9Y296 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.18
TRAPPC4Q9Y296 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.4□□□□□ -2.19
TRAPPC4Q9Y296 RNU6-1252P-201ENST00000363054 104 ntBASIC1.4□□□□□ -2.19
TRAPPC4Q9Y296 RNU6-23P-201ENST00000363283 107 ntBASIC1.4□□□□□ -2.19
TRAPPC4Q9Y296 SNORD31B-201ENST00000364977 69 ntBASIC1.4□□□□□ -2.19
TRAPPC4Q9Y296 RNU4-12P-201ENST00000365233 139 ntBASIC1.4□□□□□ -2.19
TRAPPC4Q9Y296 RNU6-933P-201ENST00000384424 107 ntBASIC1.4□□□□□ -2.19
TRAPPC4Q9Y296 Y_RNA.573-201ENST00000384763 105 ntBASIC1.4□□□□□ -2.19
TRAPPC4Q9Y296 SNORA12.2-201ENST00000391040 156 ntBASIC1.4□□□□□ -2.19
TRAPPC4Q9Y296 RNA5SP118-201ENST00000410385 109 ntBASIC1.4□□□□□ -2.19
TRAPPC4Q9Y296 RN7SKP51-201ENST00000410781 304 ntBASIC1.4□□□□□ -2.19
TRAPPC4Q9Y296 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.4□□□□□ -2.19
TRAPPC4Q9Y296 AL513185.2-201ENST00000425543 193 ntBASIC1.4□□□□□ -2.19
TRAPPC4Q9Y296 MTND1P11-201ENST00000456661 876 ntBASIC1.4□□□□□ -2.19
TRAPPC4Q9Y296 AC016925.1-201ENST00000458303 298 ntBASIC1.4□□□□□ -2.19
TRAPPC4Q9Y296 AC027575.1-201ENST00000481064 460 ntBASIC1.4□□□□□ -2.19
TRAPPC4Q9Y296 AF186996.7-201ENST00000492781 209 ntBASIC1.4□□□□□ -2.19
TRAPPC4Q9Y296 MTCYBP18-201ENST00000501056 747 ntBASIC1.4□□□□□ -2.19
TRAPPC4Q9Y296 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.4□□□□□ -2.19
TRAPPC4Q9Y296 AP005660.1-201ENST00000522972 293 ntBASIC1.4□□□□□ -2.19
TRAPPC4Q9Y296 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.4□□□□□ -2.19
TRAPPC4Q9Y296 MRPS36P4-201ENST00000534436 298 ntBASIC1.4□□□□□ -2.19
TRAPPC4Q9Y296 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.4□□□□□ -2.19
TRAPPC4Q9Y296 AC022254.1-201ENST00000567857 235 ntBASIC1.4□□□□□ -2.19
TRAPPC4Q9Y296 AC090517.1-201ENST00000569307 266 ntBASIC1.4□□□□□ -2.19
TRAPPC4Q9Y296 SNORD53B-201ENST00000577887 78 ntBASIC1.4□□□□□ -2.19
TRAPPC4Q9Y296 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.4□□□□□ -2.19
TRAPPC4Q9Y296 MIR3672-201ENST00000584290 82 ntBASIC1.4□□□□□ -2.19
TRAPPC4Q9Y296 AC023043.2-201ENST00000589678 1026 ntBASIC1.4□□□□□ -2.19
TRAPPC4Q9Y296 AL590240.4-201ENST00000616908 390 ntBASIC1.4□□□□□ -2.19
TRAPPC4Q9Y296 AC090617.10-201ENST00000624308 134 ntBASIC1.4□□□□□ -2.19
TRAPPC4Q9Y296 MIR3688-2-201ENST00000636963 87 ntBASIC1.4□□□□□ -2.19
TRAPPC4Q9Y296 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.39□□□□□ -2.19
TRAPPC4Q9Y296 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
TRAPPC4Q9Y296 Y_RNA.6-201ENST00000362350 114 ntBASIC1.39□□□□□ -2.19
TRAPPC4Q9Y296 Y_RNA.212-201ENST00000364177 102 ntBASIC1.39□□□□□ -2.19
TRAPPC4Q9Y296 RNU6-877P-201ENST00000383868 107 ntBASIC1.39□□□□□ -2.19
TRAPPC4Q9Y296 RNU6-968P-201ENST00000384076 107 ntBASIC1.39□□□□□ -2.19
TRAPPC4Q9Y296 MIR521-1-201ENST00000384902 87 ntBASIC1.39□□□□□ -2.19
TRAPPC4Q9Y296 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
TRAPPC4Q9Y296 SNORA48.1-201ENST00000390879 135 ntBASIC1.39□□□□□ -2.19
TRAPPC4Q9Y296 RNU6-1093P-201ENST00000391194 107 ntBASIC1.39□□□□□ -2.19
TRAPPC4Q9Y296 RNA5SP501-201ENST00000410990 112 ntBASIC1.39□□□□□ -2.19
TRAPPC4Q9Y296 AC007098.1-201ENST00000420122 367 ntBASIC1.39□□□□□ -2.19
TRAPPC4Q9Y296 AL590632.1-201ENST00000424289 371 ntBASIC1.39□□□□□ -2.19
TRAPPC4Q9Y296 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.39□□□□□ -2.19
TRAPPC4Q9Y296 HMGN2P23-201ENST00000456759 269 ntBASIC1.39□□□□□ -2.19
TRAPPC4Q9Y296 RNU1-98P-201ENST00000458992 160 ntBASIC1.39□□□□□ -2.19
TRAPPC4Q9Y296 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.39□□□□□ -2.19
TRAPPC4Q9Y296 RNU6-970P-201ENST00000516312 107 ntBASIC1.39□□□□□ -2.19
TRAPPC4Q9Y296 RNU5F-4P-201ENST00000516581 114 ntBASIC1.39□□□□□ -2.19
TRAPPC4Q9Y296 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.39□□□□□ -2.19
TRAPPC4Q9Y296 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.39□□□□□ -2.19
TRAPPC4Q9Y296 AC146944.4-201ENST00000602697 718 ntBASIC1.39□□□□□ -2.19
TRAPPC4Q9Y296 CYP2C61P-201ENST00000604072 290 ntBASIC1.39□□□□□ -2.19
TRAPPC4Q9Y296 BX248123.2-201ENST00000606318 124 ntBASIC1.39□□□□□ -2.19
TRAPPC4Q9Y296 U1.36-201ENST00000620684 176 ntBASIC1.39□□□□□ -2.19
TRAPPC4Q9Y296 AC130454.1-201ENST00000622948 401 ntBASIC1.39□□□□□ -2.19
TRAPPC4Q9Y296 AC022513.1-201ENST00000624512 117 ntBASIC1.39□□□□□ -2.19
TRAPPC4Q9Y296 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
TRAPPC4Q9Y296 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
TRAPPC4Q9Y296 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms