Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 AC090617.3-201ENST00000573670 475 ntBASIC2.64□□□□□ -1.99
PAAF1Q9BRP4 AC023043.3-201ENST00000593113 385 ntBASIC2.64□□□□□ -1.99
PAAF1Q9BRP4 AC046143.2-201ENST00000609789 160 ntBASIC2.64□□□□□ -1.99
PAAF1Q9BRP4 AC005520.5-201ENST00000613926 164 ntBASIC2.64□□□□□ -1.99
PAAF1Q9BRP4 U2.1-201ENST00000618978 145 ntBASIC2.64□□□□□ -1.99
PAAF1Q9BRP4 AC099654.10-201ENST00000640395 161 ntBASIC2.64□□□□□ -1.99
PAAF1Q9BRP4 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
PAAF1Q9BRP4 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
PAAF1Q9BRP4 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
PAAF1Q9BRP4 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.63□□□□□ -1.99
PAAF1Q9BRP4 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.63□□□□□ -1.99
PAAF1Q9BRP4 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
PAAF1Q9BRP4 RNU1-72P-201ENST00000362976 153 ntBASIC2.63□□□□□ -1.99
PAAF1Q9BRP4 Y_RNA.148-201ENST00000363557 117 ntBASIC2.63□□□□□ -1.99
PAAF1Q9BRP4 RNA5SP456-201ENST00000364002 114 ntBASIC2.63□□□□□ -1.99
PAAF1Q9BRP4 SNORD56.5-201ENST00000364281 72 ntBASIC2.63□□□□□ -1.99
PAAF1Q9BRP4 RNU6-879P-201ENST00000364328 108 ntBASIC2.63□□□□□ -1.99
PAAF1Q9BRP4 Y_RNA.326-201ENST00000365176 113 ntBASIC2.63□□□□□ -1.99
PAAF1Q9BRP4 AC117470.1-201ENST00000381974 330 ntBASIC2.63□□□□□ -1.99
PAAF1Q9BRP4 Y_RNA.424-201ENST00000384063 103 ntBASIC2.63□□□□□ -1.99
PAAF1Q9BRP4 MIR549A-201ENST00000385268 96 ntBASIC2.63□□□□□ -1.99
PAAF1Q9BRP4 Y_RNA.592-201ENST00000410274 109 ntBASIC2.63□□□□□ -1.99
PAAF1Q9BRP4 AC092427.1-202ENST00000430569 476 ntBASIC2.63□□□□□ -1.99
PAAF1Q9BRP4 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.63□□□□□ -1.99
PAAF1Q9BRP4 RNA5SP385-201ENST00000515947 110 ntBASIC2.63□□□□□ -1.99
PAAF1Q9BRP4 AC022868.1-201ENST00000517767 391 ntBASIC2.63□□□□□ -1.99
PAAF1Q9BRP4 GNAI2P1-201ENST00000541815 315 ntBASIC2.63□□□□□ -1.99
PAAF1Q9BRP4 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.63□□□□□ -1.99
PAAF1Q9BRP4 MIR5695-201ENST00000579717 85 ntBASIC2.63□□□□□ -1.99
PAAF1Q9BRP4 AC090616.3-201ENST00000582184 217 ntBASIC2.63□□□□□ -1.99
PAAF1Q9BRP4 AC006504.6-201ENST00000590142 199 ntBASIC2.63□□□□□ -1.99
PAAF1Q9BRP4 VN1R91P-201ENST00000594377 169 ntBASIC2.63□□□□□ -1.99
PAAF1Q9BRP4 SNRPGP20-201ENST00000604477 205 ntBASIC2.63□□□□□ -1.99
PAAF1Q9BRP4 AL355297.2-201ENST00000604792 129 ntBASIC2.63□□□□□ -1.99
PAAF1Q9BRP4 AC005296.1-201ENST00000616145 209 ntBASIC2.63□□□□□ -1.99
PAAF1Q9BRP4 AL449363.1-201ENST00000617815 186 ntBASIC2.63□□□□□ -1.99
PAAF1Q9BRP4 AC091925.1-201ENST00000623204 462 ntBASIC2.63□□□□□ -1.99
PAAF1Q9BRP4 AL606534.2-204ENST00000635008 178 ntBASIC2.63□□□□□ -1.99
PAAF1Q9BRP4 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.63□□□□□ -1.99
PAAF1Q9BRP4 MTND4P1-201ENST00000457501 1466 ntBASIC2.63□□□□□ -1.99
PAAF1Q9BRP4 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.62□□□□□ -1.99
PAAF1Q9BRP4 AC005592.1-201ENST00000566527 1640 ntBASIC2.62□□□□□ -1.99
PAAF1Q9BRP4 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
PAAF1Q9BRP4 Y_RNA.80-201ENST00000362996 102 ntBASIC2.62□□□□□ -1.99
PAAF1Q9BRP4 RNU6-137P-201ENST00000363680 108 ntBASIC2.62□□□□□ -1.99
PAAF1Q9BRP4 RNU6-280P-201ENST00000364145 104 ntBASIC2.62□□□□□ -1.99
PAAF1Q9BRP4 SNORA33.2-201ENST00000365413 134 ntBASIC2.62□□□□□ -1.99
PAAF1Q9BRP4 Y_RNA.422-201ENST00000384054 114 ntBASIC2.62□□□□□ -1.99
PAAF1Q9BRP4 RNU6-639P-201ENST00000384074 107 ntBASIC2.62□□□□□ -1.99
PAAF1Q9BRP4 Y_RNA.485-201ENST00000384395 102 ntBASIC2.62□□□□□ -1.99
PAAF1Q9BRP4 RNU6-1274P-201ENST00000384557 107 ntBASIC2.62□□□□□ -1.99
PAAF1Q9BRP4 Y_RNA.557-201ENST00000384680 107 ntBASIC2.62□□□□□ -1.99
PAAF1Q9BRP4 MRPL42P3-201ENST00000401492 326 ntBASIC2.62□□□□□ -1.99
PAAF1Q9BRP4 RNU4-53P-201ENST00000410828 140 ntBASIC2.62□□□□□ -1.99
PAAF1Q9BRP4 Z98742.3-201ENST00000418637 326 ntBASIC2.62□□□□□ -1.99
PAAF1Q9BRP4 AC027124.2-201ENST00000428249 105 ntBASIC2.62□□□□□ -1.99
PAAF1Q9BRP4 AC234781.5-201ENST00000508429 271 ntBASIC2.62□□□□□ -1.99
PAAF1Q9BRP4 RNU6-1114P-201ENST00000516022 107 ntBASIC2.62□□□□□ -1.99
PAAF1Q9BRP4 RNU4-77P-201ENST00000516692 156 ntBASIC2.62□□□□□ -1.99
PAAF1Q9BRP4 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.62□□□□□ -1.99
PAAF1Q9BRP4 AC027288.2-201ENST00000553028 243 ntBASIC2.62□□□□□ -1.99
PAAF1Q9BRP4 MIR4506-201ENST00000584693 77 ntBASIC2.62□□□□□ -1.99
PAAF1Q9BRP4 AC016727.2-201ENST00000603988 621 ntBASIC2.62□□□□□ -1.99
PAAF1Q9BRP4 MIR4272-201ENST00000635924 64 ntBASIC2.62□□□□□ -1.99
PAAF1Q9BRP4 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.62□□□□□ -1.99
PAAF1Q9BRP4 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
PAAF1Q9BRP4 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
PAAF1Q9BRP4 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.62□□□□□ -1.99
PAAF1Q9BRP4 ZNF658B-202ENST00000615961 3375 ntBASIC2.61□□□□□ -1.99
PAAF1Q9BRP4 RNU5F-3P-201ENST00000363767 117 ntBASIC2.61□□□□□ -1.99
PAAF1Q9BRP4 SNORA70B-201ENST00000384210 135 ntBASIC2.61□□□□□ -1.99
PAAF1Q9BRP4 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
PAAF1Q9BRP4 MIR1294-201ENST00000408503 142 ntBASIC2.61□□□□□ -1.99
PAAF1Q9BRP4 SNORD88.1-201ENST00000408684 91 ntBASIC2.61□□□□□ -1.99
PAAF1Q9BRP4 MTCO3P19-201ENST00000415864 321 ntBASIC2.61□□□□□ -1.99
PAAF1Q9BRP4 SNORA25.14-201ENST00000516481 132 ntBASIC2.61□□□□□ -1.99
PAAF1Q9BRP4 MIR2355-201ENST00000517199 87 ntBASIC2.61□□□□□ -1.99
PAAF1Q9BRP4 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
PAAF1Q9BRP4 ANP32BP3-201ENST00000559213 706 ntBASIC2.61□□□□□ -1.99
PAAF1Q9BRP4 UBL5P4-201ENST00000562584 236 ntBASIC2.61□□□□□ -1.99
PAAF1Q9BRP4 MIR3124-201ENST00000582636 67 ntBASIC2.61□□□□□ -1.99
PAAF1Q9BRP4 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.61□□□□□ -1.99
PAAF1Q9BRP4 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
PAAF1Q9BRP4 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
PAAF1Q9BRP4 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
PAAF1Q9BRP4 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
PAAF1Q9BRP4 RNU6-159P-201ENST00000391080 106 ntBASIC2.6□□□□□ -1.99
PAAF1Q9BRP4 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.6□□□□□ -1.99
PAAF1Q9BRP4 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.6□□□□□ -1.99
PAAF1Q9BRP4 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.6□□□□□ -1.99
PAAF1Q9BRP4 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.6□□□□□ -1.99
PAAF1Q9BRP4 AC007215.1-201ENST00000464893 276 ntBASIC2.6□□□□□ -1.99
PAAF1Q9BRP4 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.6□□□□□ -1.99
PAAF1Q9BRP4 RPS29P30-201ENST00000600975 111 ntBASIC2.6□□□□□ -1.99
PAAF1Q9BRP4 AL356575.1-201ENST00000603008 283 ntBASIC2.6□□□□□ -1.99
PAAF1Q9BRP4 AC103810.6-201ENST00000606708 136 ntBASIC2.6□□□□□ -1.99
PAAF1Q9BRP4 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.6□□□□□ -1.99
PAAF1Q9BRP4 AC091812.1-201ENST00000432235 1948 ntBASIC2.6□□□□□ -1.99
PAAF1Q9BRP4 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
PAAF1Q9BRP4 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms