Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 RNU6-510P-201ENST00000391239 108 ntBASIC1.83□□□□□ -2.12
VIPAS39Q9H9C1 AL023284.1-201ENST00000403956 276 ntBASIC1.83□□□□□ -2.12
VIPAS39Q9H9C1 MIR1283-2-201ENST00000408621 87 ntBASIC1.83□□□□□ -2.12
VIPAS39Q9H9C1 RNU2-2P-201ENST00000410396 191 ntBASIC1.83□□□□□ -2.12
VIPAS39Q9H9C1 MTND1P2-201ENST00000430604 821 ntBASIC1.83□□□□□ -2.12
VIPAS39Q9H9C1 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.83□□□□□ -2.12
VIPAS39Q9H9C1 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.83□□□□□ -2.12
VIPAS39Q9H9C1 RPS23P5-201ENST00000495419 428 ntBASIC1.83□□□□□ -2.12
VIPAS39Q9H9C1 RNU1-54P-201ENST00000517181 120 ntBASIC1.83□□□□□ -2.12
VIPAS39Q9H9C1 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.83□□□□□ -2.12
VIPAS39Q9H9C1 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.83□□□□□ -2.12
VIPAS39Q9H9C1 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.83□□□□□ -2.12
VIPAS39Q9H9C1 AC016256.1-201ENST00000547971 354 ntBASIC1.83□□□□□ -2.12
VIPAS39Q9H9C1 MIR4513-201ENST00000581077 86 ntBASIC1.83□□□□□ -2.12
VIPAS39Q9H9C1 MIR4273-201ENST00000582824 84 ntBASIC1.83□□□□□ -2.12
VIPAS39Q9H9C1 AL022345.1-201ENST00000607292 135 ntBASIC1.83□□□□□ -2.12
VIPAS39Q9H9C1 AC009318.2-201ENST00000610917 651 ntBASIC1.83□□□□□ -2.12
VIPAS39Q9H9C1 U2.15-201ENST00000611544 191 ntBASIC1.83□□□□□ -2.12
VIPAS39Q9H9C1 U2.16-201ENST00000613119 191 ntBASIC1.83□□□□□ -2.12
VIPAS39Q9H9C1 U2.12-201ENST00000613778 191 ntBASIC1.83□□□□□ -2.12
VIPAS39Q9H9C1 U2.20-201ENST00000613956 192 ntBASIC1.83□□□□□ -2.12
VIPAS39Q9H9C1 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.83□□□□□ -2.12
VIPAS39Q9H9C1 U2.9-201ENST00000615427 191 ntBASIC1.83□□□□□ -2.12
VIPAS39Q9H9C1 U2.11-201ENST00000616345 191 ntBASIC1.83□□□□□ -2.12
VIPAS39Q9H9C1 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.83□□□□□ -2.12
VIPAS39Q9H9C1 U2.2-201ENST00000616535 191 ntBASIC1.83□□□□□ -2.12
VIPAS39Q9H9C1 U2.3-201ENST00000617785 191 ntBASIC1.83□□□□□ -2.12
VIPAS39Q9H9C1 U2.19-201ENST00000618602 191 ntBASIC1.83□□□□□ -2.12
VIPAS39Q9H9C1 RNU2-1-201ENST00000618664 191 ntBASIC1.83□□□□□ -2.12
VIPAS39Q9H9C1 U2.6-201ENST00000619225 191 ntBASIC1.83□□□□□ -2.12
VIPAS39Q9H9C1 U2.5-201ENST00000619465 191 ntBASIC1.83□□□□□ -2.12
VIPAS39Q9H9C1 U2.10-201ENST00000620268 191 ntBASIC1.83□□□□□ -2.12
VIPAS39Q9H9C1 AC130454.1-201ENST00000622948 401 ntBASIC1.83□□□□□ -2.12
VIPAS39Q9H9C1 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.83□□□□□ -2.12
VIPAS39Q9H9C1 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
VIPAS39Q9H9C1 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.83□□□□□ -2.12
VIPAS39Q9H9C1 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
VIPAS39Q9H9C1 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
VIPAS39Q9H9C1 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
VIPAS39Q9H9C1 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
VIPAS39Q9H9C1 Y_RNA.99-201ENST00000363138 105 ntBASIC1.82□□□□□ -2.12
VIPAS39Q9H9C1 MIR32-201ENST00000384965 70 ntBASIC1.82□□□□□ -2.12
VIPAS39Q9H9C1 MIR29C-201ENST00000385231 88 ntBASIC1.82□□□□□ -2.12
VIPAS39Q9H9C1 MIR548F5-201ENST00000408421 86 ntBASIC1.82□□□□□ -2.12
VIPAS39Q9H9C1 MTND3P8-201ENST00000412909 339 ntBASIC1.82□□□□□ -2.12
VIPAS39Q9H9C1 AC139712.2-201ENST00000424302 339 ntBASIC1.82□□□□□ -2.12
VIPAS39Q9H9C1 DAP3P1-201ENST00000441522 278 ntBASIC1.82□□□□□ -2.12
VIPAS39Q9H9C1 AL035666.1-201ENST00000446195 348 ntBASIC1.82□□□□□ -2.12
VIPAS39Q9H9C1 MTND1P17-201ENST00000448961 204 ntBASIC1.82□□□□□ -2.12
VIPAS39Q9H9C1 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.82□□□□□ -2.12
VIPAS39Q9H9C1 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.82□□□□□ -2.12
VIPAS39Q9H9C1 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.82□□□□□ -2.12
VIPAS39Q9H9C1 AC005034.5-201ENST00000604219 466 ntBASIC1.82□□□□□ -2.12
VIPAS39Q9H9C1 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.82□□□□□ -2.12
VIPAS39Q9H9C1 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
VIPAS39Q9H9C1 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
VIPAS39Q9H9C1 MTND5P9-201ENST00000503854 1755 ntBASIC1.81□□□□□ -2.12
VIPAS39Q9H9C1 RNU1-58P-201ENST00000362413 163 ntBASIC1.81□□□□□ -2.12
VIPAS39Q9H9C1 RNU6-23P-201ENST00000363283 107 ntBASIC1.81□□□□□ -2.12
VIPAS39Q9H9C1 RNU6-1026P-201ENST00000384465 108 ntBASIC1.81□□□□□ -2.12
VIPAS39Q9H9C1 Y_RNA.533-201ENST00000384596 114 ntBASIC1.81□□□□□ -2.12
VIPAS39Q9H9C1 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.81□□□□□ -2.12
VIPAS39Q9H9C1 AL139396.1-201ENST00000421137 167 ntBASIC1.81□□□□□ -2.12
VIPAS39Q9H9C1 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.81□□□□□ -2.12
VIPAS39Q9H9C1 AL358453.1-201ENST00000422522 250 ntBASIC1.81□□□□□ -2.12
VIPAS39Q9H9C1 AC004386.2-201ENST00000441858 148 ntBASIC1.81□□□□□ -2.12
VIPAS39Q9H9C1 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.81□□□□□ -2.12
VIPAS39Q9H9C1 OR2AQ1P-201ENST00000451972 200 ntBASIC1.81□□□□□ -2.12
VIPAS39Q9H9C1 MTCO3P8-201ENST00000453691 755 ntBASIC1.81□□□□□ -2.12
VIPAS39Q9H9C1 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.81□□□□□ -2.12
VIPAS39Q9H9C1 MTND5P5-201ENST00000503764 376 ntBASIC1.81□□□□□ -2.12
VIPAS39Q9H9C1 RPL23AP94-201ENST00000512518 302 ntBASIC1.81□□□□□ -2.12
VIPAS39Q9H9C1 RNU7-30P-201ENST00000516835 62 ntBASIC1.81□□□□□ -2.12
VIPAS39Q9H9C1 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.81□□□□□ -2.12
VIPAS39Q9H9C1 AC104581.2-201ENST00000572227 430 ntBASIC1.81□□□□□ -2.12
VIPAS39Q9H9C1 MIR5006-201ENST00000583027 110 ntBASIC1.81□□□□□ -2.12
VIPAS39Q9H9C1 AC005296.1-201ENST00000616145 209 ntBASIC1.81□□□□□ -2.12
VIPAS39Q9H9C1 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.81□□□□□ -2.12
VIPAS39Q9H9C1 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.81□□□□□ -2.12
VIPAS39Q9H9C1 MIR219B-201ENST00000637023 88 ntBASIC1.81□□□□□ -2.12
VIPAS39Q9H9C1 ZNF204P-201ENST00000416749 2397 ntBASIC1.8□□□□□ -2.12
VIPAS39Q9H9C1 RNA5SP493-201ENST00000364115 91 ntBASIC1.8□□□□□ -2.12
VIPAS39Q9H9C1 Y_RNA.332-201ENST00000365271 113 ntBASIC1.8□□□□□ -2.12
VIPAS39Q9H9C1 MT-TL1-201ENST00000386347 75 ntBASIC1.8□□□□□ -2.12
VIPAS39Q9H9C1 SNORA40.19-201ENST00000390846 128 ntBASIC1.8□□□□□ -2.12
VIPAS39Q9H9C1 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
VIPAS39Q9H9C1 RN7SKP284-201ENST00000411002 343 ntBASIC1.8□□□□□ -2.12
VIPAS39Q9H9C1 RPS3AP52-201ENST00000435639 297 ntBASIC1.8□□□□□ -2.12
VIPAS39Q9H9C1 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.8□□□□□ -2.12
VIPAS39Q9H9C1 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.8□□□□□ -2.12
VIPAS39Q9H9C1 AL158827.2-201ENST00000602494 330 ntBASIC1.8□□□□□ -2.12
VIPAS39Q9H9C1 AC005562.2-201ENST00000618264 111 ntBASIC1.8□□□□□ -2.12
VIPAS39Q9H9C1 AL691447.3-201ENST00000635020 330 ntBASIC1.8□□□□□ -2.12
VIPAS39Q9H9C1 LINC02555-201ENST00000563933 1951 ntBASIC1.79□□□□□ -2.12
VIPAS39Q9H9C1 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
VIPAS39Q9H9C1 RNU1-76P-201ENST00000362903 159 ntBASIC1.79□□□□□ -2.12
VIPAS39Q9H9C1 RNU6-842P-201ENST00000384269 107 ntBASIC1.79□□□□□ -2.12
VIPAS39Q9H9C1 RNU6-160P-201ENST00000384591 107 ntBASIC1.79□□□□□ -2.12
VIPAS39Q9H9C1 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.79□□□□□ -2.12
VIPAS39Q9H9C1 AC004866.1-201ENST00000411748 78 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 138.5 ms