Protein–RNA interactions for Protein: Q9NZ94

NLGN3, Neuroligin-3, humanhuman

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN3Q9NZ94 RNA5SP338-201ENST00000410495 85 ntBASIC1.99□□□□□ -2.09
NLGN3Q9NZ94 EDDM3CP-201ENST00000415977 425 ntBASIC1.99□□□□□ -2.09
NLGN3Q9NZ94 EIF1AXP1-201ENST00000419267 435 ntBASIC1.99□□□□□ -2.09
NLGN3Q9NZ94 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.99□□□□□ -2.09
NLGN3Q9NZ94 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.99□□□□□ -2.09
NLGN3Q9NZ94 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.99□□□□□ -2.09
NLGN3Q9NZ94 ACA59.1-201ENST00000515966 143 ntBASIC1.99□□□□□ -2.09
NLGN3Q9NZ94 RNA5SP182-201ENST00000516064 82 ntBASIC1.99□□□□□ -2.09
NLGN3Q9NZ94 RNU6-1213P-201ENST00000517075 94 ntBASIC1.99□□□□□ -2.09
NLGN3Q9NZ94 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.99□□□□□ -2.09
NLGN3Q9NZ94 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.99□□□□□ -2.09
NLGN3Q9NZ94 AC021231.3-201ENST00000558497 370 ntBASIC1.99□□□□□ -2.09
NLGN3Q9NZ94 AC109446.1-201ENST00000566172 220 ntBASIC1.99□□□□□ -2.09
NLGN3Q9NZ94 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.99□□□□□ -2.09
NLGN3Q9NZ94 FGF7P1-201ENST00000582820 288 ntBASIC1.99□□□□□ -2.09
NLGN3Q9NZ94 AC243960.4-201ENST00000600532 288 ntBASIC1.99□□□□□ -2.09
NLGN3Q9NZ94 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.99□□□□□ -2.09
NLGN3Q9NZ94 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.99□□□□□ -2.09
NLGN3Q9NZ94 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
NLGN3Q9NZ94 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
NLGN3Q9NZ94 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.98□□□□□ -2.09
NLGN3Q9NZ94 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
NLGN3Q9NZ94 Y_RNA.404-201ENST00000383978 102 ntBASIC1.98□□□□□ -2.09
NLGN3Q9NZ94 RNU6-968P-201ENST00000384076 107 ntBASIC1.98□□□□□ -2.09
NLGN3Q9NZ94 Y_RNA.529-201ENST00000384586 119 ntBASIC1.98□□□□□ -2.09
NLGN3Q9NZ94 Y_RNA.533-201ENST00000384596 114 ntBASIC1.98□□□□□ -2.09
NLGN3Q9NZ94 MTCYBP2-201ENST00000407745 171 ntBASIC1.98□□□□□ -2.09
NLGN3Q9NZ94 RNU6-1050P-201ENST00000410388 107 ntBASIC1.98□□□□□ -2.09
NLGN3Q9NZ94 Y_RNA.597-201ENST00000410463 100 ntBASIC1.98□□□□□ -2.09
NLGN3Q9NZ94 RNU2-48P-201ENST00000410694 191 ntBASIC1.98□□□□□ -2.09
NLGN3Q9NZ94 AL358453.1-201ENST00000422522 250 ntBASIC1.98□□□□□ -2.09
NLGN3Q9NZ94 AC025033.1-201ENST00000463883 194 ntBASIC1.98□□□□□ -2.09
NLGN3Q9NZ94 RPL7P42-201ENST00000481005 679 ntBASIC1.98□□□□□ -2.09
NLGN3Q9NZ94 RNA5SP458-201ENST00000516188 119 ntBASIC1.98□□□□□ -2.09
NLGN3Q9NZ94 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.98□□□□□ -2.09
NLGN3Q9NZ94 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.98□□□□□ -2.09
NLGN3Q9NZ94 AC016256.1-201ENST00000547971 354 ntBASIC1.98□□□□□ -2.09
NLGN3Q9NZ94 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.98□□□□□ -2.09
NLGN3Q9NZ94 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.98□□□□□ -2.09
NLGN3Q9NZ94 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.98□□□□□ -2.09
NLGN3Q9NZ94 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.98□□□□□ -2.09
NLGN3Q9NZ94 AL670379.2-201ENST00000604983 252 ntBASIC1.98□□□□□ -2.09
NLGN3Q9NZ94 AP000654.2-201ENST00000605633 586 ntBASIC1.98□□□□□ -2.09
NLGN3Q9NZ94 AC009229.3-201ENST00000608056 282 ntBASIC1.98□□□□□ -2.09
NLGN3Q9NZ94 MIR6845-201ENST00000613182 61 ntBASIC1.98□□□□□ -2.09
NLGN3Q9NZ94 Y_RNA.783-201ENST00000613546 102 ntBASIC1.98□□□□□ -2.09
NLGN3Q9NZ94 AC098657.3-201ENST00000620434 263 ntBASIC1.98□□□□□ -2.09
NLGN3Q9NZ94 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
NLGN3Q9NZ94 KPNA2P1-201ENST00000458289 1591 ntBASIC1.98□□□□□ -2.09
NLGN3Q9NZ94 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
NLGN3Q9NZ94 Y_RNA.48-201ENST00000362710 103 ntBASIC1.97□□□□□ -2.09
NLGN3Q9NZ94 SNORD32B-201ENST00000364460 84 ntBASIC1.97□□□□□ -2.09
NLGN3Q9NZ94 Y_RNA.263-201ENST00000364659 114 ntBASIC1.97□□□□□ -2.09
NLGN3Q9NZ94 RNU6-593P-201ENST00000364716 112 ntBASIC1.97□□□□□ -2.09
NLGN3Q9NZ94 RNU6-378P-201ENST00000384324 107 ntBASIC1.97□□□□□ -2.09
NLGN3Q9NZ94 Y_RNA.482-201ENST00000384377 111 ntBASIC1.97□□□□□ -2.09
NLGN3Q9NZ94 MIR487A-201ENST00000385009 80 ntBASIC1.97□□□□□ -2.09
NLGN3Q9NZ94 MIR17-201ENST00000385012 84 ntBASIC1.97□□□□□ -2.09
NLGN3Q9NZ94 MIR29B2-201ENST00000385055 81 ntBASIC1.97□□□□□ -2.09
NLGN3Q9NZ94 RNU6-1009P-201ENST00000390996 107 ntBASIC1.97□□□□□ -2.09
NLGN3Q9NZ94 RNU6-1304P-201ENST00000411374 106 ntBASIC1.97□□□□□ -2.09
NLGN3Q9NZ94 AL139156.1-201ENST00000412785 841 ntBASIC1.97□□□□□ -2.09
NLGN3Q9NZ94 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.97□□□□□ -2.09
NLGN3Q9NZ94 EIF4EP2-201ENST00000422816 654 ntBASIC1.97□□□□□ -2.09
NLGN3Q9NZ94 AC012306.1-201ENST00000423267 114 ntBASIC1.97□□□□□ -2.09
NLGN3Q9NZ94 Z82188.1-201ENST00000436709 154 ntBASIC1.97□□□□□ -2.09
NLGN3Q9NZ94 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
NLGN3Q9NZ94 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.97□□□□□ -2.09
NLGN3Q9NZ94 SNORA4.4-201ENST00000515921 135 ntBASIC1.97□□□□□ -2.09
NLGN3Q9NZ94 RNA5SP384-201ENST00000516615 116 ntBASIC1.97□□□□□ -2.09
NLGN3Q9NZ94 MIR5696-201ENST00000578474 85 ntBASIC1.97□□□□□ -2.09
NLGN3Q9NZ94 AC010928.2-201ENST00000588017 287 ntBASIC1.97□□□□□ -2.09
NLGN3Q9NZ94 AC007229.1-201ENST00000590455 412 ntBASIC1.97□□□□□ -2.09
NLGN3Q9NZ94 AC078899.2-201ENST00000595282 212 ntBASIC1.97□□□□□ -2.09
NLGN3Q9NZ94 PCGEM1.1-201ENST00000613431 131 ntBASIC1.97□□□□□ -2.09
NLGN3Q9NZ94 Y_RNA.804-201ENST00000615262 101 ntBASIC1.97□□□□□ -2.09
NLGN3Q9NZ94 AC099654.5-201ENST00000636479 350 ntBASIC1.97□□□□□ -2.09
NLGN3Q9NZ94 AC112487.2-201ENST00000637950 304 ntBASIC1.97□□□□□ -2.09
NLGN3Q9NZ94 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.97□□□□□ -2.09
NLGN3Q9NZ94 AL359851.1-201ENST00000569460 4997 ntBASIC1.96□□□□□ -2.1
NLGN3Q9NZ94 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.96□□□□□ -2.1
NLGN3Q9NZ94 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
NLGN3Q9NZ94 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
NLGN3Q9NZ94 AC233981.2-201ENST00000611524 1614 ntBASIC1.96□□□□□ -2.1
NLGN3Q9NZ94 MTND5P9-201ENST00000503854 1755 ntBASIC1.96□□□□□ -2.1
NLGN3Q9NZ94 RNU6-370P-201ENST00000411008 104 ntBASIC1.96□□□□□ -2.1
NLGN3Q9NZ94 AC243428.1-201ENST00000421099 264 ntBASIC1.96□□□□□ -2.1
NLGN3Q9NZ94 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.96□□□□□ -2.1
NLGN3Q9NZ94 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.96□□□□□ -2.1
NLGN3Q9NZ94 Y_RNA.635-201ENST00000459041 101 ntBASIC1.96□□□□□ -2.1
NLGN3Q9NZ94 RNU6-717P-201ENST00000459076 104 ntBASIC1.96□□□□□ -2.1
NLGN3Q9NZ94 AC107032.1-201ENST00000485945 480 ntBASIC1.96□□□□□ -2.1
NLGN3Q9NZ94 RPL23AP75-201ENST00000491601 451 ntBASIC1.96□□□□□ -2.1
NLGN3Q9NZ94 FGF7P4-201ENST00000509595 295 ntBASIC1.96□□□□□ -2.1
NLGN3Q9NZ94 SNORA31.25-201ENST00000517242 134 ntBASIC1.96□□□□□ -2.1
NLGN3Q9NZ94 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.96□□□□□ -2.1
NLGN3Q9NZ94 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.96□□□□□ -2.1
NLGN3Q9NZ94 CBX3P8-201ENST00000532412 525 ntBASIC1.96□□□□□ -2.1
NLGN3Q9NZ94 APOOP3-201ENST00000536787 586 ntBASIC1.96□□□□□ -2.1
NLGN3Q9NZ94 AC018630.3-201ENST00000542637 96 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms