Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 RNU6-1210P-201ENST00000363775 107 ntBASIC3.7□□□□□ -1.82
CDK11AQ9UQ88 RNU6-99P-201ENST00000364721 107 ntBASIC3.7□□□□□ -1.82
CDK11AQ9UQ88 MIR186-201ENST00000384988 86 ntBASIC3.7□□□□□ -1.82
CDK11AQ9UQ88 MIR625-201ENST00000385047 85 ntBASIC3.7□□□□□ -1.82
CDK11AQ9UQ88 SNORA26.3-201ENST00000391119 136 ntBASIC3.7□□□□□ -1.82
CDK11AQ9UQ88 RNA5SP494-201ENST00000410653 129 ntBASIC3.7□□□□□ -1.82
CDK11AQ9UQ88 AL358453.1-201ENST00000422522 250 ntBASIC3.7□□□□□ -1.82
CDK11AQ9UQ88 AC018865.2-201ENST00000423631 129 ntBASIC3.7□□□□□ -1.82
CDK11AQ9UQ88 snoU13.30-201ENST00000458951 104 ntBASIC3.7□□□□□ -1.82
CDK11AQ9UQ88 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.7□□□□□ -1.82
CDK11AQ9UQ88 RPL23AP75-201ENST00000491601 451 ntBASIC3.7□□□□□ -1.82
CDK11AQ9UQ88 HMGB3P3-201ENST00000510526 400 ntBASIC3.7□□□□□ -1.82
CDK11AQ9UQ88 RNU6-120P-201ENST00000516077 103 ntBASIC3.7□□□□□ -1.82
CDK11AQ9UQ88 AC104581.2-201ENST00000572227 430 ntBASIC3.7□□□□□ -1.82
CDK11AQ9UQ88 AC100812.1-201ENST00000607622 580 ntBASIC3.7□□□□□ -1.82
CDK11AQ9UQ88 Y_RNA.812-201ENST00000610788 101 ntBASIC3.7□□□□□ -1.82
CDK11AQ9UQ88 Y_RNA.784-201ENST00000613803 101 ntBASIC3.7□□□□□ -1.82
CDK11AQ9UQ88 Y_RNA.787-201ENST00000616522 101 ntBASIC3.7□□□□□ -1.82
CDK11AQ9UQ88 Y_RNA.780-201ENST00000617336 101 ntBASIC3.7□□□□□ -1.82
CDK11AQ9UQ88 Y_RNA.801-201ENST00000619005 101 ntBASIC3.7□□□□□ -1.82
CDK11AQ9UQ88 MTND5P6-201ENST00000422338 1798 ntBASIC3.7□□□□□ -1.82
CDK11AQ9UQ88 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.7□□□□□ -1.82
CDK11AQ9UQ88 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CDK11AQ9UQ88 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CDK11AQ9UQ88 SNORD114-1-201ENST00000362705 72 ntBASIC3.69□□□□□ -1.82
CDK11AQ9UQ88 RNU6-1159P-201ENST00000362933 107 ntBASIC3.69□□□□□ -1.82
CDK11AQ9UQ88 RNU1-138P-201ENST00000384093 164 ntBASIC3.69□□□□□ -1.82
CDK11AQ9UQ88 RNU6-1156P-201ENST00000410365 100 ntBASIC3.69□□□□□ -1.82
CDK11AQ9UQ88 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.69□□□□□ -1.82
CDK11AQ9UQ88 AL163540.1-201ENST00000485382 386 ntBASIC3.69□□□□□ -1.82
CDK11AQ9UQ88 AC021146.2-201ENST00000504736 556 ntBASIC3.69□□□□□ -1.82
CDK11AQ9UQ88 DEFB122-202ENST00000569013 197 ntBASIC3.69□□□□□ -1.82
CDK11AQ9UQ88 MIR5007-201ENST00000583098 95 ntBASIC3.69□□□□□ -1.82
CDK11AQ9UQ88 AL356575.1-201ENST00000603008 283 ntBASIC3.69□□□□□ -1.82
CDK11AQ9UQ88 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.69□□□□□ -1.82
CDK11AQ9UQ88 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.69□□□□□ -1.82
CDK11AQ9UQ88 SNORD98-201ENST00000636377 67 ntBASIC3.69□□□□□ -1.82
CDK11AQ9UQ88 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
CDK11AQ9UQ88 AC069528.2-201ENST00000624849 1991 ntBASIC3.69□□□□□ -1.82
CDK11AQ9UQ88 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
CDK11AQ9UQ88 AC092881.1-201ENST00000638218 2733 ntBASIC3.68□□□□□ -1.82
CDK11AQ9UQ88 RNU1-91P-201ENST00000364746 163 ntBASIC3.68□□□□□ -1.82
CDK11AQ9UQ88 RNU1-115P-201ENST00000365329 160 ntBASIC3.68□□□□□ -1.82
CDK11AQ9UQ88 AC008267.5-201ENST00000424928 265 ntBASIC3.68□□□□□ -1.82
CDK11AQ9UQ88 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.68□□□□□ -1.82
CDK11AQ9UQ88 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.68□□□□□ -1.82
CDK11AQ9UQ88 AC140059.1-201ENST00000489238 361 ntBASIC3.68□□□□□ -1.82
CDK11AQ9UQ88 RNU5F-2P-201ENST00000516066 82 ntBASIC3.68□□□□□ -1.82
CDK11AQ9UQ88 RNU2-53P-201ENST00000516257 147 ntBASIC3.68□□□□□ -1.82
CDK11AQ9UQ88 Y_RNA.706-201ENST00000516933 99 ntBASIC3.68□□□□□ -1.82
CDK11AQ9UQ88 Y_RNA.711-201ENST00000516993 102 ntBASIC3.68□□□□□ -1.82
CDK11AQ9UQ88 AC144568.1-201ENST00000520139 137 ntBASIC3.68□□□□□ -1.82
CDK11AQ9UQ88 AP003072.1-201ENST00000531740 145 ntBASIC3.68□□□□□ -1.82
CDK11AQ9UQ88 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC3.68□□□□□ -1.82
CDK11AQ9UQ88 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.68□□□□□ -1.82
CDK11AQ9UQ88 AC245884.12-201ENST00000615364 59 ntBASIC3.68□□□□□ -1.82
CDK11AQ9UQ88 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CDK11AQ9UQ88 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CDK11AQ9UQ88 Y_RNA.28-201ENST00000362554 111 ntBASIC3.67□□□□□ -1.82
CDK11AQ9UQ88 RNU1-72P-201ENST00000362976 153 ntBASIC3.67□□□□□ -1.82
CDK11AQ9UQ88 RNU5B-2P-201ENST00000363036 113 ntBASIC3.67□□□□□ -1.82
CDK11AQ9UQ88 SNORD115-32-201ENST00000364079 82 ntBASIC3.67□□□□□ -1.82
CDK11AQ9UQ88 Y_RNA.314-201ENST00000365114 102 ntBASIC3.67□□□□□ -1.82
CDK11AQ9UQ88 AC117470.1-201ENST00000381974 330 ntBASIC3.67□□□□□ -1.82
CDK11AQ9UQ88 SNORA12.2-201ENST00000391040 156 ntBASIC3.67□□□□□ -1.82
CDK11AQ9UQ88 AL079342.1-201ENST00000401460 267 ntBASIC3.67□□□□□ -1.82
CDK11AQ9UQ88 AC012306.1-201ENST00000423267 114 ntBASIC3.67□□□□□ -1.82
CDK11AQ9UQ88 AC092423.1-201ENST00000430165 186 ntBASIC3.67□□□□□ -1.82
CDK11AQ9UQ88 Y_RNA.638-201ENST00000459374 113 ntBASIC3.67□□□□□ -1.82
CDK11AQ9UQ88 AC073901.1-201ENST00000462471 408 ntBASIC3.67□□□□□ -1.82
CDK11AQ9UQ88 AC087477.1-201ENST00000465747 340 ntBASIC3.67□□□□□ -1.82
CDK11AQ9UQ88 HMGB1P35-201ENST00000503360 598 ntBASIC3.67□□□□□ -1.82
CDK11AQ9UQ88 RN7SKP295-201ENST00000517264 153 ntBASIC3.67□□□□□ -1.82
CDK11AQ9UQ88 CBX3P7-201ENST00000532876 502 ntBASIC3.67□□□□□ -1.82
CDK11AQ9UQ88 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC3.67□□□□□ -1.82
CDK11AQ9UQ88 SNORD14A-201ENST00000606526 91 ntBASIC3.67□□□□□ -1.82
CDK11AQ9UQ88 AC067747.1-201ENST00000608026 250 ntBASIC3.67□□□□□ -1.82
CDK11AQ9UQ88 RMST_6.1-201ENST00000611980 203 ntBASIC3.67□□□□□ -1.82
CDK11AQ9UQ88 AC083806.3-201ENST00000614016 455 ntBASIC3.67□□□□□ -1.82
CDK11AQ9UQ88 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.67□□□□□ -1.82
CDK11AQ9UQ88 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CDK11AQ9UQ88 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CDK11AQ9UQ88 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.66□□□□□ -1.82
CDK11AQ9UQ88 ZNF271P-202ENST00000465539 1970 ntBASIC3.66□□□□□ -1.82
CDK11AQ9UQ88 Y_RNA.422-201ENST00000384054 114 ntBASIC3.66□□□□□ -1.82
CDK11AQ9UQ88 CBX3P9-201ENST00000402326 552 ntBASIC3.66□□□□□ -1.82
CDK11AQ9UQ88 MIR1289-2-201ENST00000408360 111 ntBASIC3.66□□□□□ -1.82
CDK11AQ9UQ88 PMCHL1-202ENST00000423102 261 ntBASIC3.66□□□□□ -1.82
CDK11AQ9UQ88 AIMP1P2-201ENST00000425294 312 ntBASIC3.66□□□□□ -1.82
CDK11AQ9UQ88 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.66□□□□□ -1.82
CDK11AQ9UQ88 AC091144.1-201ENST00000519573 138 ntBASIC3.66□□□□□ -1.82
CDK11AQ9UQ88 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.66□□□□□ -1.82
CDK11AQ9UQ88 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.66□□□□□ -1.82
CDK11AQ9UQ88 AL034555.1-201ENST00000604816 211 ntBASIC3.66□□□□□ -1.82
CDK11AQ9UQ88 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.66□□□□□ -1.82
CDK11AQ9UQ88 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.65□□□□□ -1.83
CDK11AQ9UQ88 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
CDK11AQ9UQ88 Y_RNA.40-201ENST00000362645 93 ntBASIC3.65□□□□□ -1.83
CDK11AQ9UQ88 Y_RNA.326-201ENST00000365176 113 ntBASIC3.65□□□□□ -1.83
CDK11AQ9UQ88 Y_RNA.405-201ENST00000383979 100 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms