Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 AC024995.1-201ENST00000523014 93 ntBASIC0.31□□□□□ -2.36
PHRF1Q9P1Y6 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC0.31□□□□□ -2.36
PHRF1Q9P1Y6 AL162424.1-201ENST00000602325 221 ntBASIC0.31□□□□□ -2.36
PHRF1Q9P1Y6 Z83818.1-201ENST00000603584 150 ntBASIC0.31□□□□□ -2.36
PHRF1Q9P1Y6 AC012409.4-201ENST00000612923 249 ntBASIC0.31□□□□□ -2.36
PHRF1Q9P1Y6 AC136475.10-201ENST00000620253 385 ntBASIC0.31□□□□□ -2.36
PHRF1Q9P1Y6 AC131159.1-201ENST00000621854 213 ntBASIC0.31□□□□□ -2.36
PHRF1Q9P1Y6 SNORD56.2-201ENST00000363242 71 ntBASIC0.3□□□□□ -2.36
PHRF1Q9P1Y6 RNU6-61P-201ENST00000365528 109 ntBASIC0.3□□□□□ -2.36
PHRF1Q9P1Y6 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
PHRF1Q9P1Y6 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.3□□□□□ -2.36
PHRF1Q9P1Y6 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.3□□□□□ -2.36
PHRF1Q9P1Y6 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.3□□□□□ -2.36
PHRF1Q9P1Y6 CALM2P2-201ENST00000428512 440 ntBASIC0.3□□□□□ -2.36
PHRF1Q9P1Y6 AL606662.1-201ENST00000445763 553 ntBASIC0.3□□□□□ -2.36
PHRF1Q9P1Y6 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.3□□□□□ -2.36
PHRF1Q9P1Y6 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.3□□□□□ -2.36
PHRF1Q9P1Y6 RNU7-90P-201ENST00000459216 62 ntBASIC0.3□□□□□ -2.36
PHRF1Q9P1Y6 AL049829.1-201ENST00000465411 156 ntBASIC0.3□□□□□ -2.36
PHRF1Q9P1Y6 RNU6-276P-201ENST00000516114 96 ntBASIC0.3□□□□□ -2.36
PHRF1Q9P1Y6 RNU1-142P-201ENST00000516682 145 ntBASIC0.3□□□□□ -2.36
PHRF1Q9P1Y6 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC0.3□□□□□ -2.36
PHRF1Q9P1Y6 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC0.3□□□□□ -2.36
PHRF1Q9P1Y6 AC021231.3-201ENST00000558497 370 ntBASIC0.3□□□□□ -2.36
PHRF1Q9P1Y6 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.3□□□□□ -2.36
PHRF1Q9P1Y6 Z99289.3-201ENST00000605586 594 ntBASIC0.3□□□□□ -2.36
PHRF1Q9P1Y6 AC064807.4-201ENST00000607201 407 ntBASIC0.3□□□□□ -2.36
PHRF1Q9P1Y6 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC0.3□□□□□ -2.36
PHRF1Q9P1Y6 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.3□□□□□ -2.36
PHRF1Q9P1Y6 AC040896.1-201ENST00000613819 479 ntBASIC0.3□□□□□ -2.36
PHRF1Q9P1Y6 AC008250.2-201ENST00000615261 205 ntBASIC0.3□□□□□ -2.36
PHRF1Q9P1Y6 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
PHRF1Q9P1Y6 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
PHRF1Q9P1Y6 RNU6-534P-201ENST00000364877 106 ntBASIC0.29□□□□□ -2.36
PHRF1Q9P1Y6 SNORA32.2-201ENST00000384049 122 ntBASIC0.29□□□□□ -2.36
PHRF1Q9P1Y6 Y_RNA.480-201ENST00000384364 102 ntBASIC0.29□□□□□ -2.36
PHRF1Q9P1Y6 RNU6-331P-201ENST00000384724 107 ntBASIC0.29□□□□□ -2.36
PHRF1Q9P1Y6 MIR942-201ENST00000401111 86 ntBASIC0.29□□□□□ -2.36
PHRF1Q9P1Y6 AL031779.1-201ENST00000415663 330 ntBASIC0.29□□□□□ -2.36
PHRF1Q9P1Y6 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.29□□□□□ -2.36
PHRF1Q9P1Y6 AL356583.2-201ENST00000426536 280 ntBASIC0.29□□□□□ -2.36
PHRF1Q9P1Y6 MTND1P32-201ENST00000433043 938 ntBASIC0.29□□□□□ -2.36
PHRF1Q9P1Y6 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC0.29□□□□□ -2.36
PHRF1Q9P1Y6 ZNF736P4Y-201ENST00000454995 1243 ntBASIC0.29□□□□□ -2.36
PHRF1Q9P1Y6 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.29□□□□□ -2.36
PHRF1Q9P1Y6 PDCD5P2-201ENST00000507570 312 ntBASIC0.29□□□□□ -2.36
PHRF1Q9P1Y6 SNORA31.2-201ENST00000516019 134 ntBASIC0.29□□□□□ -2.36
PHRF1Q9P1Y6 RNU4-54P-201ENST00000516428 129 ntBASIC0.29□□□□□ -2.36
PHRF1Q9P1Y6 RNU2-34P-201ENST00000516534 121 ntBASIC0.29□□□□□ -2.36
PHRF1Q9P1Y6 RNU6-197P-201ENST00000516680 100 ntBASIC0.29□□□□□ -2.36
PHRF1Q9P1Y6 AC013828.2-201ENST00000532487 235 ntBASIC0.29□□□□□ -2.36
PHRF1Q9P1Y6 AC025423.5-201ENST00000550230 219 ntBASIC0.29□□□□□ -2.36
PHRF1Q9P1Y6 ZNF321P-202ENST00000550843 495 ntBASIC0.29□□□□□ -2.36
PHRF1Q9P1Y6 PRELID3BP2-201ENST00000605362 201 ntBASIC0.29□□□□□ -2.36
PHRF1Q9P1Y6 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.29□□□□□ -2.36
PHRF1Q9P1Y6 uc_338.22-201ENST00000622722 187 ntBASIC0.29□□□□□ -2.36
PHRF1Q9P1Y6 BX322639.1-202ENST00000423987 2213 ntBASIC0.28□□□□□ -2.36
PHRF1Q9P1Y6 RNA5SP467-201ENST00000391274 118 ntBASIC0.28□□□□□ -2.36
PHRF1Q9P1Y6 MRPL42P2-201ENST00000403169 426 ntBASIC0.28□□□□□ -2.36
PHRF1Q9P1Y6 RPS3AP37-201ENST00000419176 745 ntBASIC0.28□□□□□ -2.36
PHRF1Q9P1Y6 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.28□□□□□ -2.36
PHRF1Q9P1Y6 MTND1P12-201ENST00000455231 147 ntBASIC0.28□□□□□ -2.36
PHRF1Q9P1Y6 U7.7-201ENST00000459276 60 ntBASIC0.28□□□□□ -2.36
PHRF1Q9P1Y6 AC016632.1-201ENST00000503994 196 ntBASIC0.28□□□□□ -2.36
PHRF1Q9P1Y6 RNU6-567P-201ENST00000516746 107 ntBASIC0.28□□□□□ -2.36
PHRF1Q9P1Y6 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.28□□□□□ -2.36
PHRF1Q9P1Y6 MIR4742-201ENST00000581069 85 ntBASIC0.28□□□□□ -2.36
PHRF1Q9P1Y6 CTHRC1P1-201ENST00000605383 469 ntBASIC0.28□□□□□ -2.36
PHRF1Q9P1Y6 AC104073.3-201ENST00000610942 955 ntBASIC0.28□□□□□ -2.36
PHRF1Q9P1Y6 AL138726.1-201ENST00000614873 333 ntBASIC0.28□□□□□ -2.36
PHRF1Q9P1Y6 AL136221.1-201ENST00000621449 509 ntBASIC0.28□□□□□ -2.36
PHRF1Q9P1Y6 RNA5SP361-201ENST00000362686 118 ntBASIC0.27□□□□□ -2.37
PHRF1Q9P1Y6 RNU6-692P-201ENST00000384496 107 ntBASIC0.27□□□□□ -2.37
PHRF1Q9P1Y6 RNU6-417P-201ENST00000384712 107 ntBASIC0.27□□□□□ -2.37
PHRF1Q9P1Y6 MIR558-201ENST00000384920 94 ntBASIC0.27□□□□□ -2.37
PHRF1Q9P1Y6 AC011233.1-201ENST00000422812 283 ntBASIC0.27□□□□□ -2.37
PHRF1Q9P1Y6 FABP5P4-201ENST00000437203 171 ntBASIC0.27□□□□□ -2.37
PHRF1Q9P1Y6 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.27□□□□□ -2.37
PHRF1Q9P1Y6 AL360271.2-201ENST00000447710 161 ntBASIC0.27□□□□□ -2.37
PHRF1Q9P1Y6 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.27□□□□□ -2.37
PHRF1Q9P1Y6 MTCO2P29-201ENST00000465212 189 ntBASIC0.27□□□□□ -2.37
PHRF1Q9P1Y6 SNORA19.3-201ENST00000516165 130 ntBASIC0.27□□□□□ -2.37
PHRF1Q9P1Y6 RNU6-856P-201ENST00000516959 98 ntBASIC0.27□□□□□ -2.37
PHRF1Q9P1Y6 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC0.27□□□□□ -2.37
PHRF1Q9P1Y6 TPRKBP2-201ENST00000565969 475 ntBASIC0.27□□□□□ -2.37
PHRF1Q9P1Y6 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.27□□□□□ -2.37
PHRF1Q9P1Y6 AL158042.1-201ENST00000605338 460 ntBASIC0.27□□□□□ -2.37
PHRF1Q9P1Y6 AC009994.1-201ENST00000606889 253 ntBASIC0.27□□□□□ -2.37
PHRF1Q9P1Y6 AC068647.2-201ENST00000637380 353 ntBASIC0.27□□□□□ -2.37
PHRF1Q9P1Y6 AC013437.2-201ENST00000639587 677 ntBASIC0.27□□□□□ -2.37
PHRF1Q9P1Y6 CASC19-280ENST00000642102 1351 ntBASIC0.27□□□□□ -2.37
PHRF1Q9P1Y6 RNU4-79P-201ENST00000362764 141 ntBASIC0.27□□□□□ -2.37
PHRF1Q9P1Y6 RNU6-433P-201ENST00000363216 104 ntBASIC0.27□□□□□ -2.37
PHRF1Q9P1Y6 RNU4-48P-201ENST00000365559 182 ntBASIC0.27□□□□□ -2.37
PHRF1Q9P1Y6 RNU6-1026P-201ENST00000384465 108 ntBASIC0.27□□□□□ -2.37
PHRF1Q9P1Y6 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.27□□□□□ -2.37
PHRF1Q9P1Y6 AL590135.1-201ENST00000422215 156 ntBASIC0.27□□□□□ -2.37
PHRF1Q9P1Y6 AC019205.3-201ENST00000424573 156 ntBASIC0.27□□□□□ -2.37
PHRF1Q9P1Y6 RPL22P17-201ENST00000438729 315 ntBASIC0.27□□□□□ -2.37
PHRF1Q9P1Y6 AC016700.2-201ENST00000446011 156 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 141 ms