Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 MIR1253-201ENST00000408273 105 ntBASIC0.81□□□□□ -2.28
VAPAQ9P0L0 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.81□□□□□ -2.28
VAPAQ9P0L0 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC0.81□□□□□ -2.28
VAPAQ9P0L0 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.81□□□□□ -2.28
VAPAQ9P0L0 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.81□□□□□ -2.28
VAPAQ9P0L0 COX6CP14-201ENST00000469580 174 ntBASIC0.81□□□□□ -2.28
VAPAQ9P0L0 SCARNA16.2-201ENST00000516520 172 ntBASIC0.81□□□□□ -2.28
VAPAQ9P0L0 AC106038.2-201ENST00000520706 568 ntBASIC0.81□□□□□ -2.28
VAPAQ9P0L0 RNU6-323P-201ENST00000521915 107 ntBASIC0.81□□□□□ -2.28
VAPAQ9P0L0 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.81□□□□□ -2.28
VAPAQ9P0L0 AC090616.2-202ENST00000584248 222 ntBASIC0.81□□□□□ -2.28
VAPAQ9P0L0 FAM71BP1-201ENST00000604431 523 ntBASIC0.81□□□□□ -2.28
VAPAQ9P0L0 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.81□□□□□ -2.28
VAPAQ9P0L0 AL020996.3-201ENST00000606617 222 ntBASIC0.81□□□□□ -2.28
VAPAQ9P0L0 AL359697.1-201ENST00000624879 587 ntBASIC0.81□□□□□ -2.28
VAPAQ9P0L0 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.81□□□□□ -2.28
VAPAQ9P0L0 SNORD114-2-201ENST00000363953 78 ntBASIC0.8□□□□□ -2.28
VAPAQ9P0L0 RNU6-282P-201ENST00000365357 103 ntBASIC0.8□□□□□ -2.28
VAPAQ9P0L0 MIR532-201ENST00000385025 91 ntBASIC0.8□□□□□ -2.28
VAPAQ9P0L0 RNU6-1106P-201ENST00000390845 107 ntBASIC0.8□□□□□ -2.28
VAPAQ9P0L0 NFU1P2-201ENST00000448700 469 ntBASIC0.8□□□□□ -2.28
VAPAQ9P0L0 AC022364.2-201ENST00000457963 554 ntBASIC0.8□□□□□ -2.28
VAPAQ9P0L0 RNU7-167P-201ENST00000459160 62 ntBASIC0.8□□□□□ -2.28
VAPAQ9P0L0 RPL39P38-201ENST00000467018 153 ntBASIC0.8□□□□□ -2.28
VAPAQ9P0L0 GMFBP1-201ENST00000467831 427 ntBASIC0.8□□□□□ -2.28
VAPAQ9P0L0 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.8□□□□□ -2.28
VAPAQ9P0L0 AC105417.1-201ENST00000514691 285 ntBASIC0.8□□□□□ -2.28
VAPAQ9P0L0 ACA64.5-201ENST00000516207 127 ntBASIC0.8□□□□□ -2.28
VAPAQ9P0L0 RNU6-1069P-201ENST00000516612 133 ntBASIC0.8□□□□□ -2.28
VAPAQ9P0L0 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.8□□□□□ -2.28
VAPAQ9P0L0 MTND2P32-201ENST00000521584 1038 ntBASIC0.8□□□□□ -2.28
VAPAQ9P0L0 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.8□□□□□ -2.28
VAPAQ9P0L0 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.8□□□□□ -2.28
VAPAQ9P0L0 CBX3P8-201ENST00000532412 525 ntBASIC0.8□□□□□ -2.28
VAPAQ9P0L0 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.8□□□□□ -2.28
VAPAQ9P0L0 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC0.8□□□□□ -2.28
VAPAQ9P0L0 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC0.8□□□□□ -2.28
VAPAQ9P0L0 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.8□□□□□ -2.28
VAPAQ9P0L0 AC245014.2-201ENST00000603689 287 ntBASIC0.8□□□□□ -2.28
VAPAQ9P0L0 AC011458.1-201ENST00000604034 617 ntBASIC0.8□□□□□ -2.28
VAPAQ9P0L0 AC246785.4-201ENST00000605374 287 ntBASIC0.8□□□□□ -2.28
VAPAQ9P0L0 AL021879.1-201ENST00000611756 288 ntBASIC0.8□□□□□ -2.28
VAPAQ9P0L0 TCL6_2.1-201ENST00000615162 119 ntBASIC0.8□□□□□ -2.28
VAPAQ9P0L0 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
VAPAQ9P0L0 Y_RNA.287-201ENST00000364853 94 ntBASIC0.79□□□□□ -2.28
VAPAQ9P0L0 Y_RNA.399-201ENST00000383955 105 ntBASIC0.79□□□□□ -2.28
VAPAQ9P0L0 RNU6-950P-201ENST00000384651 107 ntBASIC0.79□□□□□ -2.28
VAPAQ9P0L0 SNORD73A-201ENST00000386062 65 ntBASIC0.79□□□□□ -2.28
VAPAQ9P0L0 RNU2-9P-201ENST00000410194 145 ntBASIC0.79□□□□□ -2.28
VAPAQ9P0L0 BX295541.1-201ENST00000417774 250 ntBASIC0.79□□□□□ -2.28
VAPAQ9P0L0 MTCO2P34-201ENST00000421994 607 ntBASIC0.79□□□□□ -2.28
VAPAQ9P0L0 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.79□□□□□ -2.28
VAPAQ9P0L0 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC0.79□□□□□ -2.28
VAPAQ9P0L0 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.79□□□□□ -2.28
VAPAQ9P0L0 MTCO2P3-201ENST00000442543 421 ntBASIC0.79□□□□□ -2.28
VAPAQ9P0L0 AC103851.1-201ENST00000506833 274 ntBASIC0.79□□□□□ -2.28
VAPAQ9P0L0 RNU6-351P-201ENST00000516097 100 ntBASIC0.79□□□□□ -2.28
VAPAQ9P0L0 AC026470.2-201ENST00000561492 181 ntBASIC0.79□□□□□ -2.28
VAPAQ9P0L0 MIR3941-201ENST00000582572 103 ntBASIC0.79□□□□□ -2.28
VAPAQ9P0L0 MIR4661-201ENST00000582720 75 ntBASIC0.79□□□□□ -2.28
VAPAQ9P0L0 AP000942.3-201ENST00000603702 160 ntBASIC0.79□□□□□ -2.28
VAPAQ9P0L0 AC097065.2-201ENST00000608159 533 ntBASIC0.79□□□□□ -2.28
VAPAQ9P0L0 U2.17-201ENST00000611454 95 ntBASIC0.79□□□□□ -2.28
VAPAQ9P0L0 MIR6715A-201ENST00000615929 79 ntBASIC0.79□□□□□ -2.28
VAPAQ9P0L0 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
VAPAQ9P0L0 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC0.78□□□□□ -2.28
VAPAQ9P0L0 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
VAPAQ9P0L0 RNU6-1305P-201ENST00000364353 104 ntBASIC0.78□□□□□ -2.28
VAPAQ9P0L0 RNU6-1031P-201ENST00000384773 107 ntBASIC0.78□□□□□ -2.28
VAPAQ9P0L0 MIR146A-201ENST00000385201 99 ntBASIC0.78□□□□□ -2.28
VAPAQ9P0L0 RNU6-910P-201ENST00000390844 107 ntBASIC0.78□□□□□ -2.28
VAPAQ9P0L0 RNU2-29P-201ENST00000410423 189 ntBASIC0.78□□□□□ -2.28
VAPAQ9P0L0 RNU6-57P-201ENST00000411348 103 ntBASIC0.78□□□□□ -2.28
VAPAQ9P0L0 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.78□□□□□ -2.28
VAPAQ9P0L0 POLR2J4-204ENST00000418424 324 ntBASIC0.78□□□□□ -2.28
VAPAQ9P0L0 TIMM9P3-201ENST00000428659 274 ntBASIC0.78□□□□□ -2.28
VAPAQ9P0L0 AL606517.2-201ENST00000442855 241 ntBASIC0.78□□□□□ -2.28
VAPAQ9P0L0 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.78□□□□□ -2.28
VAPAQ9P0L0 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.78□□□□□ -2.28
VAPAQ9P0L0 OFD1P4Y-201ENST00000455273 1179 ntBASIC0.78□□□□□ -2.28
VAPAQ9P0L0 RNU7-125P-201ENST00000458760 62 ntBASIC0.78□□□□□ -2.28
VAPAQ9P0L0 SNORA31.2-201ENST00000516019 134 ntBASIC0.78□□□□□ -2.28
VAPAQ9P0L0 SNORA18.6-201ENST00000516792 115 ntBASIC0.78□□□□□ -2.28
VAPAQ9P0L0 RNU6-612P-201ENST00000516909 102 ntBASIC0.78□□□□□ -2.28
VAPAQ9P0L0 AC024995.1-201ENST00000523014 93 ntBASIC0.78□□□□□ -2.28
VAPAQ9P0L0 MIR4698-201ENST00000577795 80 ntBASIC0.78□□□□□ -2.28
VAPAQ9P0L0 AP000907.4-201ENST00000604143 237 ntBASIC0.78□□□□□ -2.28
VAPAQ9P0L0 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.77□□□□□ -2.29
VAPAQ9P0L0 AL031577.2-201ENST00000404133 280 ntBASIC0.77□□□□□ -2.29
VAPAQ9P0L0 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.77□□□□□ -2.29
VAPAQ9P0L0 RNA5SP494-201ENST00000410653 129 ntBASIC0.77□□□□□ -2.29
VAPAQ9P0L0 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.77□□□□□ -2.29
VAPAQ9P0L0 MTCO3P8-201ENST00000453691 755 ntBASIC0.77□□□□□ -2.29
VAPAQ9P0L0 SNRPFP3-201ENST00000457792 225 ntBASIC0.77□□□□□ -2.29
VAPAQ9P0L0 AC092991.1-201ENST00000477176 376 ntBASIC0.77□□□□□ -2.29
VAPAQ9P0L0 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.77□□□□□ -2.29
VAPAQ9P0L0 RNU6-1129P-201ENST00000515964 104 ntBASIC0.77□□□□□ -2.29
VAPAQ9P0L0 SNORA31.10-201ENST00000516482 106 ntBASIC0.77□□□□□ -2.29
VAPAQ9P0L0 AP002963.1-201ENST00000530590 184 ntBASIC0.77□□□□□ -2.29
VAPAQ9P0L0 AC016256.1-201ENST00000547971 354 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 172.6 ms