Protein–RNA interactions for Protein: Q9UQD0

SCN8A, Sodium channel protein type 8 subunit alpha, humanhuman

Predictions only

Length 1,980 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8AQ9UQD0 AL356583.2-201ENST00000426536 280 ntBASIC0.32□□□□□ -2.36
SCN8AQ9UQD0 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC0.32□□□□□ -2.36
SCN8AQ9UQD0 RNU6-1041P-201ENST00000516254 102 ntBASIC0.32□□□□□ -2.36
SCN8AQ9UQD0 AC106038.2-201ENST00000520706 568 ntBASIC0.32□□□□□ -2.36
SCN8AQ9UQD0 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC0.32□□□□□ -2.36
SCN8AQ9UQD0 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC0.32□□□□□ -2.36
SCN8AQ9UQD0 MIR5695-201ENST00000579717 85 ntBASIC0.32□□□□□ -2.36
SCN8AQ9UQD0 AC093913.1-201ENST00000614178 329 ntBASIC0.32□□□□□ -2.36
SCN8AQ9UQD0 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.32□□□□□ -2.36
SCN8AQ9UQD0 AL136221.1-201ENST00000621449 509 ntBASIC0.32□□□□□ -2.36
SCN8AQ9UQD0 AL359697.1-201ENST00000624879 587 ntBASIC0.32□□□□□ -2.36
SCN8AQ9UQD0 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.32□□□□□ -2.36
SCN8AQ9UQD0 MIR653-201ENST00000385279 96 ntBASIC0.31□□□□□ -2.36
SCN8AQ9UQD0 RPS29P13-201ENST00000402041 169 ntBASIC0.31□□□□□ -2.36
SCN8AQ9UQD0 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.31□□□□□ -2.36
SCN8AQ9UQD0 AC019070.1-201ENST00000415008 1024 ntBASIC0.31□□□□□ -2.36
SCN8AQ9UQD0 AC092423.1-201ENST00000430165 186 ntBASIC0.31□□□□□ -2.36
SCN8AQ9UQD0 AL606517.2-201ENST00000442855 241 ntBASIC0.31□□□□□ -2.36
SCN8AQ9UQD0 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.31□□□□□ -2.36
SCN8AQ9UQD0 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.31□□□□□ -2.36
SCN8AQ9UQD0 AC098869.1-201ENST00000481627 292 ntBASIC0.31□□□□□ -2.36
SCN8AQ9UQD0 RNU4-54P-201ENST00000516428 129 ntBASIC0.31□□□□□ -2.36
SCN8AQ9UQD0 AC022868.1-201ENST00000517767 391 ntBASIC0.31□□□□□ -2.36
SCN8AQ9UQD0 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.31□□□□□ -2.36
SCN8AQ9UQD0 MIR4307-201ENST00000582802 84 ntBASIC0.31□□□□□ -2.36
SCN8AQ9UQD0 AC146944.4-201ENST00000602697 718 ntBASIC0.31□□□□□ -2.36
SCN8AQ9UQD0 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.31□□□□□ -2.36
SCN8AQ9UQD0 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
SCN8AQ9UQD0 U3.9-201ENST00000363823 204 ntBASIC0.3□□□□□ -2.36
SCN8AQ9UQD0 RNU6-969P-201ENST00000383900 105 ntBASIC0.3□□□□□ -2.36
SCN8AQ9UQD0 RNU6-692P-201ENST00000384496 107 ntBASIC0.3□□□□□ -2.36
SCN8AQ9UQD0 MTCO2P29-201ENST00000465212 189 ntBASIC0.3□□□□□ -2.36
SCN8AQ9UQD0 RNA5SP121-201ENST00000516537 101 ntBASIC0.3□□□□□ -2.36
SCN8AQ9UQD0 AC090049.2-201ENST00000550377 109 ntBASIC0.3□□□□□ -2.36
SCN8AQ9UQD0 AC064807.4-201ENST00000607201 407 ntBASIC0.3□□□□□ -2.36
SCN8AQ9UQD0 AL451064.1-201ENST00000607718 471 ntBASIC0.3□□□□□ -2.36
SCN8AQ9UQD0 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.3□□□□□ -2.36
SCN8AQ9UQD0 AC131159.1-201ENST00000621854 213 ntBASIC0.3□□□□□ -2.36
SCN8AQ9UQD0 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.3□□□□□ -2.36
SCN8AQ9UQD0 SNORD56.2-201ENST00000363242 71 ntBASIC0.3□□□□□ -2.36
SCN8AQ9UQD0 SNORD116-13-201ENST00000384408 92 ntBASIC0.3□□□□□ -2.36
SCN8AQ9UQD0 SNORA80D-201ENST00000384488 135 ntBASIC0.3□□□□□ -2.36
SCN8AQ9UQD0 RNU6-417P-201ENST00000384712 107 ntBASIC0.3□□□□□ -2.36
SCN8AQ9UQD0 MIR300-201ENST00000401138 83 ntBASIC0.3□□□□□ -2.36
SCN8AQ9UQD0 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.3□□□□□ -2.36
SCN8AQ9UQD0 AC245047.3-201ENST00000429428 127 ntBASIC0.3□□□□□ -2.36
SCN8AQ9UQD0 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.3□□□□□ -2.36
SCN8AQ9UQD0 HSFY7P-201ENST00000432672 318 ntBASIC0.3□□□□□ -2.36
SCN8AQ9UQD0 HSFY8P-201ENST00000437934 318 ntBASIC0.3□□□□□ -2.36
SCN8AQ9UQD0 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.3□□□□□ -2.36
SCN8AQ9UQD0 RNA5SP476-201ENST00000516613 103 ntBASIC0.3□□□□□ -2.36
SCN8AQ9UQD0 RNU6-685P-201ENST00000517088 95 ntBASIC0.3□□□□□ -2.36
SCN8AQ9UQD0 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.3□□□□□ -2.36
SCN8AQ9UQD0 AC008521.1-201ENST00000587471 187 ntBASIC0.3□□□□□ -2.36
SCN8AQ9UQD0 AP001596.2-201ENST00000608410 312 ntBASIC0.3□□□□□ -2.36
SCN8AQ9UQD0 MIR6718-201ENST00000616153 80 ntBASIC0.3□□□□□ -2.36
SCN8AQ9UQD0 AL513423.1-201ENST00000621695 132 ntBASIC0.3□□□□□ -2.36
SCN8AQ9UQD0 AC068647.2-201ENST00000637380 353 ntBASIC0.3□□□□□ -2.36
SCN8AQ9UQD0 RNU4-12P-201ENST00000365233 139 ntBASIC0.29□□□□□ -2.36
SCN8AQ9UQD0 Y_RNA.476-201ENST00000384347 108 ntBASIC0.29□□□□□ -2.36
SCN8AQ9UQD0 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.29□□□□□ -2.36
SCN8AQ9UQD0 AL451046.2-201ENST00000403074 277 ntBASIC0.29□□□□□ -2.36
SCN8AQ9UQD0 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.29□□□□□ -2.36
SCN8AQ9UQD0 AL590135.1-201ENST00000422215 156 ntBASIC0.29□□□□□ -2.36
SCN8AQ9UQD0 AC019205.3-201ENST00000424573 156 ntBASIC0.29□□□□□ -2.36
SCN8AQ9UQD0 HMGN2P34-201ENST00000437647 269 ntBASIC0.29□□□□□ -2.36
SCN8AQ9UQD0 AC016700.2-201ENST00000446011 156 ntBASIC0.29□□□□□ -2.36
SCN8AQ9UQD0 AC015911.1-201ENST00000495111 156 ntBASIC0.29□□□□□ -2.36
SCN8AQ9UQD0 AC109479.2-201ENST00000517842 174 ntBASIC0.29□□□□□ -2.36
SCN8AQ9UQD0 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.29□□□□□ -2.36
SCN8AQ9UQD0 MTND1P15-201ENST00000579262 949 ntBASIC0.29□□□□□ -2.36
SCN8AQ9UQD0 MIR4742-201ENST00000581069 85 ntBASIC0.29□□□□□ -2.36
SCN8AQ9UQD0 MIR4753-201ENST00000585119 83 ntBASIC0.29□□□□□ -2.36
SCN8AQ9UQD0 AC013244.3-201ENST00000605614 388 ntBASIC0.29□□□□□ -2.36
SCN8AQ9UQD0 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.29□□□□□ -2.36
SCN8AQ9UQD0 PART1_2.1-201ENST00000612397 250 ntBASIC0.29□□□□□ -2.36
SCN8AQ9UQD0 AC116165.2-201ENST00000616705 206 ntBASIC0.29□□□□□ -2.36
SCN8AQ9UQD0 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
SCN8AQ9UQD0 RNA5SP127-201ENST00000411051 133 ntBASIC0.28□□□□□ -2.36
SCN8AQ9UQD0 USP9YP28-201ENST00000435142 589 ntBASIC0.28□□□□□ -2.36
SCN8AQ9UQD0 RPL37P21-201ENST00000435890 276 ntBASIC0.28□□□□□ -2.36
SCN8AQ9UQD0 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC0.28□□□□□ -2.36
SCN8AQ9UQD0 FABP5P4-201ENST00000437203 171 ntBASIC0.28□□□□□ -2.36
SCN8AQ9UQD0 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.28□□□□□ -2.36
SCN8AQ9UQD0 AC104136.1-201ENST00000512969 394 ntBASIC0.28□□□□□ -2.36
SCN8AQ9UQD0 AP002001.1-203ENST00000534002 267 ntBASIC0.28□□□□□ -2.36
SCN8AQ9UQD0 TPRKBP2-201ENST00000565969 475 ntBASIC0.28□□□□□ -2.36
SCN8AQ9UQD0 SNORA59B-202ENST00000578183 701 ntBASIC0.28□□□□□ -2.36
SCN8AQ9UQD0 Z98751.3-201ENST00000604447 521 ntBASIC0.28□□□□□ -2.36
SCN8AQ9UQD0 Y_RNA.363-201ENST00000365529 113 ntBASIC0.28□□□□□ -2.36
SCN8AQ9UQD0 RNU6-641P-201ENST00000384006 107 ntBASIC0.28□□□□□ -2.36
SCN8AQ9UQD0 SNORD89-201ENST00000390981 114 ntBASIC0.28□□□□□ -2.36
SCN8AQ9UQD0 ELOCP4-201ENST00000420090 333 ntBASIC0.28□□□□□ -2.36
SCN8AQ9UQD0 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.28□□□□□ -2.36
SCN8AQ9UQD0 AC022364.2-201ENST00000457963 554 ntBASIC0.28□□□□□ -2.36
SCN8AQ9UQD0 RNU4-57P-201ENST00000515980 135 ntBASIC0.28□□□□□ -2.36
SCN8AQ9UQD0 SNORD111.1-201ENST00000516421 86 ntBASIC0.28□□□□□ -2.36
SCN8AQ9UQD0 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.28□□□□□ -2.36
SCN8AQ9UQD0 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.28□□□□□ -2.36
SCN8AQ9UQD0 MIR4667-201ENST00000578933 66 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 137.8 ms