Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.39□□□□□ -2.19
CDH9Q9ULB4 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.39□□□□□ -2.19
CDH9Q9ULB4 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.39□□□□□ -2.19
CDH9Q9ULB4 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.39□□□□□ -2.19
CDH9Q9ULB4 AL354950.2-201ENST00000617939 290 ntBASIC1.39□□□□□ -2.19
CDH9Q9ULB4 AC090582.1-201ENST00000636321 199 ntBASIC1.39□□□□□ -2.19
CDH9Q9ULB4 AC010615.1-201ENST00000594254 1764 ntBASIC1.39□□□□□ -2.19
CDH9Q9ULB4 RNU1-62P-201ENST00000362599 164 ntBASIC1.38□□□□□ -2.19
CDH9Q9ULB4 RNU6-271P-201ENST00000363858 105 ntBASIC1.38□□□□□ -2.19
CDH9Q9ULB4 MIR758-201ENST00000390227 88 ntBASIC1.38□□□□□ -2.19
CDH9Q9ULB4 SNORA40.6-201ENST00000391153 128 ntBASIC1.38□□□□□ -2.19
CDH9Q9ULB4 RNU6-1158P-201ENST00000391167 107 ntBASIC1.38□□□□□ -2.19
CDH9Q9ULB4 ARL5AP1-201ENST00000418991 388 ntBASIC1.38□□□□□ -2.19
CDH9Q9ULB4 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.38□□□□□ -2.19
CDH9Q9ULB4 FTH1P12-201ENST00000432137 551 ntBASIC1.38□□□□□ -2.19
CDH9Q9ULB4 AC245047.4-201ENST00000433189 144 ntBASIC1.38□□□□□ -2.19
CDH9Q9ULB4 AL121601.2-201ENST00000438019 707 ntBASIC1.38□□□□□ -2.19
CDH9Q9ULB4 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.38□□□□□ -2.19
CDH9Q9ULB4 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.38□□□□□ -2.19
CDH9Q9ULB4 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.38□□□□□ -2.19
CDH9Q9ULB4 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.38□□□□□ -2.19
CDH9Q9ULB4 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CDH9Q9ULB4 AC087683.1-201ENST00000591187 441 ntBASIC1.38□□□□□ -2.19
CDH9Q9ULB4 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.38□□□□□ -2.19
CDH9Q9ULB4 AC073648.5-201ENST00000603502 305 ntBASIC1.38□□□□□ -2.19
CDH9Q9ULB4 AC245008.1-201ENST00000608123 476 ntBASIC1.38□□□□□ -2.19
CDH9Q9ULB4 MIR7974-201ENST00000615835 79 ntBASIC1.38□□□□□ -2.19
CDH9Q9ULB4 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
CDH9Q9ULB4 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
CDH9Q9ULB4 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
CDH9Q9ULB4 Y_RNA.51-201ENST00000362725 102 ntBASIC1.37□□□□□ -2.19
CDH9Q9ULB4 RNU6-562P-201ENST00000362731 107 ntBASIC1.37□□□□□ -2.19
CDH9Q9ULB4 RNU6-227P-201ENST00000362865 103 ntBASIC1.37□□□□□ -2.19
CDH9Q9ULB4 RNU6-1019P-201ENST00000364424 107 ntBASIC1.37□□□□□ -2.19
CDH9Q9ULB4 Y_RNA.255-201ENST00000364581 97 ntBASIC1.37□□□□□ -2.19
CDH9Q9ULB4 Y_RNA.327-201ENST00000365201 102 ntBASIC1.37□□□□□ -2.19
CDH9Q9ULB4 SNORA18.2-201ENST00000383865 132 ntBASIC1.37□□□□□ -2.19
CDH9Q9ULB4 RNU6-877P-201ENST00000383868 107 ntBASIC1.37□□□□□ -2.19
CDH9Q9ULB4 RNU6-1119P-201ENST00000384349 108 ntBASIC1.37□□□□□ -2.19
CDH9Q9ULB4 RNY3P9-201ENST00000384727 106 ntBASIC1.37□□□□□ -2.19
CDH9Q9ULB4 RNU2-7P-201ENST00000410794 178 ntBASIC1.37□□□□□ -2.19
CDH9Q9ULB4 MTND1P29-201ENST00000448112 647 ntBASIC1.37□□□□□ -2.19
CDH9Q9ULB4 AC245517.4-201ENST00000448601 281 ntBASIC1.37□□□□□ -2.19
CDH9Q9ULB4 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.37□□□□□ -2.19
CDH9Q9ULB4 RPS29P23-201ENST00000458635 123 ntBASIC1.37□□□□□ -2.19
CDH9Q9ULB4 snoU13.30-201ENST00000458951 104 ntBASIC1.37□□□□□ -2.19
CDH9Q9ULB4 AC005840.1-201ENST00000498412 377 ntBASIC1.37□□□□□ -2.19
CDH9Q9ULB4 TRMT112P2-201ENST00000512910 132 ntBASIC1.37□□□□□ -2.19
CDH9Q9ULB4 RNA5SP445-201ENST00000515889 115 ntBASIC1.37□□□□□ -2.19
CDH9Q9ULB4 RNU6-856P-201ENST00000516959 98 ntBASIC1.37□□□□□ -2.19
CDH9Q9ULB4 RNA5SP437-201ENST00000517249 129 ntBASIC1.37□□□□□ -2.19
CDH9Q9ULB4 AC084364.2-201ENST00000546924 395 ntBASIC1.37□□□□□ -2.19
CDH9Q9ULB4 CTHRC1P1-201ENST00000605383 469 ntBASIC1.37□□□□□ -2.19
CDH9Q9ULB4 PRR13P7-201ENST00000605538 430 ntBASIC1.37□□□□□ -2.19
CDH9Q9ULB4 RN7SKP299-201ENST00000606679 301 ntBASIC1.37□□□□□ -2.19
CDH9Q9ULB4 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.37□□□□□ -2.19
CDH9Q9ULB4 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.36□□□□□ -2.19
CDH9Q9ULB4 RNU6-545P-201ENST00000362681 104 ntBASIC1.36□□□□□ -2.19
CDH9Q9ULB4 RNU1-96P-201ENST00000364163 162 ntBASIC1.36□□□□□ -2.19
CDH9Q9ULB4 MIR300-201ENST00000401138 83 ntBASIC1.36□□□□□ -2.19
CDH9Q9ULB4 USP9YP14-201ENST00000430663 563 ntBASIC1.36□□□□□ -2.19
CDH9Q9ULB4 Z83846.1-201ENST00000446798 265 ntBASIC1.36□□□□□ -2.19
CDH9Q9ULB4 snoU13.6-201ENST00000458785 104 ntBASIC1.36□□□□□ -2.19
CDH9Q9ULB4 RPS29P27-201ENST00000463711 170 ntBASIC1.36□□□□□ -2.19
CDH9Q9ULB4 RPS26P55-201ENST00000471178 356 ntBASIC1.36□□□□□ -2.19
CDH9Q9ULB4 AC108078.1-201ENST00000508073 725 ntBASIC1.36□□□□□ -2.19
CDH9Q9ULB4 RNU6-189P-201ENST00000516120 101 ntBASIC1.36□□□□□ -2.19
CDH9Q9ULB4 RNA5SP481-201ENST00000516814 122 ntBASIC1.36□□□□□ -2.19
CDH9Q9ULB4 RNU6-323P-201ENST00000521915 107 ntBASIC1.36□□□□□ -2.19
CDH9Q9ULB4 AP005597.4-201ENST00000526762 229 ntBASIC1.36□□□□□ -2.19
CDH9Q9ULB4 DEFB131C-201ENST00000528817 165 ntBASIC1.36□□□□□ -2.19
CDH9Q9ULB4 SNORA59B-202ENST00000578183 701 ntBASIC1.36□□□□□ -2.19
CDH9Q9ULB4 PIGPP4-201ENST00000584447 307 ntBASIC1.36□□□□□ -2.19
CDH9Q9ULB4 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.36□□□□□ -2.19
CDH9Q9ULB4 ICE2P2-201ENST00000483823 2787 ntBASIC1.36□□□□□ -2.19
CDH9Q9ULB4 MIR302D-201ENST00000362275 68 ntBASIC1.35□□□□□ -2.19
CDH9Q9ULB4 SNORD116-2-201ENST00000384274 95 ntBASIC1.35□□□□□ -2.19
CDH9Q9ULB4 SNORD116-6-201ENST00000384711 96 ntBASIC1.35□□□□□ -2.19
CDH9Q9ULB4 TPTE2P5-203ENST00000458118 728 ntBASIC1.35□□□□□ -2.19
CDH9Q9ULB4 HMGN2P9-201ENST00000476875 229 ntBASIC1.35□□□□□ -2.19
CDH9Q9ULB4 HMGB1P29-201ENST00000505659 499 ntBASIC1.35□□□□□ -2.19
CDH9Q9ULB4 AC067942.3-201ENST00000512025 362 ntBASIC1.35□□□□□ -2.19
CDH9Q9ULB4 RNU6-1041P-201ENST00000516254 102 ntBASIC1.35□□□□□ -2.19
CDH9Q9ULB4 RNU6-902P-201ENST00000517212 91 ntBASIC1.35□□□□□ -2.19
CDH9Q9ULB4 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.35□□□□□ -2.19
CDH9Q9ULB4 AC007684.1-201ENST00000609671 477 ntBASIC1.35□□□□□ -2.19
CDH9Q9ULB4 MIR8063-201ENST00000621930 81 ntBASIC1.35□□□□□ -2.19
CDH9Q9ULB4 AC100821.1-201ENST00000523153 2479 ntBASIC1.35□□□□□ -2.19
CDH9Q9ULB4 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.35□□□□□ -2.19
CDH9Q9ULB4 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
CDH9Q9ULB4 RNU6-82P-201ENST00000363970 107 ntBASIC1.34□□□□□ -2.19
CDH9Q9ULB4 SNORA63D-201ENST00000364359 132 ntBASIC1.34□□□□□ -2.19
CDH9Q9ULB4 RNU6-392P-201ENST00000364926 101 ntBASIC1.34□□□□□ -2.19
CDH9Q9ULB4 SNORD1A-201ENST00000364968 72 ntBASIC1.34□□□□□ -2.19
CDH9Q9ULB4 Y_RNA.381-201ENST00000365666 102 ntBASIC1.34□□□□□ -2.19
CDH9Q9ULB4 RNU6-418P-201ENST00000384035 107 ntBASIC1.34□□□□□ -2.19
CDH9Q9ULB4 MIR150-201ENST00000385048 84 ntBASIC1.34□□□□□ -2.19
CDH9Q9ULB4 MIR548B-201ENST00000385247 97 ntBASIC1.34□□□□□ -2.19
CDH9Q9ULB4 Y_RNA.582-201ENST00000391023 95 ntBASIC1.34□□□□□ -2.19
CDH9Q9ULB4 AL117342.1-201ENST00000404861 406 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms