Protein–RNA interactions for Protein: Q9H4L4

SENP3, Sentrin-specific protease 3, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3Q9H4L4 RNA5SP129-201ENST00000410276 118 ntBASIC7.52□□□□□ -1.21
SENP3Q9H4L4 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC7.52□□□□□ -1.21
SENP3Q9H4L4 AP002884.2-201ENST00000471647 395 ntBASIC7.52□□□□□ -1.21
SENP3Q9H4L4 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC7.52□□□□□ -1.21
SENP3Q9H4L4 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC7.52□□□□□ -1.21
SENP3Q9H4L4 AC093591.2-201ENST00000565254 3843 ntBASIC7.52□□□□□ -1.21
SENP3Q9H4L4 AP001005.3-201ENST00000622049 129 ntBASIC7.52□□□□□ -1.21
SENP3Q9H4L4 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
SENP3Q9H4L4 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC7.51□□□□□ -1.21
SENP3Q9H4L4 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SENP3Q9H4L4 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SENP3Q9H4L4 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SENP3Q9H4L4 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
SENP3Q9H4L4 SNORA24-201ENST00000384096 131 ntBASIC7.51□□□□□ -1.21
SENP3Q9H4L4 RNA5SP310-201ENST00000459084 116 ntBASIC7.51□□□□□ -1.21
SENP3Q9H4L4 MIR466-201ENST00000580653 84 ntBASIC7.51□□□□□ -1.21
SENP3Q9H4L4 AC069114.2-201ENST00000604699 304 ntBASIC7.51□□□□□ -1.21
SENP3Q9H4L4 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC7.51□□□□□ -1.21
SENP3Q9H4L4 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SENP3Q9H4L4 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC7.51□□□□□ -1.21
SENP3Q9H4L4 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
SENP3Q9H4L4 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC7.51□□□□□ -1.21
SENP3Q9H4L4 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
SENP3Q9H4L4 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC7.51□□□□□ -1.21
SENP3Q9H4L4 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SENP3Q9H4L4 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SENP3Q9H4L4 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SENP3Q9H4L4 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SENP3Q9H4L4 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
SENP3Q9H4L4 RNU6-1187P-201ENST00000364771 110 ntBASIC7.5□□□□□ -1.21
SENP3Q9H4L4 TRBV12-1-201ENST00000479785 344 ntBASIC7.5□□□□□ -1.21
SENP3Q9H4L4 KRTAP5-14P-201ENST00000502328 121 ntBASIC7.5□□□□□ -1.21
SENP3Q9H4L4 RNU6-75P-201ENST00000515944 104 ntBASIC7.5□□□□□ -1.21
SENP3Q9H4L4 RNU7-28P-201ENST00000516759 62 ntBASIC7.5□□□□□ -1.21
SENP3Q9H4L4 TEK-204ENST00000519097 3836 ntTSL 2 BASIC7.5□□□□□ -1.21
SENP3Q9H4L4 MIR5096-201ENST00000583713 70 ntBASIC7.5□□□□□ -1.21
SENP3Q9H4L4 AL356280.1-201ENST00000603614 379 ntBASIC7.5□□□□□ -1.21
SENP3Q9H4L4 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
SENP3Q9H4L4 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SENP3Q9H4L4 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC7.5□□□□□ -1.21
SENP3Q9H4L4 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC7.49□□□□□ -1.21
SENP3Q9H4L4 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
SENP3Q9H4L4 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
SENP3Q9H4L4 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SENP3Q9H4L4 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
SENP3Q9H4L4 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SENP3Q9H4L4 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC7.49□□□□□ -1.21
SENP3Q9H4L4 SNRPGP12-201ENST00000449481 213 ntBASIC7.49□□□□□ -1.21
SENP3Q9H4L4 SNORA84-201ENST00000459229 133 ntBASIC7.49□□□□□ -1.21
SENP3Q9H4L4 PHBP14-201ENST00000512887 367 ntBASIC7.49□□□□□ -1.21
SENP3Q9H4L4 AC122688.1-201ENST00000541494 223 ntBASIC7.49□□□□□ -1.21
SENP3Q9H4L4 AL357312.1-201ENST00000603879 298 ntBASIC7.49□□□□□ -1.21
SENP3Q9H4L4 AC104260.2-201ENST00000623551 3497 ntBASIC7.49□□□□□ -1.21
SENP3Q9H4L4 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
SENP3Q9H4L4 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC7.49□□□□□ -1.21
SENP3Q9H4L4 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SENP3Q9H4L4 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SENP3Q9H4L4 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SENP3Q9H4L4 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
SENP3Q9H4L4 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SENP3Q9H4L4 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SENP3Q9H4L4 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
SENP3Q9H4L4 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
SENP3Q9H4L4 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SENP3Q9H4L4 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC7.48□□□□□ -1.21
SENP3Q9H4L4 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SENP3Q9H4L4 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
SENP3Q9H4L4 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
SENP3Q9H4L4 RNA5SP428-201ENST00000365129 132 ntBASIC7.48□□□□□ -1.21
SENP3Q9H4L4 RNU7-23P-201ENST00000459465 62 ntBASIC7.48□□□□□ -1.21
SENP3Q9H4L4 AC023424.1-201ENST00000496058 459 ntBASIC7.48□□□□□ -1.21
SENP3Q9H4L4 AL163195.1-201ENST00000496941 348 ntBASIC7.48□□□□□ -1.21
SENP3Q9H4L4 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
SENP3Q9H4L4 MIR4429-201ENST00000580105 73 ntBASIC7.48□□□□□ -1.21
SENP3Q9H4L4 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC7.48□□□□□ -1.21
SENP3Q9H4L4 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC7.48□□□□□ -1.21
SENP3Q9H4L4 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SENP3Q9H4L4 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
SENP3Q9H4L4 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SENP3Q9H4L4 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
SENP3Q9H4L4 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
SENP3Q9H4L4 MIRLET7F1-201ENST00000362202 87 ntBASIC7.47□□□□□ -1.21
SENP3Q9H4L4 SNORD113-4-201ENST00000364802 75 ntBASIC7.47□□□□□ -1.21
SENP3Q9H4L4 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC7.47□□□□□ -1.21
SENP3Q9H4L4 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC7.47□□□□□ -1.21
SENP3Q9H4L4 HMGN2P21-201ENST00000447764 270 ntBASIC7.47□□□□□ -1.21
SENP3Q9H4L4 AC140172.1-201ENST00000502928 141 ntBASIC7.47□□□□□ -1.21
SENP3Q9H4L4 RNU6-850P-201ENST00000516934 103 ntBASIC7.47□□□□□ -1.21
SENP3Q9H4L4 AC090897.1-201ENST00000580909 226 ntBASIC7.47□□□□□ -1.21
SENP3Q9H4L4 SNORD92-201ENST00000585078 85 ntBASIC7.47□□□□□ -1.21
SENP3Q9H4L4 MIR6780A-201ENST00000615089 68 ntBASIC7.47□□□□□ -1.21
SENP3Q9H4L4 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC7.47□□□□□ -1.21
SENP3Q9H4L4 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
SENP3Q9H4L4 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
SENP3Q9H4L4 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
SENP3Q9H4L4 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SENP3Q9H4L4 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SENP3Q9H4L4 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC7.46□□□□□ -1.21
SENP3Q9H4L4 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
SENP3Q9H4L4 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 147.2 ms