Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 RNU6-161P-201ENST00000363051 106 ntBASIC-0.54□□□□□ -2.5
COL12A1Q99715 MIR204-201ENST00000385200 110 ntBASIC-0.54□□□□□ -2.5
COL12A1Q99715 U8.15-201ENST00000390947 134 ntBASIC-0.54□□□□□ -2.5
COL12A1Q99715 MIR873-201ENST00000401120 77 ntBASIC-0.54□□□□□ -2.5
COL12A1Q99715 COX6CP10-201ENST00000416832 224 ntBASIC-0.54□□□□□ -2.5
COL12A1Q99715 AC016831.2-201ENST00000417179 352 ntBASIC-0.54□□□□□ -2.5
COL12A1Q99715 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC-0.54□□□□□ -2.5
COL12A1Q99715 YWHAZP8-201ENST00000436935 731 ntBASIC-0.54□□□□□ -2.5
COL12A1Q99715 AL353813.1-201ENST00000440700 253 ntBASIC-0.54□□□□□ -2.5
COL12A1Q99715 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.54□□□□□ -2.5
COL12A1Q99715 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC-0.54□□□□□ -2.5
COL12A1Q99715 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-0.54□□□□□ -2.5
COL12A1Q99715 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC-0.54□□□□□ -2.5
COL12A1Q99715 AL357078.3-201ENST00000607528 618 ntBASIC-0.54□□□□□ -2.5
COL12A1Q99715 AC005562.2-201ENST00000618264 111 ntBASIC-0.54□□□□□ -2.5
COL12A1Q99715 AL596211.1-201ENST00000569873 2277 ntBASIC-0.54□□□□□ -2.5
COL12A1Q99715 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC-0.55□□□□□ -2.5
COL12A1Q99715 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC-0.55□□□□□ -2.5
COL12A1Q99715 Y_RNA.133-201ENST00000363428 110 ntBASIC-0.55□□□□□ -2.5
COL12A1Q99715 Y_RNA.364-201ENST00000365532 101 ntBASIC-0.55□□□□□ -2.5
COL12A1Q99715 RNU6-1127P-201ENST00000384580 107 ntBASIC-0.55□□□□□ -2.5
COL12A1Q99715 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.55□□□□□ -2.5
COL12A1Q99715 MIR888-201ENST00000401186 77 ntBASIC-0.55□□□□□ -2.5
COL12A1Q99715 RNA5SP504-201ENST00000410676 117 ntBASIC-0.55□□□□□ -2.5
COL12A1Q99715 AC123900.1-201ENST00000420390 96 ntBASIC-0.55□□□□□ -2.5
COL12A1Q99715 AF235103.2-201ENST00000525753 346 ntBASIC-0.55□□□□□ -2.5
COL12A1Q99715 DEFB108D-201ENST00000527787 222 ntBASIC-0.55□□□□□ -2.5
COL12A1Q99715 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC-0.55□□□□□ -2.5
COL12A1Q99715 AL136317.1-201ENST00000612653 226 ntBASIC-0.55□□□□□ -2.5
COL12A1Q99715 PCGEM1.1-201ENST00000613431 131 ntBASIC-0.55□□□□□ -2.5
COL12A1Q99715 uc_338.16-201ENST00000621804 95 ntBASIC-0.55□□□□□ -2.5
COL12A1Q99715 MTND4P5-201ENST00000435821 1374 ntBASIC-0.55□□□□□ -2.5
COL12A1Q99715 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC-0.55□□□□□ -2.5
COL12A1Q99715 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC-0.55□□□□□ -2.5
COL12A1Q99715 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC-0.55□□□□□ -2.5
COL12A1Q99715 RBBP4P6-201ENST00000508098 202 ntBASIC-0.55□□□□□ -2.5
COL12A1Q99715 RNU6-1110P-201ENST00000516462 101 ntBASIC-0.55□□□□□ -2.5
COL12A1Q99715 MIR4520-1-201ENST00000582609 70 ntBASIC-0.55□□□□□ -2.5
COL12A1Q99715 AC104985.3-201ENST00000623479 597 ntBASIC-0.55□□□□□ -2.5
COL12A1Q99715 AC005592.1-201ENST00000566527 1640 ntBASIC-0.55□□□□□ -2.5
COL12A1Q99715 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.56□□□□□ -2.5
COL12A1Q99715 RNY3P11-201ENST00000364153 102 ntBASIC-0.56□□□□□ -2.5
COL12A1Q99715 RNU6-811P-201ENST00000384069 107 ntBASIC-0.56□□□□□ -2.5
COL12A1Q99715 SNORD65-201ENST00000391079 73 ntBASIC-0.56□□□□□ -2.5
COL12A1Q99715 AL356583.2-201ENST00000426536 280 ntBASIC-0.56□□□□□ -2.5
COL12A1Q99715 OFD1P7Y-201ENST00000454643 1155 ntBASIC-0.56□□□□□ -2.5
COL12A1Q99715 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-0.56□□□□□ -2.5
COL12A1Q99715 Y_RNA.715-201ENST00000517082 110 ntBASIC-0.56□□□□□ -2.5
COL12A1Q99715 RNA5SP66-201ENST00000517178 101 ntBASIC-0.56□□□□□ -2.5
COL12A1Q99715 AC025588.3-201ENST00000604182 274 ntBASIC-0.56□□□□□ -2.5
COL12A1Q99715 RMST_5.1-201ENST00000618704 126 ntBASIC-0.56□□□□□ -2.5
COL12A1Q99715 MIR563-201ENST00000385080 79 ntBASIC-0.56□□□□□ -2.5
COL12A1Q99715 RPS20P2-201ENST00000402520 389 ntBASIC-0.56□□□□□ -2.5
COL12A1Q99715 RNU4-49P-201ENST00000516080 140 ntBASIC-0.56□□□□□ -2.5
COL12A1Q99715 snoU83B.1-201ENST00000517136 88 ntBASIC-0.56□□□□□ -2.5
COL12A1Q99715 MTND4LP26-201ENST00000518144 282 ntBASIC-0.56□□□□□ -2.5
COL12A1Q99715 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC-0.56□□□□□ -2.5
COL12A1Q99715 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC-0.56□□□□□ -2.5
COL12A1Q99715 AC100830.2-201ENST00000581636 240 ntBASIC-0.56□□□□□ -2.5
COL12A1Q99715 RNU6-697P-201ENST00000363348 107 ntBASIC-0.56□□□□□ -2.5
COL12A1Q99715 RNA5SP517-201ENST00000364724 117 ntBASIC-0.56□□□□□ -2.5
COL12A1Q99715 MIR135A2-201ENST00000384854 100 ntBASIC-0.56□□□□□ -2.5
COL12A1Q99715 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC-0.56□□□□□ -2.5
COL12A1Q99715 AP002371.1-201ENST00000463604 433 ntBASIC-0.56□□□□□ -2.5
COL12A1Q99715 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC-0.56□□□□□ -2.5
COL12A1Q99715 RNU4ATAC10P-201ENST00000516967 122 ntBASIC-0.56□□□□□ -2.5
COL12A1Q99715 AP003072.1-201ENST00000531740 145 ntBASIC-0.56□□□□□ -2.5
COL12A1Q99715 AL022067.1-201ENST00000602426 454 ntBASIC-0.56□□□□□ -2.5
COL12A1Q99715 Y_RNA.234-201ENST00000364409 97 ntBASIC-0.57□□□□□ -2.5
COL12A1Q99715 RNU6-1019P-201ENST00000364424 107 ntBASIC-0.57□□□□□ -2.5
COL12A1Q99715 RNU4-28P-201ENST00000364739 141 ntBASIC-0.57□□□□□ -2.5
COL12A1Q99715 Y_RNA.396-201ENST00000383949 103 ntBASIC-0.57□□□□□ -2.5
COL12A1Q99715 RNU2-43P-201ENST00000410306 190 ntBASIC-0.57□□□□□ -2.5
COL12A1Q99715 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC-0.57□□□□□ -2.5
COL12A1Q99715 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC-0.57□□□□□ -2.5
COL12A1Q99715 SNORA18.4-201ENST00000516440 124 ntBASIC-0.57□□□□□ -2.5
COL12A1Q99715 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.57□□□□□ -2.5
COL12A1Q99715 AC068205.3-201ENST00000636385 468 ntBASIC-0.57□□□□□ -2.5
COL12A1Q99715 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.57□□□□□ -2.5
COL12A1Q99715 RNU6-730P-201ENST00000383954 104 ntBASIC-0.57□□□□□ -2.5
COL12A1Q99715 RNU6-432P-201ENST00000384196 109 ntBASIC-0.57□□□□□ -2.5
COL12A1Q99715 SNORA8.2-201ENST00000384372 139 ntBASIC-0.57□□□□□ -2.5
COL12A1Q99715 MIR548H1-201ENST00000408610 102 ntBASIC-0.57□□□□□ -2.5
COL12A1Q99715 RPL26P6-201ENST00000440913 438 ntBASIC-0.57□□□□□ -2.5
COL12A1Q99715 AC079354.2-201ENST00000453523 154 ntBASIC-0.57□□□□□ -2.5
COL12A1Q99715 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC-0.57□□□□□ -2.5
COL12A1Q99715 RNA5SP169-201ENST00000517268 117 ntBASIC-0.57□□□□□ -2.5
COL12A1Q99715 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC-0.57□□□□□ -2.5
COL12A1Q99715 AC090186.1-201ENST00000605991 572 ntBASIC-0.57□□□□□ -2.5
COL12A1Q99715 AC131235.4-201ENST00000609288 620 ntBASIC-0.57□□□□□ -2.5
COL12A1Q99715 SEPT14P17-201ENST00000617978 177 ntBASIC-0.57□□□□□ -2.5
COL12A1Q99715 AL663109.1-201ENST00000411498 844 ntBASIC-0.58□□□□□ -2.5
COL12A1Q99715 MTND4LP10-201ENST00000435146 291 ntBASIC-0.58□□□□□ -2.5
COL12A1Q99715 MTND2P4-201ENST00000445034 1004 ntBASIC-0.58□□□□□ -2.5
COL12A1Q99715 AC022364.2-201ENST00000457963 554 ntBASIC-0.58□□□□□ -2.5
COL12A1Q99715 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC-0.58□□□□□ -2.5
COL12A1Q99715 AC068790.2-201ENST00000602601 557 ntBASIC-0.58□□□□□ -2.5
COL12A1Q99715 AC104695.3-201ENST00000604052 296 ntBASIC-0.58□□□□□ -2.5
COL12A1Q99715 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC-0.58□□□□□ -2.5
COL12A1Q99715 ZNF204P-201ENST00000416749 2397 ntBASIC-0.58□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms