Protein–RNA interactions for Protein: Q9BRR0

ZKSCAN3, Zinc finger protein with KRAB and SCAN domains 3, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3Q9BRR0 RNU6-1027P-201ENST00000383998 107 ntBASIC3.93□□□□□ -1.78
ZKSCAN3Q9BRR0 Y_RNA.568-201ENST00000384742 113 ntBASIC3.93□□□□□ -1.78
ZKSCAN3Q9BRR0 MIR34B-201ENST00000385076 84 ntBASIC3.93□□□□□ -1.78
ZKSCAN3Q9BRR0 RNU6-763P-201ENST00000390865 106 ntBASIC3.93□□□□□ -1.78
ZKSCAN3Q9BRR0 RN7SKP111-201ENST00000410349 271 ntBASIC3.93□□□□□ -1.78
ZKSCAN3Q9BRR0 AL714022.1-201ENST00000439897 151 ntBASIC3.93□□□□□ -1.78
ZKSCAN3Q9BRR0 RPS20P10-201ENST00000451209 253 ntBASIC3.93□□□□□ -1.78
ZKSCAN3Q9BRR0 AP002884.2-201ENST00000471647 395 ntBASIC3.93□□□□□ -1.78
ZKSCAN3Q9BRR0 RPL31P41-201ENST00000477967 372 ntBASIC3.93□□□□□ -1.78
ZKSCAN3Q9BRR0 RNU6-62P-201ENST00000516526 102 ntBASIC3.93□□□□□ -1.78
ZKSCAN3Q9BRR0 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC3.93□□□□□ -1.78
ZKSCAN3Q9BRR0 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.93□□□□□ -1.78
ZKSCAN3Q9BRR0 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.93□□□□□ -1.78
ZKSCAN3Q9BRR0 MIR3944-201ENST00000581277 108 ntBASIC3.93□□□□□ -1.78
ZKSCAN3Q9BRR0 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.93□□□□□ -1.78
ZKSCAN3Q9BRR0 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.93□□□□□ -1.78
ZKSCAN3Q9BRR0 TCL6_2.1-201ENST00000615162 119 ntBASIC3.93□□□□□ -1.78
ZKSCAN3Q9BRR0 AC091895.1-201ENST00000624494 256 ntBASIC3.93□□□□□ -1.78
ZKSCAN3Q9BRR0 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
ZKSCAN3Q9BRR0 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
ZKSCAN3Q9BRR0 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.92□□□□□ -1.78
ZKSCAN3Q9BRR0 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
ZKSCAN3Q9BRR0 Y_RNA.40-201ENST00000362645 93 ntBASIC3.92□□□□□ -1.78
ZKSCAN3Q9BRR0 U3.9-201ENST00000363823 204 ntBASIC3.92□□□□□ -1.78
ZKSCAN3Q9BRR0 RNU6-454P-201ENST00000364292 107 ntBASIC3.92□□□□□ -1.78
ZKSCAN3Q9BRR0 RNA5SP72-201ENST00000364442 117 ntBASIC3.92□□□□□ -1.78
ZKSCAN3Q9BRR0 RNU6-959P-201ENST00000384671 107 ntBASIC3.92□□□□□ -1.78
ZKSCAN3Q9BRR0 MIR147B-201ENST00000390185 80 ntBASIC3.92□□□□□ -1.78
ZKSCAN3Q9BRR0 AL357075.1-201ENST00000404107 726 ntBASIC3.92□□□□□ -1.78
ZKSCAN3Q9BRR0 Z98941.1-201ENST00000407764 100 ntBASIC3.92□□□□□ -1.78
ZKSCAN3Q9BRR0 AC005326.1-201ENST00000429197 123 ntBASIC3.92□□□□□ -1.78
ZKSCAN3Q9BRR0 AL162725.1-201ENST00000435405 301 ntBASIC3.92□□□□□ -1.78
ZKSCAN3Q9BRR0 SEPT7P4-201ENST00000437076 306 ntBASIC3.92□□□□□ -1.78
ZKSCAN3Q9BRR0 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.92□□□□□ -1.78
ZKSCAN3Q9BRR0 RNU7-23P-201ENST00000459465 62 ntBASIC3.92□□□□□ -1.78
ZKSCAN3Q9BRR0 NDUFB9P3-201ENST00000521269 501 ntBASIC3.92□□□□□ -1.78
ZKSCAN3Q9BRR0 MIR4644-201ENST00000579929 84 ntBASIC3.92□□□□□ -1.78
ZKSCAN3Q9BRR0 AC007179.3-201ENST00000604976 235 ntBASIC3.92□□□□□ -1.78
ZKSCAN3Q9BRR0 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.92□□□□□ -1.78
ZKSCAN3Q9BRR0 AC018692.3-201ENST00000623929 123 ntBASIC3.92□□□□□ -1.78
ZKSCAN3Q9BRR0 AC068205.3-201ENST00000636385 468 ntBASIC3.92□□□□□ -1.78
ZKSCAN3Q9BRR0 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
ZKSCAN3Q9BRR0 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
ZKSCAN3Q9BRR0 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
ZKSCAN3Q9BRR0 AC002546.1-201ENST00000588041 2504 ntBASIC3.91□□□□□ -1.78
ZKSCAN3Q9BRR0 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
ZKSCAN3Q9BRR0 RNU6-22P-201ENST00000384355 107 ntBASIC3.91□□□□□ -1.78
ZKSCAN3Q9BRR0 RNU6-417P-201ENST00000384712 107 ntBASIC3.91□□□□□ -1.78
ZKSCAN3Q9BRR0 RNU6-131P-201ENST00000391144 107 ntBASIC3.91□□□□□ -1.78
ZKSCAN3Q9BRR0 RNU2-49P-201ENST00000410666 184 ntBASIC3.91□□□□□ -1.78
ZKSCAN3Q9BRR0 AIMP1P2-201ENST00000425294 312 ntBASIC3.91□□□□□ -1.78
ZKSCAN3Q9BRR0 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.91□□□□□ -1.78
ZKSCAN3Q9BRR0 AC027124.2-201ENST00000428249 105 ntBASIC3.91□□□□□ -1.78
ZKSCAN3Q9BRR0 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC3.91□□□□□ -1.78
ZKSCAN3Q9BRR0 HMGN2P7-201ENST00000456186 273 ntBASIC3.91□□□□□ -1.78
ZKSCAN3Q9BRR0 BX510359.1-201ENST00000456973 237 ntBASIC3.91□□□□□ -1.78
ZKSCAN3Q9BRR0 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.91□□□□□ -1.78
ZKSCAN3Q9BRR0 RNU6-479P-201ENST00000516348 105 ntBASIC3.91□□□□□ -1.78
ZKSCAN3Q9BRR0 AC107934.2-201ENST00000518653 310 ntBASIC3.91□□□□□ -1.78
ZKSCAN3Q9BRR0 AC136628.3-201ENST00000521868 290 ntBASIC3.91□□□□□ -1.78
ZKSCAN3Q9BRR0 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.91□□□□□ -1.78
ZKSCAN3Q9BRR0 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
ZKSCAN3Q9BRR0 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
ZKSCAN3Q9BRR0 AC007496.3-201ENST00000624987 3443 ntBASIC3.91□□□□□ -1.78
ZKSCAN3Q9BRR0 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
ZKSCAN3Q9BRR0 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.9□□□□□ -1.78
ZKSCAN3Q9BRR0 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.9□□□□□ -1.78
ZKSCAN3Q9BRR0 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
ZKSCAN3Q9BRR0 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
ZKSCAN3Q9BRR0 Y_RNA.215-201ENST00000364204 112 ntBASIC3.9□□□□□ -1.79
ZKSCAN3Q9BRR0 RNU6-275P-201ENST00000364910 107 ntBASIC3.9□□□□□ -1.79
ZKSCAN3Q9BRR0 RNU6-710P-201ENST00000410424 105 ntBASIC3.9□□□□□ -1.79
ZKSCAN3Q9BRR0 RNU2-37P-201ENST00000410695 177 ntBASIC3.9□□□□□ -1.79
ZKSCAN3Q9BRR0 RNA5SP120-201ENST00000410900 112 ntBASIC3.9□□□□□ -1.79
ZKSCAN3Q9BRR0 TOMM22P2-201ENST00000430735 237 ntBASIC3.9□□□□□ -1.79
ZKSCAN3Q9BRR0 AC004386.2-201ENST00000441858 148 ntBASIC3.9□□□□□ -1.79
ZKSCAN3Q9BRR0 Z75741.1-201ENST00000446793 314 ntBASIC3.9□□□□□ -1.79
ZKSCAN3Q9BRR0 U8.19-201ENST00000459095 133 ntBASIC3.9□□□□□ -1.79
ZKSCAN3Q9BRR0 snoU13.22-201ENST00000459428 104 ntBASIC3.9□□□□□ -1.79
ZKSCAN3Q9BRR0 RPL23AP70-201ENST00000483361 460 ntBASIC3.9□□□□□ -1.79
ZKSCAN3Q9BRR0 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.9□□□□□ -1.79
ZKSCAN3Q9BRR0 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.9□□□□□ -1.79
ZKSCAN3Q9BRR0 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.9□□□□□ -1.79
ZKSCAN3Q9BRR0 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.9□□□□□ -1.79
ZKSCAN3Q9BRR0 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
ZKSCAN3Q9BRR0 AC010889.1-201ENST00000566193 2666 ntBASIC3.9□□□□□ -1.79
ZKSCAN3Q9BRR0 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
ZKSCAN3Q9BRR0 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
ZKSCAN3Q9BRR0 MIR423-201ENST00000362201 94 ntBASIC3.89□□□□□ -1.79
ZKSCAN3Q9BRR0 RNU4-15P-201ENST00000362613 141 ntBASIC3.89□□□□□ -1.79
ZKSCAN3Q9BRR0 SNORD115-30-201ENST00000364117 82 ntBASIC3.89□□□□□ -1.79
ZKSCAN3Q9BRR0 RNU6-198P-201ENST00000384258 104 ntBASIC3.89□□□□□ -1.79
ZKSCAN3Q9BRR0 RNU6-381P-201ENST00000391259 108 ntBASIC3.89□□□□□ -1.79
ZKSCAN3Q9BRR0 AL031003.1-201ENST00000404229 172 ntBASIC3.89□□□□□ -1.79
ZKSCAN3Q9BRR0 AC004866.1-201ENST00000411748 78 ntBASIC3.89□□□□□ -1.79
ZKSCAN3Q9BRR0 AC010099.1-201ENST00000455434 375 ntBASIC3.89□□□□□ -1.79
ZKSCAN3Q9BRR0 AC091179.1-201ENST00000461606 579 ntBASIC3.89□□□□□ -1.79
ZKSCAN3Q9BRR0 CENPBD1P1-201ENST00000464061 469 ntBASIC3.89□□□□□ -1.79
ZKSCAN3Q9BRR0 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
ZKSCAN3Q9BRR0 Y_RNA.797-201ENST00000515977 94 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms