Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AC023824.2-201ENST00000566185 400 ntBASIC2.76□□□□□ -1.97
EBF3Q9H4W6 AC010928.2-201ENST00000588017 287 ntBASIC2.76□□□□□ -1.97
EBF3Q9H4W6 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.76□□□□□ -1.97
EBF3Q9H4W6 LINC02555-201ENST00000563933 1951 ntBASIC2.75□□□□□ -1.97
EBF3Q9H4W6 RNU6-222P-201ENST00000362438 107 ntBASIC2.75□□□□□ -1.97
EBF3Q9H4W6 RNU6-1266P-201ENST00000362794 105 ntBASIC2.75□□□□□ -1.97
EBF3Q9H4W6 RNU6-227P-201ENST00000362865 103 ntBASIC2.75□□□□□ -1.97
EBF3Q9H4W6 RNU6-942P-201ENST00000363002 107 ntBASIC2.75□□□□□ -1.97
EBF3Q9H4W6 RNU6-187P-201ENST00000384139 106 ntBASIC2.75□□□□□ -1.97
EBF3Q9H4W6 RNU6-937P-201ENST00000384325 106 ntBASIC2.75□□□□□ -1.97
EBF3Q9H4W6 RNY3P4-201ENST00000384428 101 ntBASIC2.75□□□□□ -1.97
EBF3Q9H4W6 SNORA19-201ENST00000384737 128 ntBASIC2.75□□□□□ -1.97
EBF3Q9H4W6 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.75□□□□□ -1.97
EBF3Q9H4W6 TOMM22P6-201ENST00000465035 409 ntBASIC2.75□□□□□ -1.97
EBF3Q9H4W6 AC008413.1-201ENST00000511864 177 ntBASIC2.75□□□□□ -1.97
EBF3Q9H4W6 SNORA31.6-201ENST00000516241 130 ntBASIC2.75□□□□□ -1.97
EBF3Q9H4W6 RNU6-1012P-201ENST00000516606 109 ntBASIC2.75□□□□□ -1.97
EBF3Q9H4W6 SNORA43.2-201ENST00000516652 128 ntBASIC2.75□□□□□ -1.97
EBF3Q9H4W6 RNU6-255P-201ENST00000516957 105 ntBASIC2.75□□□□□ -1.97
EBF3Q9H4W6 RNU6-56P-201ENST00000516986 93 ntBASIC2.75□□□□□ -1.97
EBF3Q9H4W6 AC093023.1-201ENST00000547375 507 ntBASIC2.75□□□□□ -1.97
EBF3Q9H4W6 AL391261.3-201ENST00000557194 520 ntBASIC2.75□□□□□ -1.97
EBF3Q9H4W6 AL356575.1-201ENST00000603008 283 ntBASIC2.75□□□□□ -1.97
EBF3Q9H4W6 AC240442.1-201ENST00000616055 283 ntBASIC2.75□□□□□ -1.97
EBF3Q9H4W6 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.75□□□□□ -1.97
EBF3Q9H4W6 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.75□□□□□ -1.97
EBF3Q9H4W6 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.75□□□□□ -1.97
EBF3Q9H4W6 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
EBF3Q9H4W6 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.74□□□□□ -1.97
EBF3Q9H4W6 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
EBF3Q9H4W6 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.74□□□□□ -1.97
EBF3Q9H4W6 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
EBF3Q9H4W6 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.74□□□□□ -1.97
EBF3Q9H4W6 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
EBF3Q9H4W6 Y_RNA.76-201ENST00000362931 109 ntBASIC2.74□□□□□ -1.97
EBF3Q9H4W6 SNORD81.1-201ENST00000363064 77 ntBASIC2.74□□□□□ -1.97
EBF3Q9H4W6 U3.13-201ENST00000364804 214 ntBASIC2.74□□□□□ -1.97
EBF3Q9H4W6 RNU6-898P-201ENST00000365627 104 ntBASIC2.74□□□□□ -1.97
EBF3Q9H4W6 Y_RNA.581-201ENST00000391017 97 ntBASIC2.74□□□□□ -1.97
EBF3Q9H4W6 RNU6-493P-201ENST00000391321 108 ntBASIC2.74□□□□□ -1.97
EBF3Q9H4W6 MTCYBP2-201ENST00000407745 171 ntBASIC2.74□□□□□ -1.97
EBF3Q9H4W6 Y_RNA.602-201ENST00000410535 92 ntBASIC2.74□□□□□ -1.97
EBF3Q9H4W6 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.74□□□□□ -1.97
EBF3Q9H4W6 AL358453.1-201ENST00000422522 250 ntBASIC2.74□□□□□ -1.97
EBF3Q9H4W6 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.74□□□□□ -1.97
EBF3Q9H4W6 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.74□□□□□ -1.97
EBF3Q9H4W6 RPS23P5-201ENST00000495419 428 ntBASIC2.74□□□□□ -1.97
EBF3Q9H4W6 RNU4-71P-201ENST00000516258 113 ntBASIC2.74□□□□□ -1.97
EBF3Q9H4W6 AC027176.1-201ENST00000560204 514 ntBASIC2.74□□□□□ -1.97
EBF3Q9H4W6 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.74□□□□□ -1.97
EBF3Q9H4W6 RPL23AP78-201ENST00000599928 470 ntBASIC2.74□□□□□ -1.97
EBF3Q9H4W6 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
EBF3Q9H4W6 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
EBF3Q9H4W6 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.74□□□□□ -1.97
EBF3Q9H4W6 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.74□□□□□ -1.97
EBF3Q9H4W6 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.73□□□□□ -1.97
EBF3Q9H4W6 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
EBF3Q9H4W6 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
EBF3Q9H4W6 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.73□□□□□ -1.97
EBF3Q9H4W6 Y_RNA.200-201ENST00000364018 102 ntBASIC2.73□□□□□ -1.97
EBF3Q9H4W6 BPY2DP-201ENST00000422208 265 ntBASIC2.73□□□□□ -1.97
EBF3Q9H4W6 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.73□□□□□ -1.97
EBF3Q9H4W6 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.73□□□□□ -1.97
EBF3Q9H4W6 AL392103.1-201ENST00000447000 198 ntBASIC2.73□□□□□ -1.97
EBF3Q9H4W6 HMGN2P10-201ENST00000448085 265 ntBASIC2.73□□□□□ -1.97
EBF3Q9H4W6 HSPE1P25-201ENST00000455484 251 ntBASIC2.73□□□□□ -1.97
EBF3Q9H4W6 RPL26P9-201ENST00000457466 433 ntBASIC2.73□□□□□ -1.97
EBF3Q9H4W6 ANXA2P1-201ENST00000505539 926 ntBASIC2.73□□□□□ -1.97
EBF3Q9H4W6 RNU6-496P-201ENST00000516145 99 ntBASIC2.73□□□□□ -1.97
EBF3Q9H4W6 AC010186.2-204ENST00000537668 439 ntBASIC2.73□□□□□ -1.97
EBF3Q9H4W6 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.73□□□□□ -1.97
EBF3Q9H4W6 BX284668.6-201ENST00000606899 438 ntBASIC2.73□□□□□ -1.97
EBF3Q9H4W6 AC097372.5-201ENST00000623665 376 ntBASIC2.73□□□□□ -1.97
EBF3Q9H4W6 AC073308.1-201ENST00000623696 305 ntBASIC2.73□□□□□ -1.97
EBF3Q9H4W6 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.73□□□□□ -1.97
EBF3Q9H4W6 AC110491.1-201ENST00000562191 2010 ntBASIC2.73□□□□□ -1.97
EBF3Q9H4W6 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.73□□□□□ -1.97
EBF3Q9H4W6 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
EBF3Q9H4W6 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.72□□□□□ -1.97
EBF3Q9H4W6 AC010680.1-201ENST00000590024 3590 ntBASIC2.72□□□□□ -1.97
EBF3Q9H4W6 RNU6-1301P-201ENST00000362724 104 ntBASIC2.72□□□□□ -1.97
EBF3Q9H4W6 SNORD113-8-201ENST00000363497 74 ntBASIC2.72□□□□□ -1.97
EBF3Q9H4W6 RNU6-105P-201ENST00000363909 104 ntBASIC2.72□□□□□ -1.97
EBF3Q9H4W6 Y_RNA.270-201ENST00000364693 104 ntBASIC2.72□□□□□ -1.97
EBF3Q9H4W6 RNU1-100P-201ENST00000365255 165 ntBASIC2.72□□□□□ -1.97
EBF3Q9H4W6 RNU6-318P-201ENST00000384283 103 ntBASIC2.72□□□□□ -1.97
EBF3Q9H4W6 MIR592-201ENST00000384959 97 ntBASIC2.72□□□□□ -1.97
EBF3Q9H4W6 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.72□□□□□ -1.97
EBF3Q9H4W6 MTCO2P33-201ENST00000402100 465 ntBASIC2.72□□□□□ -1.97
EBF3Q9H4W6 MIR1261-201ENST00000408659 82 ntBASIC2.72□□□□□ -1.97
EBF3Q9H4W6 MIR1298-201ENST00000408783 112 ntBASIC2.72□□□□□ -1.97
EBF3Q9H4W6 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.72□□□□□ -1.97
EBF3Q9H4W6 AC104332.1-201ENST00000440471 797 ntBASIC2.72□□□□□ -1.97
EBF3Q9H4W6 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
EBF3Q9H4W6 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.72□□□□□ -1.97
EBF3Q9H4W6 RNU7-175P-201ENST00000515915 61 ntBASIC2.72□□□□□ -1.97
EBF3Q9H4W6 Y_RNA.706-201ENST00000516933 99 ntBASIC2.72□□□□□ -1.97
EBF3Q9H4W6 SNORA31.18-201ENST00000517043 134 ntBASIC2.72□□□□□ -1.97
EBF3Q9H4W6 RNU6-789P-201ENST00000517105 102 ntBASIC2.72□□□□□ -1.97
EBF3Q9H4W6 CBX3P4-201ENST00000538909 354 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 143.4 ms