Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AC018638.8-201ENST00000588755 281 ntBASIC1.39□□□□□ -2.19
HDHD3Q9BSH5 AC146944.4-201ENST00000602697 718 ntBASIC1.39□□□□□ -2.19
HDHD3Q9BSH5 RPL17P51-201ENST00000605218 238 ntBASIC1.39□□□□□ -2.19
HDHD3Q9BSH5 AL773524.1-201ENST00000614065 229 ntBASIC1.39□□□□□ -2.19
HDHD3Q9BSH5 AL590240.4-201ENST00000616908 390 ntBASIC1.39□□□□□ -2.19
HDHD3Q9BSH5 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.39□□□□□ -2.19
HDHD3Q9BSH5 AC009033.1-201ENST00000624279 431 ntBASIC1.39□□□□□ -2.19
HDHD3Q9BSH5 AC100810.6-201ENST00000638068 285 ntBASIC1.39□□□□□ -2.19
HDHD3Q9BSH5 LINC02555-201ENST00000563933 1951 ntBASIC1.39□□□□□ -2.19
HDHD3Q9BSH5 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.38□□□□□ -2.19
HDHD3Q9BSH5 MTND4P5-201ENST00000435821 1374 ntBASIC1.38□□□□□ -2.19
HDHD3Q9BSH5 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
HDHD3Q9BSH5 SNORD31B-201ENST00000364977 69 ntBASIC1.38□□□□□ -2.19
HDHD3Q9BSH5 RNU6-968P-201ENST00000384076 107 ntBASIC1.38□□□□□ -2.19
HDHD3Q9BSH5 MIR521-1-201ENST00000384902 87 ntBASIC1.38□□□□□ -2.19
HDHD3Q9BSH5 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
HDHD3Q9BSH5 RNA5SP501-201ENST00000410990 112 ntBASIC1.38□□□□□ -2.19
HDHD3Q9BSH5 RN7SKP192-201ENST00000411291 327 ntBASIC1.38□□□□□ -2.19
HDHD3Q9BSH5 EIF4EP2-201ENST00000422816 654 ntBASIC1.38□□□□□ -2.19
HDHD3Q9BSH5 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.38□□□□□ -2.19
HDHD3Q9BSH5 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.38□□□□□ -2.19
HDHD3Q9BSH5 DAP3P1-201ENST00000441522 278 ntBASIC1.38□□□□□ -2.19
HDHD3Q9BSH5 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.38□□□□□ -2.19
HDHD3Q9BSH5 AC245102.2-201ENST00000448956 180 ntBASIC1.38□□□□□ -2.19
HDHD3Q9BSH5 OR2AQ1P-201ENST00000451972 200 ntBASIC1.38□□□□□ -2.19
HDHD3Q9BSH5 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.38□□□□□ -2.19
HDHD3Q9BSH5 RNU6-329P-201ENST00000459618 107 ntBASIC1.38□□□□□ -2.19
HDHD3Q9BSH5 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.38□□□□□ -2.19
HDHD3Q9BSH5 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.38□□□□□ -2.19
HDHD3Q9BSH5 AF235103.2-201ENST00000525753 346 ntBASIC1.38□□□□□ -2.19
HDHD3Q9BSH5 AC025754.2-201ENST00000606491 432 ntBASIC1.38□□□□□ -2.19
HDHD3Q9BSH5 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.38□□□□□ -2.19
HDHD3Q9BSH5 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.38□□□□□ -2.19
HDHD3Q9BSH5 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.38□□□□□ -2.19
HDHD3Q9BSH5 SCARNA4-201ENST00000629045 128 ntBASIC1.38□□□□□ -2.19
HDHD3Q9BSH5 AL133216.2-202ENST00000634512 349 ntBASIC1.38□□□□□ -2.19
HDHD3Q9BSH5 AC092881.1-201ENST00000638218 2733 ntBASIC1.38□□□□□ -2.19
HDHD3Q9BSH5 MTND5P9-201ENST00000503854 1755 ntBASIC1.37□□□□□ -2.19
HDHD3Q9BSH5 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
HDHD3Q9BSH5 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
HDHD3Q9BSH5 RNU6-596P-201ENST00000365395 98 ntBASIC1.37□□□□□ -2.19
HDHD3Q9BSH5 SNORA18.2-201ENST00000383865 132 ntBASIC1.37□□□□□ -2.19
HDHD3Q9BSH5 SNORA67.2-201ENST00000384300 149 ntBASIC1.37□□□□□ -2.19
HDHD3Q9BSH5 RNU6-160P-201ENST00000384591 107 ntBASIC1.37□□□□□ -2.19
HDHD3Q9BSH5 MIR583-201ENST00000384846 75 ntBASIC1.37□□□□□ -2.19
HDHD3Q9BSH5 MIR517A-201ENST00000385001 87 ntBASIC1.37□□□□□ -2.19
HDHD3Q9BSH5 MIR634-201ENST00000385208 97 ntBASIC1.37□□□□□ -2.19
HDHD3Q9BSH5 SNORA48.1-201ENST00000390879 135 ntBASIC1.37□□□□□ -2.19
HDHD3Q9BSH5 RNU11-3P-201ENST00000391111 133 ntBASIC1.37□□□□□ -2.19
HDHD3Q9BSH5 RNU6-1093P-201ENST00000391194 107 ntBASIC1.37□□□□□ -2.19
HDHD3Q9BSH5 RNA5SP494-201ENST00000410653 129 ntBASIC1.37□□□□□ -2.19
HDHD3Q9BSH5 RN7SKP101-201ENST00000411376 320 ntBASIC1.37□□□□□ -2.19
HDHD3Q9BSH5 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.37□□□□□ -2.19
HDHD3Q9BSH5 AC009310.1-201ENST00000414414 451 ntBASIC1.37□□□□□ -2.19
HDHD3Q9BSH5 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.37□□□□□ -2.19
HDHD3Q9BSH5 Z82188.1-201ENST00000436709 154 ntBASIC1.37□□□□□ -2.19
HDHD3Q9BSH5 SNRPEP8-201ENST00000442866 260 ntBASIC1.37□□□□□ -2.19
HDHD3Q9BSH5 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.37□□□□□ -2.19
HDHD3Q9BSH5 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
HDHD3Q9BSH5 PCMTD1P1-201ENST00000455560 355 ntBASIC1.37□□□□□ -2.19
HDHD3Q9BSH5 AC010531.2-201ENST00000465012 153 ntBASIC1.37□□□□□ -2.19
HDHD3Q9BSH5 AC087477.1-201ENST00000465747 340 ntBASIC1.37□□□□□ -2.19
HDHD3Q9BSH5 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.37□□□□□ -2.19
HDHD3Q9BSH5 RNA5SP182-201ENST00000516064 82 ntBASIC1.37□□□□□ -2.19
HDHD3Q9BSH5 RNU6-358P-201ENST00000516564 75 ntBASIC1.37□□□□□ -2.19
HDHD3Q9BSH5 RNU6-566P-201ENST00000516790 107 ntBASIC1.37□□□□□ -2.19
HDHD3Q9BSH5 RNA5SP454-201ENST00000517231 127 ntBASIC1.37□□□□□ -2.19
HDHD3Q9BSH5 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.37□□□□□ -2.19
HDHD3Q9BSH5 AC090517.1-201ENST00000569307 266 ntBASIC1.37□□□□□ -2.19
HDHD3Q9BSH5 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.37□□□□□ -2.19
HDHD3Q9BSH5 AC060780.3-201ENST00000589464 80 ntBASIC1.37□□□□□ -2.19
HDHD3Q9BSH5 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.37□□□□□ -2.19
HDHD3Q9BSH5 AC010900.2-201ENST00000604508 210 ntBASIC1.37□□□□□ -2.19
HDHD3Q9BSH5 RMST_6.1-201ENST00000611980 203 ntBASIC1.37□□□□□ -2.19
HDHD3Q9BSH5 SNORD115-8-201ENST00000363856 82 ntBASIC1.36□□□□□ -2.19
HDHD3Q9BSH5 SNORD115-38-201ENST00000365037 82 ntBASIC1.36□□□□□ -2.19
HDHD3Q9BSH5 MIR549A-201ENST00000385268 96 ntBASIC1.36□□□□□ -2.19
HDHD3Q9BSH5 RNU6-174P-201ENST00000410406 106 ntBASIC1.36□□□□□ -2.19
HDHD3Q9BSH5 MTCO3P46-201ENST00000425787 232 ntBASIC1.36□□□□□ -2.19
HDHD3Q9BSH5 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.36□□□□□ -2.19
HDHD3Q9BSH5 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.36□□□□□ -2.19
HDHD3Q9BSH5 RNU4-49P-201ENST00000516080 140 ntBASIC1.36□□□□□ -2.19
HDHD3Q9BSH5 RNVU1-2-201ENST00000516326 135 ntBASIC1.36□□□□□ -2.19
HDHD3Q9BSH5 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.36□□□□□ -2.19
HDHD3Q9BSH5 AC084782.3-201ENST00000612282 578 ntBASIC1.36□□□□□ -2.19
HDHD3Q9BSH5 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.36□□□□□ -2.19
HDHD3Q9BSH5 AC009248.2-201ENST00000619826 254 ntBASIC1.36□□□□□ -2.19
HDHD3Q9BSH5 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.36□□□□□ -2.19
HDHD3Q9BSH5 AC233981.2-201ENST00000611524 1614 ntBASIC1.36□□□□□ -2.19
HDHD3Q9BSH5 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.36□□□□□ -2.19
HDHD3Q9BSH5 BX322639.1-202ENST00000423987 2213 ntBASIC1.35□□□□□ -2.19
HDHD3Q9BSH5 Y_RNA.86-201ENST00000363020 111 ntBASIC1.35□□□□□ -2.19
HDHD3Q9BSH5 SNORD115-32-201ENST00000364079 82 ntBASIC1.35□□□□□ -2.19
HDHD3Q9BSH5 Y_RNA.339-201ENST00000365325 102 ntBASIC1.35□□□□□ -2.19
HDHD3Q9BSH5 RNU6-842P-201ENST00000384269 107 ntBASIC1.35□□□□□ -2.19
HDHD3Q9BSH5 RNA5SP504-201ENST00000410676 117 ntBASIC1.35□□□□□ -2.19
HDHD3Q9BSH5 RNA5SP100-201ENST00000410903 110 ntBASIC1.35□□□□□ -2.19
HDHD3Q9BSH5 RNA5SP59-201ENST00000410922 110 ntBASIC1.35□□□□□ -2.19
HDHD3Q9BSH5 RPS20P15-201ENST00000412792 311 ntBASIC1.35□□□□□ -2.19
HDHD3Q9BSH5 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 168.8 ms