Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.12□□□□□ -2.07
CLIP2Q9UDT6 MTCYBP40-201ENST00000509390 1135 ntBASIC2.12□□□□□ -2.07
CLIP2Q9UDT6 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.12□□□□□ -2.07
CLIP2Q9UDT6 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.12□□□□□ -2.07
CLIP2Q9UDT6 MTND4P7-201ENST00000523876 130 ntBASIC2.12□□□□□ -2.07
CLIP2Q9UDT6 AP000763.2-201ENST00000540641 163 ntBASIC2.12□□□□□ -2.07
CLIP2Q9UDT6 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.12□□□□□ -2.07
CLIP2Q9UDT6 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.12□□□□□ -2.07
CLIP2Q9UDT6 AC134503.1-201ENST00000633048 54 ntBASIC2.12□□□□□ -2.07
CLIP2Q9UDT6 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.12□□□□□ -2.07
CLIP2Q9UDT6 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
CLIP2Q9UDT6 RNU6-655P-201ENST00000362858 107 ntBASIC2.11□□□□□ -2.07
CLIP2Q9UDT6 RNU6-78P-201ENST00000362897 107 ntBASIC2.11□□□□□ -2.07
CLIP2Q9UDT6 Y_RNA.212-201ENST00000364177 102 ntBASIC2.11□□□□□ -2.07
CLIP2Q9UDT6 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CLIP2Q9UDT6 Y_RNA.384-201ENST00000383909 102 ntBASIC2.11□□□□□ -2.07
CLIP2Q9UDT6 MIR559-201ENST00000385188 96 ntBASIC2.11□□□□□ -2.07
CLIP2Q9UDT6 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
CLIP2Q9UDT6 SNORA40.19-201ENST00000390846 128 ntBASIC2.11□□□□□ -2.07
CLIP2Q9UDT6 AL591034.2-201ENST00000402839 359 ntBASIC2.11□□□□□ -2.07
CLIP2Q9UDT6 POLHP1-201ENST00000411806 470 ntBASIC2.11□□□□□ -2.07
CLIP2Q9UDT6 AL669831.1-202ENST00000428504 417 ntBASIC2.11□□□□□ -2.07
CLIP2Q9UDT6 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.11□□□□□ -2.07
CLIP2Q9UDT6 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.11□□□□□ -2.07
CLIP2Q9UDT6 MIR2053-201ENST00000459295 91 ntBASIC2.11□□□□□ -2.07
CLIP2Q9UDT6 AL163540.1-201ENST00000485382 386 ntBASIC2.11□□□□□ -2.07
CLIP2Q9UDT6 Y_RNA.654-201ENST00000497848 106 ntBASIC2.11□□□□□ -2.07
CLIP2Q9UDT6 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.11□□□□□ -2.07
CLIP2Q9UDT6 AC093303.1-201ENST00000514549 295 ntBASIC2.11□□□□□ -2.07
CLIP2Q9UDT6 SNORA4.4-201ENST00000515921 135 ntBASIC2.11□□□□□ -2.07
CLIP2Q9UDT6 RNU6-1045P-201ENST00000516321 107 ntBASIC2.11□□□□□ -2.07
CLIP2Q9UDT6 RNU6-256P-201ENST00000516747 97 ntBASIC2.11□□□□□ -2.07
CLIP2Q9UDT6 RNU6-566P-201ENST00000516790 107 ntBASIC2.11□□□□□ -2.07
CLIP2Q9UDT6 RNU6-586P-201ENST00000517265 104 ntBASIC2.11□□□□□ -2.07
CLIP2Q9UDT6 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.11□□□□□ -2.07
CLIP2Q9UDT6 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.11□□□□□ -2.07
CLIP2Q9UDT6 AC034114.1-201ENST00000520293 285 ntBASIC2.11□□□□□ -2.07
CLIP2Q9UDT6 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.11□□□□□ -2.07
CLIP2Q9UDT6 AL137161.1-201ENST00000532231 390 ntBASIC2.11□□□□□ -2.07
CLIP2Q9UDT6 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.11□□□□□ -2.07
CLIP2Q9UDT6 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.11□□□□□ -2.07
CLIP2Q9UDT6 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.11□□□□□ -2.07
CLIP2Q9UDT6 AL121655.1-201ENST00000605811 308 ntBASIC2.11□□□□□ -2.07
CLIP2Q9UDT6 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.11□□□□□ -2.07
CLIP2Q9UDT6 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CLIP2Q9UDT6 RNU6-1210P-201ENST00000363775 107 ntBASIC2.1□□□□□ -2.07
CLIP2Q9UDT6 RNU6-1188P-201ENST00000363795 107 ntBASIC2.1□□□□□ -2.07
CLIP2Q9UDT6 SNORA16.1-201ENST00000364597 132 ntBASIC2.1□□□□□ -2.07
CLIP2Q9UDT6 SNORA33.2-201ENST00000365413 134 ntBASIC2.1□□□□□ -2.07
CLIP2Q9UDT6 RNU6-1297P-201ENST00000384415 104 ntBASIC2.1□□□□□ -2.07
CLIP2Q9UDT6 Y_RNA.530-201ENST00000384587 101 ntBASIC2.1□□□□□ -2.07
CLIP2Q9UDT6 MTCYBP4-201ENST00000401524 249 ntBASIC2.1□□□□□ -2.07
CLIP2Q9UDT6 CBX3P9-201ENST00000402326 552 ntBASIC2.1□□□□□ -2.07
CLIP2Q9UDT6 Y_RNA.605-201ENST00000410577 105 ntBASIC2.1□□□□□ -2.07
CLIP2Q9UDT6 RNU4-46P-201ENST00000410818 138 ntBASIC2.1□□□□□ -2.07
CLIP2Q9UDT6 RNU7-152P-201ENST00000458982 64 ntBASIC2.1□□□□□ -2.07
CLIP2Q9UDT6 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.1□□□□□ -2.07
CLIP2Q9UDT6 PTP4A1P4-201ENST00000512479 322 ntBASIC2.1□□□□□ -2.07
CLIP2Q9UDT6 RNA5SP454-201ENST00000517231 127 ntBASIC2.1□□□□□ -2.07
CLIP2Q9UDT6 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.1□□□□□ -2.07
CLIP2Q9UDT6 NDUFA5P6-201ENST00000542110 379 ntBASIC2.1□□□□□ -2.07
CLIP2Q9UDT6 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.1□□□□□ -2.07
CLIP2Q9UDT6 MIR4790-201ENST00000577799 79 ntBASIC2.1□□□□□ -2.07
CLIP2Q9UDT6 AL031274.2-201ENST00000599419 203 ntBASIC2.1□□□□□ -2.07
CLIP2Q9UDT6 AC019193.3-201ENST00000609144 554 ntBASIC2.1□□□□□ -2.07
CLIP2Q9UDT6 AL133215.3-201ENST00000609801 448 ntBASIC2.1□□□□□ -2.07
CLIP2Q9UDT6 AC022202.1-201ENST00000613515 211 ntBASIC2.1□□□□□ -2.07
CLIP2Q9UDT6 AL159153.1-201ENST00000619688 317 ntBASIC2.1□□□□□ -2.07
CLIP2Q9UDT6 uc_338.22-201ENST00000622722 187 ntBASIC2.1□□□□□ -2.07
CLIP2Q9UDT6 AC007792.1-201ENST00000623023 402 ntBASIC2.1□□□□□ -2.07
CLIP2Q9UDT6 Z69720.2-201ENST00000624755 279 ntBASIC2.1□□□□□ -2.07
CLIP2Q9UDT6 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CLIP2Q9UDT6 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CLIP2Q9UDT6 ZNF72P-201ENST00000425869 1908 ntBASIC2.09□□□□□ -2.07
CLIP2Q9UDT6 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
CLIP2Q9UDT6 Y_RNA.40-201ENST00000362645 93 ntBASIC2.09□□□□□ -2.07
CLIP2Q9UDT6 RNU1-23P-201ENST00000363361 144 ntBASIC2.09□□□□□ -2.07
CLIP2Q9UDT6 Y_RNA.128-201ENST00000363391 112 ntBASIC2.09□□□□□ -2.07
CLIP2Q9UDT6 RNU6-715P-201ENST00000365204 103 ntBASIC2.09□□□□□ -2.07
CLIP2Q9UDT6 RNU5E-7P-201ENST00000365290 117 ntBASIC2.09□□□□□ -2.07
CLIP2Q9UDT6 Y_RNA.431-201ENST00000384086 102 ntBASIC2.09□□□□□ -2.07
CLIP2Q9UDT6 RNU6-1032P-201ENST00000384100 107 ntBASIC2.09□□□□□ -2.07
CLIP2Q9UDT6 Y_RNA.445-201ENST00000384168 102 ntBASIC2.09□□□□□ -2.07
CLIP2Q9UDT6 RNU6-1160P-201ENST00000384546 104 ntBASIC2.09□□□□□ -2.07
CLIP2Q9UDT6 SNORD70.1-201ENST00000391007 85 ntBASIC2.09□□□□□ -2.07
CLIP2Q9UDT6 AL627390.1-201ENST00000396055 340 ntBASIC2.09□□□□□ -2.07
CLIP2Q9UDT6 HMGN2P39-201ENST00000398005 273 ntBASIC2.09□□□□□ -2.07
CLIP2Q9UDT6 Y_RNA.646-201ENST00000410980 101 ntBASIC2.09□□□□□ -2.07
CLIP2Q9UDT6 RPL31P63-201ENST00000422565 375 ntBASIC2.09□□□□□ -2.07
CLIP2Q9UDT6 AL160004.2-201ENST00000432935 350 ntBASIC2.09□□□□□ -2.07
CLIP2Q9UDT6 AC236972.2-201ENST00000434979 310 ntBASIC2.09□□□□□ -2.07
CLIP2Q9UDT6 AL353689.1-201ENST00000438895 199 ntBASIC2.09□□□□□ -2.07
CLIP2Q9UDT6 MTND1P17-201ENST00000448961 204 ntBASIC2.09□□□□□ -2.07
CLIP2Q9UDT6 Y_RNA.638-201ENST00000459374 113 ntBASIC2.09□□□□□ -2.07
CLIP2Q9UDT6 Y_RNA.631-201ENST00000459607 101 ntBASIC2.09□□□□□ -2.07
CLIP2Q9UDT6 AC021146.2-201ENST00000504736 556 ntBASIC2.09□□□□□ -2.07
CLIP2Q9UDT6 SNORA25.15-201ENST00000516487 89 ntBASIC2.09□□□□□ -2.07
CLIP2Q9UDT6 AC090115.3-201ENST00000553218 849 ntBASIC2.09□□□□□ -2.07
CLIP2Q9UDT6 AL442663.2-201ENST00000554385 511 ntBASIC2.09□□□□□ -2.07
CLIP2Q9UDT6 AC233702.2-202ENST00000562547 291 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 154.7 ms