Protein–RNA interactions for Protein: Q9HCL0

PCDH18, Protocadherin-18, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18Q9HCL0 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PCDH18Q9HCL0 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
PCDH18Q9HCL0 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
PCDH18Q9HCL0 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PCDH18Q9HCL0 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PCDH18Q9HCL0 AC110491.1-201ENST00000562191 2010 ntBASIC3.33□□□□□ -1.88
PCDH18Q9HCL0 SNORA71.3-201ENST00000362582 128 ntBASIC3.33□□□□□ -1.88
PCDH18Q9HCL0 RNU6-529P-201ENST00000363383 104 ntBASIC3.33□□□□□ -1.88
PCDH18Q9HCL0 RNU6-137P-201ENST00000363680 108 ntBASIC3.33□□□□□ -1.88
PCDH18Q9HCL0 Y_RNA.217-201ENST00000364214 105 ntBASIC3.33□□□□□ -1.88
PCDH18Q9HCL0 Y_RNA.240-201ENST00000364469 95 ntBASIC3.33□□□□□ -1.88
PCDH18Q9HCL0 Y_RNA.304-201ENST00000365011 112 ntBASIC3.33□□□□□ -1.88
PCDH18Q9HCL0 RNU6-1130P-201ENST00000365434 107 ntBASIC3.33□□□□□ -1.88
PCDH18Q9HCL0 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PCDH18Q9HCL0 RNU6-793P-201ENST00000384233 104 ntBASIC3.33□□□□□ -1.88
PCDH18Q9HCL0 RNU2-49P-201ENST00000410666 184 ntBASIC3.33□□□□□ -1.88
PCDH18Q9HCL0 RNA5SP344-201ENST00000411081 104 ntBASIC3.33□□□□□ -1.88
PCDH18Q9HCL0 RNU6-1135P-201ENST00000411083 103 ntBASIC3.33□□□□□ -1.88
PCDH18Q9HCL0 RNU6-1199P-201ENST00000411249 104 ntBASIC3.33□□□□□ -1.88
PCDH18Q9HCL0 AC023141.4-201ENST00000412031 328 ntBASIC3.33□□□□□ -1.88
PCDH18Q9HCL0 OOSP1P1-201ENST00000423265 274 ntBASIC3.33□□□□□ -1.88
PCDH18Q9HCL0 BTF3P11-201ENST00000426582 477 ntBASIC3.33□□□□□ -1.88
PCDH18Q9HCL0 AC244505.4-201ENST00000434905 287 ntBASIC3.33□□□□□ -1.88
PCDH18Q9HCL0 SSXP5-201ENST00000443473 287 ntBASIC3.33□□□□□ -1.88
PCDH18Q9HCL0 Y_RNA.641-201ENST00000459414 105 ntBASIC3.33□□□□□ -1.88
PCDH18Q9HCL0 AL121594.1-201ENST00000475906 575 ntBASIC3.33□□□□□ -1.88
PCDH18Q9HCL0 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.33□□□□□ -1.88
PCDH18Q9HCL0 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.33□□□□□ -1.88
PCDH18Q9HCL0 AC074133.1-201ENST00000515696 183 ntBASIC3.33□□□□□ -1.88
PCDH18Q9HCL0 RNA5SP54-201ENST00000516951 92 ntBASIC3.33□□□□□ -1.88
PCDH18Q9HCL0 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.33□□□□□ -1.88
PCDH18Q9HCL0 NACAP3-201ENST00000552100 481 ntBASIC3.33□□□□□ -1.88
PCDH18Q9HCL0 AC233702.2-202ENST00000562547 291 ntBASIC3.33□□□□□ -1.88
PCDH18Q9HCL0 AL137843.1-201ENST00000605078 385 ntBASIC3.33□□□□□ -1.88
PCDH18Q9HCL0 MIR7975-201ENST00000619350 68 ntBASIC3.33□□□□□ -1.88
PCDH18Q9HCL0 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PCDH18Q9HCL0 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.33□□□□□ -1.88
PCDH18Q9HCL0 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PCDH18Q9HCL0 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
PCDH18Q9HCL0 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PCDH18Q9HCL0 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
PCDH18Q9HCL0 Y_RNA.262-201ENST00000364641 102 ntBASIC3.32□□□□□ -1.88
PCDH18Q9HCL0 SNORD87-201ENST00000364849 89 ntBASIC3.32□□□□□ -1.88
PCDH18Q9HCL0 SNORA51.4-201ENST00000364993 124 ntBASIC3.32□□□□□ -1.88
PCDH18Q9HCL0 Y_RNA.415-201ENST00000384012 112 ntBASIC3.32□□□□□ -1.88
PCDH18Q9HCL0 U3.26-201ENST00000391236 204 ntBASIC3.32□□□□□ -1.88
PCDH18Q9HCL0 SNORA26.7-201ENST00000391288 122 ntBASIC3.32□□□□□ -1.88
PCDH18Q9HCL0 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.32□□□□□ -1.88
PCDH18Q9HCL0 RNA5SP217-201ENST00000515959 91 ntBASIC3.32□□□□□ -1.88
PCDH18Q9HCL0 RNU5F-2P-201ENST00000516066 82 ntBASIC3.32□□□□□ -1.88
PCDH18Q9HCL0 MIR4444-1-201ENST00000581696 74 ntBASIC3.32□□□□□ -1.88
PCDH18Q9HCL0 MIR4444-2-201ENST00000584390 74 ntBASIC3.32□□□□□ -1.88
PCDH18Q9HCL0 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.32□□□□□ -1.88
PCDH18Q9HCL0 AL008718.3-201ENST00000610217 321 ntBASIC3.32□□□□□ -1.88
PCDH18Q9HCL0 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.32□□□□□ -1.88
PCDH18Q9HCL0 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
PCDH18Q9HCL0 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
PCDH18Q9HCL0 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.31□□□□□ -1.88
PCDH18Q9HCL0 SNORD116-18-201ENST00000383961 92 ntBASIC3.31□□□□□ -1.88
PCDH18Q9HCL0 AL357139.1-201ENST00000407792 426 ntBASIC3.31□□□□□ -1.88
PCDH18Q9HCL0 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.31□□□□□ -1.88
PCDH18Q9HCL0 RNU6-394P-201ENST00000410735 107 ntBASIC3.31□□□□□ -1.88
PCDH18Q9HCL0 RNU5E-9P-201ENST00000411164 104 ntBASIC3.31□□□□□ -1.88
PCDH18Q9HCL0 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.31□□□□□ -1.88
PCDH18Q9HCL0 Z75741.1-201ENST00000446793 314 ntBASIC3.31□□□□□ -1.88
PCDH18Q9HCL0 AC146507.2-201ENST00000460608 476 ntBASIC3.31□□□□□ -1.88
PCDH18Q9HCL0 AC091153.1-201ENST00000466297 402 ntBASIC3.31□□□□□ -1.88
PCDH18Q9HCL0 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.31□□□□□ -1.88
PCDH18Q9HCL0 MIR4429-201ENST00000580105 73 ntBASIC3.31□□□□□ -1.88
PCDH18Q9HCL0 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.31□□□□□ -1.88
PCDH18Q9HCL0 uc_338.25-201ENST00000613756 156 ntBASIC3.31□□□□□ -1.88
PCDH18Q9HCL0 AC018692.3-201ENST00000623929 123 ntBASIC3.31□□□□□ -1.88
PCDH18Q9HCL0 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
PCDH18Q9HCL0 AC004944.1-201ENST00000517807 3059 ntBASIC3.31□□□□□ -1.88
PCDH18Q9HCL0 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.31□□□□□ -1.88
PCDH18Q9HCL0 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.31□□□□□ -1.88
PCDH18Q9HCL0 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.31□□□□□ -1.88
PCDH18Q9HCL0 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PCDH18Q9HCL0 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.3□□□□□ -1.88
PCDH18Q9HCL0 Y_RNA.40-201ENST00000362645 93 ntBASIC3.3□□□□□ -1.88
PCDH18Q9HCL0 RNU6-324P-201ENST00000363957 106 ntBASIC3.3□□□□□ -1.88
PCDH18Q9HCL0 RNU6-704P-201ENST00000364162 103 ntBASIC3.3□□□□□ -1.88
PCDH18Q9HCL0 RNU6-818P-201ENST00000364837 108 ntBASIC3.3□□□□□ -1.88
PCDH18Q9HCL0 Y_RNA.329-201ENST00000365209 107 ntBASIC3.3□□□□□ -1.88
PCDH18Q9HCL0 U8.9-201ENST00000365667 134 ntBASIC3.3□□□□□ -1.88
PCDH18Q9HCL0 RPL21P3-201ENST00000395517 478 ntBASIC3.3□□□□□ -1.88
PCDH18Q9HCL0 CBX3P9-201ENST00000402326 552 ntBASIC3.3□□□□□ -1.88
PCDH18Q9HCL0 RNA5SP390-201ENST00000410191 113 ntBASIC3.3□□□□□ -1.88
PCDH18Q9HCL0 RNU2-2P-201ENST00000410396 191 ntBASIC3.3□□□□□ -1.88
PCDH18Q9HCL0 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.3□□□□□ -1.88
PCDH18Q9HCL0 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDH18Q9HCL0 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDH18Q9HCL0 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.3□□□□□ -1.88
PCDH18Q9HCL0 AIG1P1-201ENST00000503376 148 ntBASIC3.3□□□□□ -1.88
PCDH18Q9HCL0 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDH18Q9HCL0 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDH18Q9HCL0 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.3□□□□□ -1.88
PCDH18Q9HCL0 MIR4474-201ENST00000579189 78 ntBASIC3.3□□□□□ -1.88
PCDH18Q9HCL0 RNU2-4P-201ENST00000606190 192 ntBASIC3.3□□□□□ -1.88
PCDH18Q9HCL0 U2.15-201ENST00000611544 191 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms