Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.05□□□□□ -2.24
CLN6Q9NWW5 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.05□□□□□ -2.24
CLN6Q9NWW5 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.05□□□□□ -2.24
CLN6Q9NWW5 CYP3A52P-201ENST00000563326 91 ntBASIC1.05□□□□□ -2.24
CLN6Q9NWW5 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.05□□□□□ -2.24
CLN6Q9NWW5 MIR3945-201ENST00000581853 98 ntBASIC1.05□□□□□ -2.24
CLN6Q9NWW5 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.05□□□□□ -2.24
CLN6Q9NWW5 AC073413.2-201ENST00000604332 360 ntBASIC1.05□□□□□ -2.24
CLN6Q9NWW5 AL354950.2-201ENST00000617939 290 ntBASIC1.05□□□□□ -2.24
CLN6Q9NWW5 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.05□□□□□ -2.24
CLN6Q9NWW5 snoU2-30.2-201ENST00000362805 70 ntBASIC1.04□□□□□ -2.24
CLN6Q9NWW5 SNORA4.2-201ENST00000365313 147 ntBASIC1.04□□□□□ -2.24
CLN6Q9NWW5 RNU5A-6P-201ENST00000384136 116 ntBASIC1.04□□□□□ -2.24
CLN6Q9NWW5 MIR515-2-201ENST00000384883 83 ntBASIC1.04□□□□□ -2.24
CLN6Q9NWW5 MIR515-1-201ENST00000384884 83 ntBASIC1.04□□□□□ -2.24
CLN6Q9NWW5 MIR513A1-201ENST00000385138 129 ntBASIC1.04□□□□□ -2.24
CLN6Q9NWW5 AC004965.1-201ENST00000413033 213 ntBASIC1.04□□□□□ -2.24
CLN6Q9NWW5 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.04□□□□□ -2.24
CLN6Q9NWW5 AC073464.1-201ENST00000429823 534 ntBASIC1.04□□□□□ -2.24
CLN6Q9NWW5 AC074290.1-201ENST00000448883 135 ntBASIC1.04□□□□□ -2.24
CLN6Q9NWW5 MTCO2P18-201ENST00000457151 658 ntBASIC1.04□□□□□ -2.24
CLN6Q9NWW5 RNU6-1146P-201ENST00000516282 102 ntBASIC1.04□□□□□ -2.24
CLN6Q9NWW5 LRRC34P1-201ENST00000542742 915 ntBASIC1.04□□□□□ -2.24
CLN6Q9NWW5 MIR4421-201ENST00000578133 69 ntBASIC1.04□□□□□ -2.24
CLN6Q9NWW5 AC023043.2-201ENST00000589678 1026 ntBASIC1.04□□□□□ -2.24
CLN6Q9NWW5 AC040896.1-201ENST00000613819 479 ntBASIC1.04□□□□□ -2.24
CLN6Q9NWW5 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.04□□□□□ -2.24
CLN6Q9NWW5 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
CLN6Q9NWW5 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.04□□□□□ -2.24
CLN6Q9NWW5 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
CLN6Q9NWW5 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
CLN6Q9NWW5 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
CLN6Q9NWW5 RPS26P42-201ENST00000413485 326 ntBASIC1.03□□□□□ -2.24
CLN6Q9NWW5 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.03□□□□□ -2.24
CLN6Q9NWW5 HMGN2P34-201ENST00000437647 269 ntBASIC1.03□□□□□ -2.24
CLN6Q9NWW5 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.03□□□□□ -2.24
CLN6Q9NWW5 NFU1P2-201ENST00000448700 469 ntBASIC1.03□□□□□ -2.24
CLN6Q9NWW5 RPS29P27-201ENST00000463711 170 ntBASIC1.03□□□□□ -2.24
CLN6Q9NWW5 OR2A41P-201ENST00000473586 105 ntBASIC1.03□□□□□ -2.24
CLN6Q9NWW5 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.03□□□□□ -2.24
CLN6Q9NWW5 RNU6-189P-201ENST00000516120 101 ntBASIC1.03□□□□□ -2.24
CLN6Q9NWW5 RNU7-40P-201ENST00000516397 64 ntBASIC1.03□□□□□ -2.24
CLN6Q9NWW5 AC087854.1-201ENST00000519706 414 ntBASIC1.03□□□□□ -2.24
CLN6Q9NWW5 AC104576.1-201ENST00000524225 88 ntBASIC1.03□□□□□ -2.24
CLN6Q9NWW5 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.03□□□□□ -2.24
CLN6Q9NWW5 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.03□□□□□ -2.24
CLN6Q9NWW5 DNAJC19P9-201ENST00000555084 351 ntBASIC1.03□□□□□ -2.24
CLN6Q9NWW5 Z99497.2-201ENST00000603634 310 ntBASIC1.03□□□□□ -2.24
CLN6Q9NWW5 AP000907.4-201ENST00000604143 237 ntBASIC1.03□□□□□ -2.24
CLN6Q9NWW5 AL365434.2-201ENST00000607979 234 ntBASIC1.03□□□□□ -2.24
CLN6Q9NWW5 MIR8065-201ENST00000620577 100 ntBASIC1.03□□□□□ -2.24
CLN6Q9NWW5 AC023510.2-201ENST00000622162 746 ntBASIC1.03□□□□□ -2.24
CLN6Q9NWW5 AC006001.4-201ENST00000622243 395 ntBASIC1.03□□□□□ -2.24
CLN6Q9NWW5 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
CLN6Q9NWW5 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
CLN6Q9NWW5 RNA5SP327-201ENST00000362494 101 ntBASIC1.02□□□□□ -2.25
CLN6Q9NWW5 RNU5B-2P-201ENST00000363036 113 ntBASIC1.02□□□□□ -2.25
CLN6Q9NWW5 SNORA33-201ENST00000363664 130 ntBASIC1.02□□□□□ -2.25
CLN6Q9NWW5 RNA5SP259-201ENST00000365541 109 ntBASIC1.02□□□□□ -2.25
CLN6Q9NWW5 RNU6-1286P-201ENST00000383871 107 ntBASIC1.02□□□□□ -2.25
CLN6Q9NWW5 RNU6-968P-201ENST00000384076 107 ntBASIC1.02□□□□□ -2.25
CLN6Q9NWW5 RNU6-975P-201ENST00000384296 105 ntBASIC1.02□□□□□ -2.25
CLN6Q9NWW5 MIR549A-201ENST00000385268 96 ntBASIC1.02□□□□□ -2.25
CLN6Q9NWW5 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
CLN6Q9NWW5 SNORD37.1-201ENST00000390968 65 ntBASIC1.02□□□□□ -2.25
CLN6Q9NWW5 MTND2P9-201ENST00000422293 931 ntBASIC1.02□□□□□ -2.25
CLN6Q9NWW5 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.02□□□□□ -2.25
CLN6Q9NWW5 AC009237.7-201ENST00000447357 229 ntBASIC1.02□□□□□ -2.25
CLN6Q9NWW5 AL133373.1-201ENST00000497098 94 ntBASIC1.02□□□□□ -2.25
CLN6Q9NWW5 HMGN1P12-201ENST00000499125 195 ntBASIC1.02□□□□□ -2.25
CLN6Q9NWW5 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.02□□□□□ -2.25
CLN6Q9NWW5 AL512310.8-201ENST00000550183 120 ntBASIC1.02□□□□□ -2.25
CLN6Q9NWW5 AC025423.5-201ENST00000550230 219 ntBASIC1.02□□□□□ -2.25
CLN6Q9NWW5 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.02□□□□□ -2.25
CLN6Q9NWW5 AC145350.1-201ENST00000567426 208 ntBASIC1.02□□□□□ -2.25
CLN6Q9NWW5 MIR4528-201ENST00000577763 90 ntBASIC1.02□□□□□ -2.25
CLN6Q9NWW5 AC064836.2-201ENST00000609491 462 ntBASIC1.02□□□□□ -2.25
CLN6Q9NWW5 AL512598.1-201ENST00000610158 273 ntBASIC1.02□□□□□ -2.25
CLN6Q9NWW5 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.02□□□□□ -2.25
CLN6Q9NWW5 AC009033.1-201ENST00000624279 431 ntBASIC1.02□□□□□ -2.25
CLN6Q9NWW5 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.02□□□□□ -2.25
CLN6Q9NWW5 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
CLN6Q9NWW5 RNU1-17P-201ENST00000363022 152 ntBASIC1.01□□□□□ -2.25
CLN6Q9NWW5 Y_RNA.123-201ENST00000363338 102 ntBASIC1.01□□□□□ -2.25
CLN6Q9NWW5 RNU6-457P-201ENST00000363999 107 ntBASIC1.01□□□□□ -2.25
CLN6Q9NWW5 RNU6-1305P-201ENST00000364353 104 ntBASIC1.01□□□□□ -2.25
CLN6Q9NWW5 RNU6-1317P-201ENST00000364582 104 ntBASIC1.01□□□□□ -2.25
CLN6Q9NWW5 RNU6-534P-201ENST00000364877 106 ntBASIC1.01□□□□□ -2.25
CLN6Q9NWW5 U8.10-201ENST00000384260 133 ntBASIC1.01□□□□□ -2.25
CLN6Q9NWW5 RNU6-348P-201ENST00000384386 107 ntBASIC1.01□□□□□ -2.25
CLN6Q9NWW5 MIR1253-201ENST00000408273 105 ntBASIC1.01□□□□□ -2.25
CLN6Q9NWW5 RPL37P10-201ENST00000412884 288 ntBASIC1.01□□□□□ -2.25
CLN6Q9NWW5 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC1.01□□□□□ -2.25
CLN6Q9NWW5 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC1.01□□□□□ -2.25
CLN6Q9NWW5 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC1.01□□□□□ -2.25
CLN6Q9NWW5 MTCO3P8-201ENST00000453691 755 ntBASIC1.01□□□□□ -2.25
CLN6Q9NWW5 TPTE2P5-203ENST00000458118 728 ntBASIC1.01□□□□□ -2.25
CLN6Q9NWW5 RN7SKP210-201ENST00000459176 261 ntBASIC1.01□□□□□ -2.25
CLN6Q9NWW5 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.01□□□□□ -2.25
CLN6Q9NWW5 AL442163.3-201ENST00000554110 156 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms