Protein–RNA interactions for Protein: Q9UPN6

SCAF8, Protein SCAF8, humanhuman

Known RBP Predictions only

Length 1,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8Q9UPN6 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.97□□□□□ -1.93
SCAF8Q9UPN6 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SCAF8Q9UPN6 AC069528.2-201ENST00000624849 1991 ntBASIC2.96□□□□□ -1.94
SCAF8Q9UPN6 RNU6-529P-201ENST00000363383 104 ntBASIC2.96□□□□□ -1.94
SCAF8Q9UPN6 Y_RNA.152-201ENST00000363578 100 ntBASIC2.96□□□□□ -1.94
SCAF8Q9UPN6 RNU6-784P-201ENST00000384330 106 ntBASIC2.96□□□□□ -1.94
SCAF8Q9UPN6 MT-TG-201ENST00000387429 68 ntBASIC2.96□□□□□ -1.94
SCAF8Q9UPN6 RNU6-700P-201ENST00000391043 107 ntBASIC2.96□□□□□ -1.94
SCAF8Q9UPN6 FO393413.1-201ENST00000402892 195 ntBASIC2.96□□□□□ -1.94
SCAF8Q9UPN6 U6atac.2-201ENST00000408644 118 ntBASIC2.96□□□□□ -1.94
SCAF8Q9UPN6 RNA5SP494-201ENST00000410653 129 ntBASIC2.96□□□□□ -1.94
SCAF8Q9UPN6 Y_RNA.618-201ENST00000410949 107 ntBASIC2.96□□□□□ -1.94
SCAF8Q9UPN6 AC007098.1-201ENST00000420122 367 ntBASIC2.96□□□□□ -1.94
SCAF8Q9UPN6 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.96□□□□□ -1.94
SCAF8Q9UPN6 Z98742.2-201ENST00000431564 187 ntBASIC2.96□□□□□ -1.94
SCAF8Q9UPN6 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.96□□□□□ -1.94
SCAF8Q9UPN6 AC108059.2-201ENST00000434626 151 ntBASIC2.96□□□□□ -1.94
SCAF8Q9UPN6 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.96□□□□□ -1.94
SCAF8Q9UPN6 AL603825.1-201ENST00000438481 80 ntBASIC2.96□□□□□ -1.94
SCAF8Q9UPN6 RPL30P10-201ENST00000488148 337 ntBASIC2.96□□□□□ -1.94
SCAF8Q9UPN6 AC108210.2-201ENST00000503681 201 ntBASIC2.96□□□□□ -1.94
SCAF8Q9UPN6 RNU6-826P-201ENST00000516827 104 ntBASIC2.96□□□□□ -1.94
SCAF8Q9UPN6 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.96□□□□□ -1.94
SCAF8Q9UPN6 MIR3605-201ENST00000583214 100 ntBASIC2.96□□□□□ -1.94
SCAF8Q9UPN6 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.96□□□□□ -1.94
SCAF8Q9UPN6 MTND5P6-201ENST00000422338 1798 ntBASIC2.96□□□□□ -1.94
SCAF8Q9UPN6 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.96□□□□□ -1.94
SCAF8Q9UPN6 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
SCAF8Q9UPN6 AC026241.1-201ENST00000517873 2142 ntBASIC2.95□□□□□ -1.94
SCAF8Q9UPN6 Y_RNA.123-201ENST00000363338 102 ntBASIC2.95□□□□□ -1.94
SCAF8Q9UPN6 Y_RNA.556-201ENST00000384677 113 ntBASIC2.95□□□□□ -1.94
SCAF8Q9UPN6 MIR544A-201ENST00000384855 91 ntBASIC2.95□□□□□ -1.94
SCAF8Q9UPN6 RN7SKP61-201ENST00000410642 295 ntBASIC2.95□□□□□ -1.94
SCAF8Q9UPN6 CBX3P6-201ENST00000430257 527 ntBASIC2.95□□□□□ -1.94
SCAF8Q9UPN6 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.95□□□□□ -1.94
SCAF8Q9UPN6 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.95□□□□□ -1.94
SCAF8Q9UPN6 RPL39P29-201ENST00000447779 157 ntBASIC2.95□□□□□ -1.94
SCAF8Q9UPN6 MTCO3P8-201ENST00000453691 755 ntBASIC2.95□□□□□ -1.94
SCAF8Q9UPN6 AC080013.2-201ENST00000460866 323 ntBASIC2.95□□□□□ -1.94
SCAF8Q9UPN6 SCARNA3-201ENST00000517097 143 ntBASIC2.95□□□□□ -1.94
SCAF8Q9UPN6 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.95□□□□□ -1.94
SCAF8Q9UPN6 MYL12BP1-201ENST00000569826 507 ntBASIC2.95□□□□□ -1.94
SCAF8Q9UPN6 AC103810.1-201ENST00000579873 453 ntBASIC2.95□□□□□ -1.94
SCAF8Q9UPN6 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.95□□□□□ -1.94
SCAF8Q9UPN6 AC100812.1-201ENST00000607622 580 ntBASIC2.95□□□□□ -1.94
SCAF8Q9UPN6 AC090425.1-201ENST00000610007 140 ntBASIC2.95□□□□□ -1.94
SCAF8Q9UPN6 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.95□□□□□ -1.94
SCAF8Q9UPN6 AL449363.1-201ENST00000617815 186 ntBASIC2.95□□□□□ -1.94
SCAF8Q9UPN6 U2.1-201ENST00000618978 145 ntBASIC2.95□□□□□ -1.94
SCAF8Q9UPN6 AL159153.1-201ENST00000619688 317 ntBASIC2.95□□□□□ -1.94
SCAF8Q9UPN6 Z75746.1-201ENST00000440243 2080 ntBASIC2.95□□□□□ -1.94
SCAF8Q9UPN6 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.94□□□□□ -1.94
SCAF8Q9UPN6 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
SCAF8Q9UPN6 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
SCAF8Q9UPN6 RNU6-874P-201ENST00000362390 105 ntBASIC2.94□□□□□ -1.94
SCAF8Q9UPN6 RNU1-57P-201ENST00000384491 166 ntBASIC2.94□□□□□ -1.94
SCAF8Q9UPN6 SNORA69.1-201ENST00000390904 137 ntBASIC2.94□□□□□ -1.94
SCAF8Q9UPN6 RPL21P1-201ENST00000399532 476 ntBASIC2.94□□□□□ -1.94
SCAF8Q9UPN6 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.94□□□□□ -1.94
SCAF8Q9UPN6 RN7SKP192-201ENST00000411291 327 ntBASIC2.94□□□□□ -1.94
SCAF8Q9UPN6 EIF1AXP1-201ENST00000419267 435 ntBASIC2.94□□□□□ -1.94
SCAF8Q9UPN6 RPL23AP95-201ENST00000426806 265 ntBASIC2.94□□□□□ -1.94
SCAF8Q9UPN6 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.94□□□□□ -1.94
SCAF8Q9UPN6 DYNLT3P2-201ENST00000442517 295 ntBASIC2.94□□□□□ -1.94
SCAF8Q9UPN6 AC073910.1-201ENST00000445047 438 ntBASIC2.94□□□□□ -1.94
SCAF8Q9UPN6 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.94□□□□□ -1.94
SCAF8Q9UPN6 AL590705.4-201ENST00000532209 134 ntBASIC2.94□□□□□ -1.94
SCAF8Q9UPN6 AC021269.2-201ENST00000532318 330 ntBASIC2.94□□□□□ -1.94
SCAF8Q9UPN6 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.94□□□□□ -1.94
SCAF8Q9UPN6 AC073410.2-201ENST00000603240 332 ntBASIC2.94□□□□□ -1.94
SCAF8Q9UPN6 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.94□□□□□ -1.94
SCAF8Q9UPN6 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SCAF8Q9UPN6 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
SCAF8Q9UPN6 Y_RNA.188-201ENST00000363952 111 ntBASIC2.93□□□□□ -1.94
SCAF8Q9UPN6 SNORA63.7-201ENST00000365579 123 ntBASIC2.93□□□□□ -1.94
SCAF8Q9UPN6 SNORA51.11-201ENST00000384442 131 ntBASIC2.93□□□□□ -1.94
SCAF8Q9UPN6 Y_RNA.551-201ENST00000384661 102 ntBASIC2.93□□□□□ -1.94
SCAF8Q9UPN6 AL079342.1-201ENST00000401460 267 ntBASIC2.93□□□□□ -1.94
SCAF8Q9UPN6 AL359511.1-201ENST00000402970 211 ntBASIC2.93□□□□□ -1.94
SCAF8Q9UPN6 Y_RNA.592-201ENST00000410274 109 ntBASIC2.93□□□□□ -1.94
SCAF8Q9UPN6 HMGN2P35-201ENST00000412164 270 ntBASIC2.93□□□□□ -1.94
SCAF8Q9UPN6 MTCO3P29-201ENST00000432119 779 ntBASIC2.93□□□□□ -1.94
SCAF8Q9UPN6 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.93□□□□□ -1.94
SCAF8Q9UPN6 RPS15AP7-201ENST00000439294 405 ntBASIC2.93□□□□□ -1.94
SCAF8Q9UPN6 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.93□□□□□ -1.94
SCAF8Q9UPN6 Y_RNA.668-201ENST00000516233 93 ntBASIC2.93□□□□□ -1.94
SCAF8Q9UPN6 AC097372.5-201ENST00000623665 376 ntBASIC2.93□□□□□ -1.94
SCAF8Q9UPN6 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
SCAF8Q9UPN6 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SCAF8Q9UPN6 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
SCAF8Q9UPN6 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
SCAF8Q9UPN6 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.93□□□□□ -1.94
SCAF8Q9UPN6 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
SCAF8Q9UPN6 AC092268.1-201ENST00000342691 405 ntBASIC2.92□□□□□ -1.94
SCAF8Q9UPN6 RNU6-1285P-201ENST00000363480 105 ntBASIC2.92□□□□□ -1.94
SCAF8Q9UPN6 Y_RNA.214-201ENST00000364201 112 ntBASIC2.92□□□□□ -1.94
SCAF8Q9UPN6 SNORD32A-201ENST00000364805 84 ntBASIC2.92□□□□□ -1.94
SCAF8Q9UPN6 RNU6-1318P-201ENST00000365389 103 ntBASIC2.92□□□□□ -1.94
SCAF8Q9UPN6 RNU6-142P-201ENST00000384019 107 ntBASIC2.92□□□□□ -1.94
SCAF8Q9UPN6 Y_RNA.526-201ENST00000384572 110 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms