Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 AC015911.1-201ENST00000495111 156 ntBASIC2.53□□□□□ -2
SIN3AQ96ST3 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.53□□□□□ -2
SIN3AQ96ST3 AC022447.4-201ENST00000504053 364 ntBASIC2.53□□□□□ -2
SIN3AQ96ST3 CBX3P8-201ENST00000532412 525 ntBASIC2.53□□□□□ -2
SIN3AQ96ST3 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.53□□□□□ -2
SIN3AQ96ST3 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.53□□□□□ -2
SIN3AQ96ST3 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.53□□□□□ -2
SIN3AQ96ST3 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.53□□□□□ -2
SIN3AQ96ST3 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
SIN3AQ96ST3 MTND5P9-201ENST00000503854 1755 ntBASIC2.52□□□□□ -2.01
SIN3AQ96ST3 Y_RNA.2-201ENST00000362330 96 ntBASIC2.52□□□□□ -2.01
SIN3AQ96ST3 Y_RNA.48-201ENST00000362710 103 ntBASIC2.52□□□□□ -2.01
SIN3AQ96ST3 RNU5B-2P-201ENST00000363036 113 ntBASIC2.52□□□□□ -2.01
SIN3AQ96ST3 Y_RNA.259-201ENST00000364619 101 ntBASIC2.52□□□□□ -2.01
SIN3AQ96ST3 RNU6-968P-201ENST00000384076 107 ntBASIC2.52□□□□□ -2.01
SIN3AQ96ST3 SNORA26.9-201ENST00000391322 122 ntBASIC2.52□□□□□ -2.01
SIN3AQ96ST3 AL627390.1-201ENST00000396055 340 ntBASIC2.52□□□□□ -2.01
SIN3AQ96ST3 MTCYBP4-201ENST00000401524 249 ntBASIC2.52□□□□□ -2.01
SIN3AQ96ST3 AC243428.1-201ENST00000421099 264 ntBASIC2.52□□□□□ -2.01
SIN3AQ96ST3 AL445687.1-201ENST00000439946 251 ntBASIC2.52□□□□□ -2.01
SIN3AQ96ST3 HMGN2P23-201ENST00000456759 269 ntBASIC2.52□□□□□ -2.01
SIN3AQ96ST3 AC090515.1-201ENST00000465295 476 ntBASIC2.52□□□□□ -2.01
SIN3AQ96ST3 RN7SL274P-201ENST00000492268 272 ntBASIC2.52□□□□□ -2.01
SIN3AQ96ST3 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.52□□□□□ -2.01
SIN3AQ96ST3 SCARNA16.2-201ENST00000516520 172 ntBASIC2.52□□□□□ -2.01
SIN3AQ96ST3 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.52□□□□□ -2.01
SIN3AQ96ST3 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.52□□□□□ -2.01
SIN3AQ96ST3 AC016256.1-201ENST00000547971 354 ntBASIC2.52□□□□□ -2.01
SIN3AQ96ST3 AC007375.1-201ENST00000554513 578 ntBASIC2.52□□□□□ -2.01
SIN3AQ96ST3 MIR3136-201ENST00000583498 78 ntBASIC2.52□□□□□ -2.01
SIN3AQ96ST3 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.52□□□□□ -2.01
SIN3AQ96ST3 AL034555.1-201ENST00000604816 211 ntBASIC2.52□□□□□ -2.01
SIN3AQ96ST3 MIR6895-201ENST00000613497 78 ntBASIC2.52□□□□□ -2.01
SIN3AQ96ST3 PISRT1.1-201ENST00000616930 107 ntBASIC2.52□□□□□ -2.01
SIN3AQ96ST3 MIR203B-201ENST00000636080 86 ntBASIC2.52□□□□□ -2.01
SIN3AQ96ST3 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
SIN3AQ96ST3 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SIN3AQ96ST3 MIR504-201ENST00000385065 83 ntBASIC2.51□□□□□ -2.01
SIN3AQ96ST3 RNA5SP213-201ENST00000391031 106 ntBASIC2.51□□□□□ -2.01
SIN3AQ96ST3 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.51□□□□□ -2.01
SIN3AQ96ST3 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.51□□□□□ -2.01
SIN3AQ96ST3 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.51□□□□□ -2.01
SIN3AQ96ST3 ELOCP24-201ENST00000456370 334 ntBASIC2.51□□□□□ -2.01
SIN3AQ96ST3 RNU7-152P-201ENST00000458982 64 ntBASIC2.51□□□□□ -2.01
SIN3AQ96ST3 AF186996.7-201ENST00000492781 209 ntBASIC2.51□□□□□ -2.01
SIN3AQ96ST3 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.51□□□□□ -2.01
SIN3AQ96ST3 AC021146.2-201ENST00000504736 556 ntBASIC2.51□□□□□ -2.01
SIN3AQ96ST3 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.51□□□□□ -2.01
SIN3AQ96ST3 AC021231.3-201ENST00000558497 370 ntBASIC2.51□□□□□ -2.01
SIN3AQ96ST3 AC104581.2-201ENST00000572227 430 ntBASIC2.51□□□□□ -2.01
SIN3AQ96ST3 MIR4273-201ENST00000582824 84 ntBASIC2.51□□□□□ -2.01
SIN3AQ96ST3 MIR5690-201ENST00000583739 73 ntBASIC2.51□□□□□ -2.01
SIN3AQ96ST3 Z98751.3-201ENST00000604447 521 ntBASIC2.51□□□□□ -2.01
SIN3AQ96ST3 AC005014.2-201ENST00000607795 599 ntBASIC2.51□□□□□ -2.01
SIN3AQ96ST3 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SIN3AQ96ST3 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SIN3AQ96ST3 AC233981.2-201ENST00000611524 1614 ntBASIC2.5□□□□□ -2.01
SIN3AQ96ST3 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.5□□□□□ -2.01
SIN3AQ96ST3 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SIN3AQ96ST3 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
SIN3AQ96ST3 snoU2_19.1-201ENST00000362361 80 ntBASIC2.5□□□□□ -2.01
SIN3AQ96ST3 RNU4-15P-201ENST00000362613 141 ntBASIC2.5□□□□□ -2.01
SIN3AQ96ST3 RNU6-142P-201ENST00000384019 107 ntBASIC2.5□□□□□ -2.01
SIN3AQ96ST3 RNU6-1032P-201ENST00000384100 107 ntBASIC2.5□□□□□ -2.01
SIN3AQ96ST3 Y_RNA.535-201ENST00000384612 99 ntBASIC2.5□□□□□ -2.01
SIN3AQ96ST3 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.5□□□□□ -2.01
SIN3AQ96ST3 Y_RNA.653-201ENST00000459091 95 ntBASIC2.5□□□□□ -2.01
SIN3AQ96ST3 AC097473.1-201ENST00000508142 408 ntBASIC2.5□□□□□ -2.01
SIN3AQ96ST3 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
SIN3AQ96ST3 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.5□□□□□ -2.01
SIN3AQ96ST3 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.5□□□□□ -2.01
SIN3AQ96ST3 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.5□□□□□ -2.01
SIN3AQ96ST3 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
SIN3AQ96ST3 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.5□□□□□ -2.01
SIN3AQ96ST3 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.5□□□□□ -2.01
SIN3AQ96ST3 ZNF299P-201ENST00000406845 1804 ntBASIC2.49□□□□□ -2.01
SIN3AQ96ST3 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
SIN3AQ96ST3 RNU6-595P-201ENST00000363944 107 ntBASIC2.49□□□□□ -2.01
SIN3AQ96ST3 RNU6-890P-201ENST00000384121 107 ntBASIC2.49□□□□□ -2.01
SIN3AQ96ST3 SNORA75.6-201ENST00000391318 127 ntBASIC2.49□□□□□ -2.01
SIN3AQ96ST3 RPL30P15-201ENST00000457129 321 ntBASIC2.49□□□□□ -2.01
SIN3AQ96ST3 RPL23AP75-201ENST00000491601 451 ntBASIC2.49□□□□□ -2.01
SIN3AQ96ST3 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.49□□□□□ -2.01
SIN3AQ96ST3 AC010928.2-201ENST00000588017 287 ntBASIC2.49□□□□□ -2.01
SIN3AQ96ST3 AL050343.2-201ENST00000607338 280 ntBASIC2.49□□□□□ -2.01
SIN3AQ96ST3 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.49□□□□□ -2.01
SIN3AQ96ST3 AC084781.2-201ENST00000615568 161 ntBASIC2.49□□□□□ -2.01
SIN3AQ96ST3 uc_338.20-201ENST00000621563 178 ntBASIC2.49□□□□□ -2.01
SIN3AQ96ST3 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
SIN3AQ96ST3 AC006026.1-201ENST00000444025 1803 ntBASIC2.49□□□□□ -2.01
SIN3AQ96ST3 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.48□□□□□ -2.01
SIN3AQ96ST3 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.48□□□□□ -2.01
SIN3AQ96ST3 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
SIN3AQ96ST3 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.48□□□□□ -2.01
SIN3AQ96ST3 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
SIN3AQ96ST3 RNA5SP201-201ENST00000410316 124 ntBASIC2.48□□□□□ -2.01
SIN3AQ96ST3 AC003685.2-201ENST00000422795 395 ntBASIC2.48□□□□□ -2.01
SIN3AQ96ST3 AC012306.1-201ENST00000423267 114 ntBASIC2.48□□□□□ -2.01
SIN3AQ96ST3 AC236972.2-201ENST00000434979 310 ntBASIC2.48□□□□□ -2.01
SIN3AQ96ST3 Z82188.1-201ENST00000436709 154 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms