Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 MIR208B-201ENST00000401172 77 ntBASIC2.04□□□□□ -2.08
CDCA3Q99618 RNA5SP201-201ENST00000410316 124 ntBASIC2.04□□□□□ -2.08
CDCA3Q99618 RNA5SP494-201ENST00000410653 129 ntBASIC2.04□□□□□ -2.08
CDCA3Q99618 CBX3P6-201ENST00000430257 527 ntBASIC2.04□□□□□ -2.08
CDCA3Q99618 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.04□□□□□ -2.08
CDCA3Q99618 AC107399.1-201ENST00000451226 265 ntBASIC2.04□□□□□ -2.08
CDCA3Q99618 FO393415.2-201ENST00000480085 343 ntBASIC2.04□□□□□ -2.08
CDCA3Q99618 SNORA25.15-201ENST00000516487 89 ntBASIC2.04□□□□□ -2.08
CDCA3Q99618 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.04□□□□□ -2.08
CDCA3Q99618 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.04□□□□□ -2.08
CDCA3Q99618 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.04□□□□□ -2.08
CDCA3Q99618 MIR4273-201ENST00000582824 84 ntBASIC2.04□□□□□ -2.08
CDCA3Q99618 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CDCA3Q99618 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
CDCA3Q99618 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.03□□□□□ -2.08
CDCA3Q99618 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.03□□□□□ -2.08
CDCA3Q99618 RNU5B-2P-201ENST00000363036 113 ntBASIC2.03□□□□□ -2.08
CDCA3Q99618 SNORA72.1-201ENST00000363485 129 ntBASIC2.03□□□□□ -2.08
CDCA3Q99618 U3.9-201ENST00000363823 204 ntBASIC2.03□□□□□ -2.08
CDCA3Q99618 Y_RNA.339-201ENST00000365325 102 ntBASIC2.03□□□□□ -2.08
CDCA3Q99618 Y_RNA.473-201ENST00000384333 102 ntBASIC2.03□□□□□ -2.08
CDCA3Q99618 SNORA17.3-201ENST00000391159 129 ntBASIC2.03□□□□□ -2.08
CDCA3Q99618 RNU6-1093P-201ENST00000391194 107 ntBASIC2.03□□□□□ -2.08
CDCA3Q99618 MIR1287-201ENST00000408492 90 ntBASIC2.03□□□□□ -2.08
CDCA3Q99618 MIR1294-201ENST00000408503 142 ntBASIC2.03□□□□□ -2.08
CDCA3Q99618 RNU2-48P-201ENST00000410694 191 ntBASIC2.03□□□□□ -2.08
CDCA3Q99618 RPS27P21-201ENST00000486977 252 ntBASIC2.03□□□□□ -2.08
CDCA3Q99618 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.03□□□□□ -2.08
CDCA3Q99618 AC005741.1-201ENST00000511094 432 ntBASIC2.03□□□□□ -2.08
CDCA3Q99618 RNU6-667P-201ENST00000517186 102 ntBASIC2.03□□□□□ -2.08
CDCA3Q99618 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.03□□□□□ -2.08
CDCA3Q99618 AC118273.2-201ENST00000532092 465 ntBASIC2.03□□□□□ -2.08
CDCA3Q99618 AC022616.8-201ENST00000533569 253 ntBASIC2.03□□□□□ -2.08
CDCA3Q99618 AC016256.1-201ENST00000547971 354 ntBASIC2.03□□□□□ -2.08
CDCA3Q99618 MIR3126-201ENST00000577443 74 ntBASIC2.03□□□□□ -2.08
CDCA3Q99618 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.03□□□□□ -2.08
CDCA3Q99618 MIR5002-201ENST00000584713 97 ntBASIC2.03□□□□□ -2.08
CDCA3Q99618 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.03□□□□□ -2.08
CDCA3Q99618 SNORD14A-201ENST00000606526 91 ntBASIC2.03□□□□□ -2.08
CDCA3Q99618 AL355073.2-201ENST00000612106 557 ntBASIC2.03□□□□□ -2.08
CDCA3Q99618 AC022202.1-201ENST00000613515 211 ntBASIC2.03□□□□□ -2.08
CDCA3Q99618 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.08
CDCA3Q99618 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
CDCA3Q99618 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
CDCA3Q99618 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CDCA3Q99618 Y_RNA.166-201ENST00000363730 102 ntBASIC2.02□□□□□ -2.09
CDCA3Q99618 SNORD32B-201ENST00000364460 84 ntBASIC2.02□□□□□ -2.09
CDCA3Q99618 Y_RNA.303-201ENST00000364998 94 ntBASIC2.02□□□□□ -2.09
CDCA3Q99618 RNU4-52P-201ENST00000384209 138 ntBASIC2.02□□□□□ -2.09
CDCA3Q99618 RPL37P10-201ENST00000412884 288 ntBASIC2.02□□□□□ -2.09
CDCA3Q99618 AC079354.2-201ENST00000453523 154 ntBASIC2.02□□□□□ -2.09
CDCA3Q99618 RPL23AP75-201ENST00000491601 451 ntBASIC2.02□□□□□ -2.09
CDCA3Q99618 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.02□□□□□ -2.09
CDCA3Q99618 AC107393.1-201ENST00000512403 346 ntBASIC2.02□□□□□ -2.09
CDCA3Q99618 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.02□□□□□ -2.09
CDCA3Q99618 AC018630.3-201ENST00000542637 96 ntBASIC2.02□□□□□ -2.09
CDCA3Q99618 EIF4A1P12-201ENST00000551910 141 ntBASIC2.02□□□□□ -2.09
CDCA3Q99618 AL121579.1-201ENST00000555129 305 ntBASIC2.02□□□□□ -2.09
CDCA3Q99618 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.02□□□□□ -2.09
CDCA3Q99618 MIR5089-201ENST00000580047 84 ntBASIC2.02□□□□□ -2.09
CDCA3Q99618 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.02□□□□□ -2.09
CDCA3Q99618 AC243960.4-201ENST00000600532 288 ntBASIC2.02□□□□□ -2.09
CDCA3Q99618 uc_338.5-201ENST00000611839 155 ntBASIC2.02□□□□□ -2.09
CDCA3Q99618 AL132822.1-201ENST00000617063 513 ntBASIC2.02□□□□□ -2.09
CDCA3Q99618 AC012640.5-201ENST00000623897 319 ntBASIC2.02□□□□□ -2.09
CDCA3Q99618 MIR1248-201ENST00000629190 106 ntBASIC2.02□□□□□ -2.09
CDCA3Q99618 TPTEP1-208ENST00000636884 213 ntBASIC2.02□□□□□ -2.09
CDCA3Q99618 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.02□□□□□ -2.09
CDCA3Q99618 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CDCA3Q99618 MTND5P9-201ENST00000503854 1755 ntBASIC2.01□□□□□ -2.09
CDCA3Q99618 Y_RNA.88-201ENST00000363029 99 ntBASIC2.01□□□□□ -2.09
CDCA3Q99618 SNORA3A-201ENST00000364113 130 ntBASIC2.01□□□□□ -2.09
CDCA3Q99618 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CDCA3Q99618 RNU6-842P-201ENST00000384269 107 ntBASIC2.01□□□□□ -2.09
CDCA3Q99618 SNORD5.1-201ENST00000458800 75 ntBASIC2.01□□□□□ -2.09
CDCA3Q99618 AC087477.1-201ENST00000465747 340 ntBASIC2.01□□□□□ -2.09
CDCA3Q99618 AF186996.7-201ENST00000492781 209 ntBASIC2.01□□□□□ -2.09
CDCA3Q99618 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.01□□□□□ -2.09
CDCA3Q99618 AC034114.1-201ENST00000520293 285 ntBASIC2.01□□□□□ -2.09
CDCA3Q99618 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.01□□□□□ -2.09
CDCA3Q99618 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.01□□□□□ -2.09
CDCA3Q99618 AP001094.1-201ENST00000579805 193 ntBASIC2.01□□□□□ -2.09
CDCA3Q99618 MIR4448-201ENST00000584360 86 ntBASIC2.01□□□□□ -2.09
CDCA3Q99618 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.01□□□□□ -2.09
CDCA3Q99618 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.01□□□□□ -2.09
CDCA3Q99618 AC005520.5-201ENST00000613926 164 ntBASIC2.01□□□□□ -2.09
CDCA3Q99618 KPNA2P1-201ENST00000458289 1591 ntBASIC2.01□□□□□ -2.09
CDCA3Q99618 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
CDCA3Q99618 ZNF720P1-201ENST00000562403 1939 ntBASIC2.01□□□□□ -2.09
CDCA3Q99618 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
CDCA3Q99618 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2□□□□□ -2.09
CDCA3Q99618 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2□□□□□ -2.09
CDCA3Q99618 Y_RNA.48-201ENST00000362710 103 ntBASIC2□□□□□ -2.09
CDCA3Q99618 RNY1P10-201ENST00000363268 113 ntBASIC2□□□□□ -2.09
CDCA3Q99618 RNU6-457P-201ENST00000363999 107 ntBASIC2□□□□□ -2.09
CDCA3Q99618 RNU6-26P-201ENST00000383985 107 ntBASIC2□□□□□ -2.09
CDCA3Q99618 SNORA67.5-201ENST00000391036 107 ntBASIC2□□□□□ -2.09
CDCA3Q99618 AL356432.1-201ENST00000405809 419 ntBASIC2□□□□□ -2.09
CDCA3Q99618 RNU6-174P-201ENST00000410406 106 ntBASIC2□□□□□ -2.09
CDCA3Q99618 EDDM3CP-201ENST00000415977 425 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 228.4 ms