Protein–RNA interactions for Protein: Q9NQT5

EXOSC3, Exosome complex component RRP40, humanhuman

Known RBP Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3Q9NQT5 MIR3618-201ENST00000580330 88 ntBASIC1.64□□□□□ -2.15
EXOSC3Q9NQT5 AC010928.2-201ENST00000588017 287 ntBASIC1.64□□□□□ -2.15
EXOSC3Q9NQT5 AC018638.8-201ENST00000588755 281 ntBASIC1.64□□□□□ -2.15
EXOSC3Q9NQT5 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.64□□□□□ -2.15
EXOSC3Q9NQT5 AC124303.1-201ENST00000605703 360 ntBASIC1.64□□□□□ -2.15
EXOSC3Q9NQT5 AL022345.1-201ENST00000607292 135 ntBASIC1.64□□□□□ -2.15
EXOSC3Q9NQT5 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.64□□□□□ -2.15
EXOSC3Q9NQT5 AC130454.1-201ENST00000622948 401 ntBASIC1.64□□□□□ -2.15
EXOSC3Q9NQT5 AC091932.3-201ENST00000624223 323 ntBASIC1.64□□□□□ -2.15
EXOSC3Q9NQT5 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.64□□□□□ -2.15
EXOSC3Q9NQT5 RNU1-76P-201ENST00000362903 159 ntBASIC1.63□□□□□ -2.15
EXOSC3Q9NQT5 RNU6-23P-201ENST00000363283 107 ntBASIC1.63□□□□□ -2.15
EXOSC3Q9NQT5 Y_RNA.332-201ENST00000365271 113 ntBASIC1.63□□□□□ -2.15
EXOSC3Q9NQT5 MIR9-3-201ENST00000385084 90 ntBASIC1.63□□□□□ -2.15
EXOSC3Q9NQT5 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.63□□□□□ -2.15
EXOSC3Q9NQT5 Z82188.1-201ENST00000436709 154 ntBASIC1.63□□□□□ -2.15
EXOSC3Q9NQT5 DAP3P1-201ENST00000441522 278 ntBASIC1.63□□□□□ -2.15
EXOSC3Q9NQT5 AL513124.1-201ENST00000450410 614 ntBASIC1.63□□□□□ -2.15
EXOSC3Q9NQT5 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.63□□□□□ -2.15
EXOSC3Q9NQT5 FO393415.2-201ENST00000480085 343 ntBASIC1.63□□□□□ -2.15
EXOSC3Q9NQT5 RPS23P5-201ENST00000495419 428 ntBASIC1.63□□□□□ -2.15
EXOSC3Q9NQT5 ACA59.1-201ENST00000515966 143 ntBASIC1.63□□□□□ -2.15
EXOSC3Q9NQT5 RNU6-566P-201ENST00000516790 107 ntBASIC1.63□□□□□ -2.15
EXOSC3Q9NQT5 AF235103.2-201ENST00000525753 346 ntBASIC1.63□□□□□ -2.15
EXOSC3Q9NQT5 AP000889.1-201ENST00000530968 660 ntBASIC1.63□□□□□ -2.15
EXOSC3Q9NQT5 MIR4419B-201ENST00000577260 68 ntBASIC1.63□□□□□ -2.15
EXOSC3Q9NQT5 AC024614.2-201ENST00000577584 372 ntBASIC1.63□□□□□ -2.15
EXOSC3Q9NQT5 AC078899.2-201ENST00000595282 212 ntBASIC1.63□□□□□ -2.15
EXOSC3Q9NQT5 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.63□□□□□ -2.15
EXOSC3Q9NQT5 AC009318.2-201ENST00000610917 651 ntBASIC1.63□□□□□ -2.15
EXOSC3Q9NQT5 AC009248.2-201ENST00000619826 254 ntBASIC1.63□□□□□ -2.15
EXOSC3Q9NQT5 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.63□□□□□ -2.15
EXOSC3Q9NQT5 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.63□□□□□ -2.15
EXOSC3Q9NQT5 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.63□□□□□ -2.15
EXOSC3Q9NQT5 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
EXOSC3Q9NQT5 MIR340-201ENST00000362125 95 ntBASIC1.62□□□□□ -2.15
EXOSC3Q9NQT5 RNU6-1059P-201ENST00000363752 98 ntBASIC1.62□□□□□ -2.15
EXOSC3Q9NQT5 RNA5SP493-201ENST00000364115 91 ntBASIC1.62□□□□□ -2.15
EXOSC3Q9NQT5 Y_RNA.301-201ENST00000364990 103 ntBASIC1.62□□□□□ -2.15
EXOSC3Q9NQT5 RNU6-1013P-201ENST00000384180 107 ntBASIC1.62□□□□□ -2.15
EXOSC3Q9NQT5 RNU6-1026P-201ENST00000384465 108 ntBASIC1.62□□□□□ -2.15
EXOSC3Q9NQT5 RNU6-160P-201ENST00000384591 107 ntBASIC1.62□□□□□ -2.15
EXOSC3Q9NQT5 MIR583-201ENST00000384846 75 ntBASIC1.62□□□□□ -2.15
EXOSC3Q9NQT5 RNA5SP465-201ENST00000391195 109 ntBASIC1.62□□□□□ -2.15
EXOSC3Q9NQT5 AL512604.1-201ENST00000404812 257 ntBASIC1.62□□□□□ -2.15
EXOSC3Q9NQT5 AC123900.1-201ENST00000420390 96 ntBASIC1.62□□□□□ -2.15
EXOSC3Q9NQT5 AC139712.2-201ENST00000424302 339 ntBASIC1.62□□□□□ -2.15
EXOSC3Q9NQT5 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.62□□□□□ -2.15
EXOSC3Q9NQT5 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.62□□□□□ -2.15
EXOSC3Q9NQT5 AL035666.1-201ENST00000446195 348 ntBASIC1.62□□□□□ -2.15
EXOSC3Q9NQT5 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.62□□□□□ -2.15
EXOSC3Q9NQT5 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.62□□□□□ -2.15
EXOSC3Q9NQT5 RPL23AP3-201ENST00000453844 468 ntBASIC1.62□□□□□ -2.15
EXOSC3Q9NQT5 RPS29P11-201ENST00000496507 171 ntBASIC1.62□□□□□ -2.15
EXOSC3Q9NQT5 RNA5SP454-201ENST00000517231 127 ntBASIC1.62□□□□□ -2.15
EXOSC3Q9NQT5 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.62□□□□□ -2.15
EXOSC3Q9NQT5 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.62□□□□□ -2.15
EXOSC3Q9NQT5 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.62□□□□□ -2.15
EXOSC3Q9NQT5 BNIP3P10-201ENST00000605360 577 ntBASIC1.62□□□□□ -2.15
EXOSC3Q9NQT5 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.62□□□□□ -2.15
EXOSC3Q9NQT5 AC005562.2-201ENST00000618264 111 ntBASIC1.62□□□□□ -2.15
EXOSC3Q9NQT5 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.62□□□□□ -2.15
EXOSC3Q9NQT5 AL133216.2-202ENST00000634512 349 ntBASIC1.62□□□□□ -2.15
EXOSC3Q9NQT5 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.62□□□□□ -2.15
EXOSC3Q9NQT5 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.62□□□□□ -2.15
EXOSC3Q9NQT5 LINC02555-201ENST00000563933 1951 ntBASIC1.61□□□□□ -2.15
EXOSC3Q9NQT5 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
EXOSC3Q9NQT5 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.61□□□□□ -2.15
EXOSC3Q9NQT5 RNU6-545P-201ENST00000362681 104 ntBASIC1.61□□□□□ -2.15
EXOSC3Q9NQT5 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.61□□□□□ -2.15
EXOSC3Q9NQT5 AL356776.1-201ENST00000406574 447 ntBASIC1.61□□□□□ -2.15
EXOSC3Q9NQT5 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.61□□□□□ -2.15
EXOSC3Q9NQT5 RNA5SP501-201ENST00000410990 112 ntBASIC1.61□□□□□ -2.15
EXOSC3Q9NQT5 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.61□□□□□ -2.15
EXOSC3Q9NQT5 AL358453.1-201ENST00000422522 250 ntBASIC1.61□□□□□ -2.15
EXOSC3Q9NQT5 AC003989.2-201ENST00000440224 169 ntBASIC1.61□□□□□ -2.15
EXOSC3Q9NQT5 AC004386.2-201ENST00000441858 148 ntBASIC1.61□□□□□ -2.15
EXOSC3Q9NQT5 OR2AQ1P-201ENST00000451972 200 ntBASIC1.61□□□□□ -2.15
EXOSC3Q9NQT5 RNA5SP233-201ENST00000459153 113 ntBASIC1.61□□□□□ -2.15
EXOSC3Q9NQT5 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.61□□□□□ -2.15
EXOSC3Q9NQT5 AC018710.1-201ENST00000506509 158 ntBASIC1.61□□□□□ -2.15
EXOSC3Q9NQT5 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.61□□□□□ -2.15
EXOSC3Q9NQT5 Y_RNA.682-201ENST00000516457 100 ntBASIC1.61□□□□□ -2.15
EXOSC3Q9NQT5 RNU6-358P-201ENST00000516564 75 ntBASIC1.61□□□□□ -2.15
EXOSC3Q9NQT5 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.61□□□□□ -2.15
EXOSC3Q9NQT5 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.61□□□□□ -2.15
EXOSC3Q9NQT5 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.61□□□□□ -2.15
EXOSC3Q9NQT5 MIR4790-201ENST00000577799 79 ntBASIC1.61□□□□□ -2.15
EXOSC3Q9NQT5 MIR3169-201ENST00000578032 83 ntBASIC1.61□□□□□ -2.15
EXOSC3Q9NQT5 SNORA59B-202ENST00000578183 701 ntBASIC1.61□□□□□ -2.15
EXOSC3Q9NQT5 MIR5006-201ENST00000583027 110 ntBASIC1.61□□□□□ -2.15
EXOSC3Q9NQT5 AC060780.3-201ENST00000589464 80 ntBASIC1.61□□□□□ -2.15
EXOSC3Q9NQT5 AC243960.4-201ENST00000600532 288 ntBASIC1.61□□□□□ -2.15
EXOSC3Q9NQT5 AP003465.2-201ENST00000602571 373 ntBASIC1.61□□□□□ -2.15
EXOSC3Q9NQT5 AC092794.1-201ENST00000612734 582 ntBASIC1.61□□□□□ -2.15
EXOSC3Q9NQT5 MIR6128-201ENST00000615528 109 ntBASIC1.61□□□□□ -2.15
EXOSC3Q9NQT5 U6atac.1-201ENST00000616025 117 ntBASIC1.61□□□□□ -2.15
EXOSC3Q9NQT5 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.61□□□□□ -2.15
EXOSC3Q9NQT5 SNORD48-201ENST00000364953 64 ntBASIC1.6□□□□□ -2.15
EXOSC3Q9NQT5 SNORD31B-201ENST00000364977 69 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 153.1 ms