Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
TM9SF3Q9HD45 MTND3P9-201ENST00000429526 346 ntBASIC1.48□□□□□ -2.17
TM9SF3Q9HD45 AL589823.1-201ENST00000429577 183 ntBASIC1.48□□□□□ -2.17
TM9SF3Q9HD45 C8orf59P1-201ENST00000429930 303 ntBASIC1.48□□□□□ -2.17
TM9SF3Q9HD45 MTATP6P26-201ENST00000445926 662 ntBASIC1.48□□□□□ -2.17
TM9SF3Q9HD45 snoU13.6-201ENST00000458785 104 ntBASIC1.48□□□□□ -2.17
TM9SF3Q9HD45 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.48□□□□□ -2.17
TM9SF3Q9HD45 RNA5SP445-201ENST00000515889 115 ntBASIC1.48□□□□□ -2.17
TM9SF3Q9HD45 SUMO2P18-201ENST00000518873 252 ntBASIC1.48□□□□□ -2.17
TM9SF3Q9HD45 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.48□□□□□ -2.17
TM9SF3Q9HD45 MIR5094-201ENST00000578766 85 ntBASIC1.48□□□□□ -2.17
TM9SF3Q9HD45 MIR5692C1-201ENST00000585309 91 ntBASIC1.48□□□□□ -2.17
TM9SF3Q9HD45 AP001836.1-201ENST00000604675 523 ntBASIC1.48□□□□□ -2.17
TM9SF3Q9HD45 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
TM9SF3Q9HD45 AC048344.4-201ENST00000619744 527 ntBASIC1.48□□□□□ -2.17
TM9SF3Q9HD45 AP000560.1-201ENST00000624150 1937 ntBASIC1.48□□□□□ -2.17
TM9SF3Q9HD45 AP000648.3-201ENST00000623539 4507 ntBASIC1.48□□□□□ -2.17
TM9SF3Q9HD45 RNU6-1085P-201ENST00000363576 107 ntBASIC1.47□□□□□ -2.17
TM9SF3Q9HD45 RNU6-112P-201ENST00000363599 104 ntBASIC1.47□□□□□ -2.17
TM9SF3Q9HD45 Y_RNA.167-201ENST00000363735 109 ntBASIC1.47□□□□□ -2.17
TM9SF3Q9HD45 RNU6-1322P-201ENST00000364309 107 ntBASIC1.47□□□□□ -2.17
TM9SF3Q9HD45 RNU6-1317P-201ENST00000364582 104 ntBASIC1.47□□□□□ -2.17
TM9SF3Q9HD45 Y_RNA.436-201ENST00000384097 102 ntBASIC1.47□□□□□ -2.17
TM9SF3Q9HD45 MIR549A-201ENST00000385268 96 ntBASIC1.47□□□□□ -2.17
TM9SF3Q9HD45 RNU6-648P-201ENST00000410190 107 ntBASIC1.47□□□□□ -2.17
TM9SF3Q9HD45 RNU2-16P-201ENST00000410712 136 ntBASIC1.47□□□□□ -2.17
TM9SF3Q9HD45 MTCO3P41-201ENST00000414801 328 ntBASIC1.47□□□□□ -2.17
TM9SF3Q9HD45 RPL21P111-201ENST00000418453 477 ntBASIC1.47□□□□□ -2.17
TM9SF3Q9HD45 RPL23AP95-201ENST00000426806 265 ntBASIC1.47□□□□□ -2.17
TM9SF3Q9HD45 AL354695.1-201ENST00000427935 228 ntBASIC1.47□□□□□ -2.17
TM9SF3Q9HD45 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.47□□□□□ -2.17
TM9SF3Q9HD45 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.47□□□□□ -2.17
TM9SF3Q9HD45 Z83846.1-201ENST00000446798 265 ntBASIC1.47□□□□□ -2.17
TM9SF3Q9HD45 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.47□□□□□ -2.17
TM9SF3Q9HD45 AC083904.1-201ENST00000487828 231 ntBASIC1.47□□□□□ -2.17
TM9SF3Q9HD45 AC107401.1-201ENST00000503426 685 ntBASIC1.47□□□□□ -2.17
TM9SF3Q9HD45 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.47□□□□□ -2.17
TM9SF3Q9HD45 ATP5EP1-201ENST00000510257 156 ntBASIC1.47□□□□□ -2.17
TM9SF3Q9HD45 RNU6-1069P-201ENST00000516612 133 ntBASIC1.47□□□□□ -2.17
TM9SF3Q9HD45 RNU6-902P-201ENST00000517212 91 ntBASIC1.47□□□□□ -2.17
TM9SF3Q9HD45 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.47□□□□□ -2.17
TM9SF3Q9HD45 AL512360.1-201ENST00000555346 234 ntBASIC1.47□□□□□ -2.17
TM9SF3Q9HD45 AF250324.2-201ENST00000608299 610 ntBASIC1.47□□□□□ -2.17
TM9SF3Q9HD45 AL157834.3-201ENST00000615543 103 ntBASIC1.47□□□□□ -2.17
TM9SF3Q9HD45 AL359880.1-201ENST00000621879 266 ntBASIC1.47□□□□□ -2.17
TM9SF3Q9HD45 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.47□□□□□ -2.17
TM9SF3Q9HD45 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
TM9SF3Q9HD45 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.46□□□□□ -2.17
TM9SF3Q9HD45 SNORD33-201ENST00000362761 85 ntBASIC1.46□□□□□ -2.18
TM9SF3Q9HD45 Y_RNA.194-201ENST00000363985 102 ntBASIC1.46□□□□□ -2.18
TM9SF3Q9HD45 Y_RNA.269-201ENST00000364685 89 ntBASIC1.46□□□□□ -2.18
TM9SF3Q9HD45 RNU6-483P-201ENST00000384088 108 ntBASIC1.46□□□□□ -2.18
TM9SF3Q9HD45 Y_RNA.517-201ENST00000384551 106 ntBASIC1.46□□□□□ -2.18
TM9SF3Q9HD45 MIR320A-201ENST00000385302 82 ntBASIC1.46□□□□□ -2.18
TM9SF3Q9HD45 RNU2-41P-201ENST00000410991 178 ntBASIC1.46□□□□□ -2.18
TM9SF3Q9HD45 RPL30P13-201ENST00000418873 348 ntBASIC1.46□□□□□ -2.18
TM9SF3Q9HD45 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.46□□□□□ -2.18
TM9SF3Q9HD45 MTCO3P46-201ENST00000425787 232 ntBASIC1.46□□□□□ -2.18
TM9SF3Q9HD45 UBE2V1P8-201ENST00000437166 265 ntBASIC1.46□□□□□ -2.18
TM9SF3Q9HD45 AC019235.1-201ENST00000503847 207 ntBASIC1.46□□□□□ -2.18
TM9SF3Q9HD45 AC097473.1-201ENST00000508142 408 ntBASIC1.46□□□□□ -2.18
TM9SF3Q9HD45 AP003034.1-201ENST00000534621 422 ntBASIC1.46□□□□□ -2.18
TM9SF3Q9HD45 HMGB1P33-201ENST00000563485 527 ntBASIC1.46□□□□□ -2.18
TM9SF3Q9HD45 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.46□□□□□ -2.18
TM9SF3Q9HD45 Z98751.3-201ENST00000604447 521 ntBASIC1.46□□□□□ -2.18
TM9SF3Q9HD45 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.46□□□□□ -2.18
TM9SF3Q9HD45 AC103705.1-201ENST00000619013 241 ntBASIC1.46□□□□□ -2.18
TM9SF3Q9HD45 AL121890.5-201ENST00000620848 304 ntBASIC1.46□□□□□ -2.18
TM9SF3Q9HD45 AC009541.1-201ENST00000438279 2662 ntBASIC1.45□□□□□ -2.18
TM9SF3Q9HD45 RNU6-1252P-201ENST00000363054 104 ntBASIC1.45□□□□□ -2.18
TM9SF3Q9HD45 RNU6-271P-201ENST00000363858 105 ntBASIC1.45□□□□□ -2.18
TM9SF3Q9HD45 RNU6-1090P-201ENST00000364065 94 ntBASIC1.45□□□□□ -2.18
TM9SF3Q9HD45 Y_RNA.508-201ENST00000384502 114 ntBASIC1.45□□□□□ -2.18
TM9SF3Q9HD45 SNORA12.2-201ENST00000391040 156 ntBASIC1.45□□□□□ -2.18
TM9SF3Q9HD45 MIR1304-201ENST00000408243 91 ntBASIC1.45□□□□□ -2.18
TM9SF3Q9HD45 RNA5SP201-201ENST00000410316 124 ntBASIC1.45□□□□□ -2.18
TM9SF3Q9HD45 RN7SKP61-201ENST00000410642 295 ntBASIC1.45□□□□□ -2.18
TM9SF3Q9HD45 AL133396.1-201ENST00000432048 687 ntBASIC1.45□□□□□ -2.18
TM9SF3Q9HD45 SNRPEP8-201ENST00000442866 260 ntBASIC1.45□□□□□ -2.18
TM9SF3Q9HD45 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.45□□□□□ -2.18
TM9SF3Q9HD45 TOMM22P6-201ENST00000465035 409 ntBASIC1.45□□□□□ -2.18
TM9SF3Q9HD45 FO393415.2-201ENST00000480085 343 ntBASIC1.45□□□□□ -2.18
TM9SF3Q9HD45 AC023790.1-201ENST00000482174 347 ntBASIC1.45□□□□□ -2.18
TM9SF3Q9HD45 AC008628.2-201ENST00000502605 298 ntBASIC1.45□□□□□ -2.18
TM9SF3Q9HD45 SNORA19.2-201ENST00000516013 114 ntBASIC1.45□□□□□ -2.18
TM9SF3Q9HD45 Y_RNA.693-201ENST00000516641 110 ntBASIC1.45□□□□□ -2.18
TM9SF3Q9HD45 RNU6-1332P-201ENST00000516666 104 ntBASIC1.45□□□□□ -2.18
TM9SF3Q9HD45 RNU6-612P-201ENST00000516909 102 ntBASIC1.45□□□□□ -2.18
TM9SF3Q9HD45 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.45□□□□□ -2.18
TM9SF3Q9HD45 SNORA59B-202ENST00000578183 701 ntBASIC1.45□□□□□ -2.18
TM9SF3Q9HD45 CTHRC1P1-201ENST00000605383 469 ntBASIC1.45□□□□□ -2.18
TM9SF3Q9HD45 AC080013.6-201ENST00000606185 215 ntBASIC1.45□□□□□ -2.18
TM9SF3Q9HD45 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.45□□□□□ -2.18
TM9SF3Q9HD45 MIR8063-201ENST00000621930 81 ntBASIC1.45□□□□□ -2.18
TM9SF3Q9HD45 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
TM9SF3Q9HD45 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
TM9SF3Q9HD45 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
TM9SF3Q9HD45 RNU6-522P-201ENST00000364497 107 ntBASIC1.44□□□□□ -2.18
TM9SF3Q9HD45 RNU6-360P-201ENST00000390944 104 ntBASIC1.44□□□□□ -2.18
TM9SF3Q9HD45 MIR1276-201ENST00000408707 83 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms