Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 Y_RNA.132-201ENST00000363421 102 ntBASIC1.7□□□□□ -2.14
ZNF560Q96MR9 SNORA18.2-201ENST00000383865 132 ntBASIC1.7□□□□□ -2.14
ZNF560Q96MR9 RNU6-483P-201ENST00000384088 108 ntBASIC1.7□□□□□ -2.14
ZNF560Q96MR9 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
ZNF560Q96MR9 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
ZNF560Q96MR9 MIR300-201ENST00000401138 83 ntBASIC1.7□□□□□ -2.14
ZNF560Q96MR9 RNA5SP494-201ENST00000410653 129 ntBASIC1.7□□□□□ -2.14
ZNF560Q96MR9 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.7□□□□□ -2.14
ZNF560Q96MR9 USP9YP28-201ENST00000435142 589 ntBASIC1.7□□□□□ -2.14
ZNF560Q96MR9 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.7□□□□□ -2.14
ZNF560Q96MR9 AC010531.2-201ENST00000465012 153 ntBASIC1.7□□□□□ -2.14
ZNF560Q96MR9 AC010409.1-201ENST00000487382 476 ntBASIC1.7□□□□□ -2.14
ZNF560Q96MR9 AC093534.1-201ENST00000504977 132 ntBASIC1.7□□□□□ -2.14
ZNF560Q96MR9 RNU6-1332P-201ENST00000516666 104 ntBASIC1.7□□□□□ -2.14
ZNF560Q96MR9 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.7□□□□□ -2.14
ZNF560Q96MR9 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
ZNF560Q96MR9 AC026470.2-201ENST00000561492 181 ntBASIC1.7□□□□□ -2.14
ZNF560Q96MR9 AC092954.2-201ENST00000609103 430 ntBASIC1.7□□□□□ -2.14
ZNF560Q96MR9 AL359697.1-201ENST00000624879 587 ntBASIC1.7□□□□□ -2.14
ZNF560Q96MR9 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.7□□□□□ -2.14
ZNF560Q96MR9 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
ZNF560Q96MR9 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
ZNF560Q96MR9 RNU6-254P-201ENST00000363377 107 ntBASIC1.69□□□□□ -2.14
ZNF560Q96MR9 RNU6-112P-201ENST00000363599 104 ntBASIC1.69□□□□□ -2.14
ZNF560Q96MR9 RNU6-128P-201ENST00000383976 107 ntBASIC1.69□□□□□ -2.14
ZNF560Q96MR9 RNU6-784P-201ENST00000384330 106 ntBASIC1.69□□□□□ -2.14
ZNF560Q96MR9 MIR30A-201ENST00000385092 71 ntBASIC1.69□□□□□ -2.14
ZNF560Q96MR9 MIR934-201ENST00000401241 83 ntBASIC1.69□□□□□ -2.14
ZNF560Q96MR9 RNU6-908P-201ENST00000410160 94 ntBASIC1.69□□□□□ -2.14
ZNF560Q96MR9 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
ZNF560Q96MR9 MTND3P21-201ENST00000433774 331 ntBASIC1.69□□□□□ -2.14
ZNF560Q96MR9 NDUFA5P4-201ENST00000436704 385 ntBASIC1.69□□□□□ -2.14
ZNF560Q96MR9 AL357134.1-201ENST00000445848 426 ntBASIC1.69□□□□□ -2.14
ZNF560Q96MR9 AC083904.1-201ENST00000487828 231 ntBASIC1.69□□□□□ -2.14
ZNF560Q96MR9 RNA5SP458-201ENST00000516188 119 ntBASIC1.69□□□□□ -2.14
ZNF560Q96MR9 RNU6-970P-201ENST00000516312 107 ntBASIC1.69□□□□□ -2.14
ZNF560Q96MR9 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.69□□□□□ -2.14
ZNF560Q96MR9 DEFB131C-201ENST00000528817 165 ntBASIC1.69□□□□□ -2.14
ZNF560Q96MR9 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.69□□□□□ -2.14
ZNF560Q96MR9 AC026371.1-201ENST00000551867 419 ntBASIC1.69□□□□□ -2.14
ZNF560Q96MR9 AC005562.2-201ENST00000618264 111 ntBASIC1.69□□□□□ -2.14
ZNF560Q96MR9 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.69□□□□□ -2.14
ZNF560Q96MR9 AL159152.1-201ENST00000635019 2587 ntBASIC1.68□□□□□ -2.14
ZNF560Q96MR9 RNU6-457P-201ENST00000363999 107 ntBASIC1.68□□□□□ -2.14
ZNF560Q96MR9 RNU4-24P-201ENST00000364565 139 ntBASIC1.68□□□□□ -2.14
ZNF560Q96MR9 RNU6-968P-201ENST00000384076 107 ntBASIC1.68□□□□□ -2.14
ZNF560Q96MR9 RNU6-933P-201ENST00000384424 107 ntBASIC1.68□□□□□ -2.14
ZNF560Q96MR9 MIR517C-201ENST00000385103 95 ntBASIC1.68□□□□□ -2.14
ZNF560Q96MR9 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.68□□□□□ -2.14
ZNF560Q96MR9 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.68□□□□□ -2.14
ZNF560Q96MR9 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.68□□□□□ -2.14
ZNF560Q96MR9 AC096745.1-201ENST00000509945 370 ntBASIC1.68□□□□□ -2.14
ZNF560Q96MR9 AC067942.3-201ENST00000512025 362 ntBASIC1.68□□□□□ -2.14
ZNF560Q96MR9 SNORA31.17-201ENST00000516953 127 ntBASIC1.68□□□□□ -2.14
ZNF560Q96MR9 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.68□□□□□ -2.14
ZNF560Q96MR9 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.68□□□□□ -2.14
ZNF560Q96MR9 MRPS36P4-201ENST00000534436 298 ntBASIC1.68□□□□□ -2.14
ZNF560Q96MR9 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.68□□□□□ -2.14
ZNF560Q96MR9 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.68□□□□□ -2.14
ZNF560Q96MR9 MIR5094-201ENST00000578766 85 ntBASIC1.68□□□□□ -2.14
ZNF560Q96MR9 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.68□□□□□ -2.14
ZNF560Q96MR9 AC010525.2-201ENST00000590920 195 ntBASIC1.68□□□□□ -2.14
ZNF560Q96MR9 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.68□□□□□ -2.14
ZNF560Q96MR9 AC103591.3-201ENST00000608684 209 ntBASIC1.68□□□□□ -2.14
ZNF560Q96MR9 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
ZNF560Q96MR9 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.68□□□□□ -2.14
ZNF560Q96MR9 TCL6_2.1-201ENST00000615162 119 ntBASIC1.68□□□□□ -2.14
ZNF560Q96MR9 SNORD113-7-201ENST00000363762 77 ntBASIC1.67□□□□□ -2.14
ZNF560Q96MR9 RNU6-780P-201ENST00000391030 104 ntBASIC1.67□□□□□ -2.14
ZNF560Q96MR9 SNORA17.3-201ENST00000391159 129 ntBASIC1.67□□□□□ -2.14
ZNF560Q96MR9 AL513185.2-201ENST00000425543 193 ntBASIC1.67□□□□□ -2.14
ZNF560Q96MR9 MTATP6P26-201ENST00000445926 662 ntBASIC1.67□□□□□ -2.14
ZNF560Q96MR9 ATP5J2P3-201ENST00000451550 258 ntBASIC1.67□□□□□ -2.14
ZNF560Q96MR9 OR2AQ1P-201ENST00000451972 200 ntBASIC1.67□□□□□ -2.14
ZNF560Q96MR9 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.67□□□□□ -2.14
ZNF560Q96MR9 AC007215.1-201ENST00000464893 276 ntBASIC1.67□□□□□ -2.14
ZNF560Q96MR9 AC087477.1-201ENST00000465747 340 ntBASIC1.67□□□□□ -2.14
ZNF560Q96MR9 AC027575.1-201ENST00000481064 460 ntBASIC1.67□□□□□ -2.14
ZNF560Q96MR9 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.67□□□□□ -2.14
ZNF560Q96MR9 RNU2-34P-201ENST00000516534 121 ntBASIC1.67□□□□□ -2.14
ZNF560Q96MR9 Y_RNA.704-201ENST00000516851 102 ntBASIC1.67□□□□□ -2.14
ZNF560Q96MR9 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.67□□□□□ -2.14
ZNF560Q96MR9 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.67□□□□□ -2.14
ZNF560Q96MR9 MIR4285-201ENST00000581001 85 ntBASIC1.67□□□□□ -2.14
ZNF560Q96MR9 AP000942.3-201ENST00000603702 160 ntBASIC1.67□□□□□ -2.14
ZNF560Q96MR9 AC016727.2-201ENST00000603988 621 ntBASIC1.67□□□□□ -2.14
ZNF560Q96MR9 AC104458.1-201ENST00000608243 463 ntBASIC1.67□□□□□ -2.14
ZNF560Q96MR9 AC083806.3-201ENST00000614016 455 ntBASIC1.67□□□□□ -2.14
ZNF560Q96MR9 AC137590.2-201ENST00000619709 240 ntBASIC1.67□□□□□ -2.14
ZNF560Q96MR9 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.67□□□□□ -2.14
ZNF560Q96MR9 MIR1321-201ENST00000637766 79 ntBASIC1.67□□□□□ -2.14
ZNF560Q96MR9 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.66□□□□□ -2.14
ZNF560Q96MR9 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
ZNF560Q96MR9 RNU6-545P-201ENST00000362681 104 ntBASIC1.66□□□□□ -2.14
ZNF560Q96MR9 Y_RNA.140-201ENST00000363474 103 ntBASIC1.66□□□□□ -2.14
ZNF560Q96MR9 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.66□□□□□ -2.14
ZNF560Q96MR9 U8.10-201ENST00000384260 133 ntBASIC1.66□□□□□ -2.14
ZNF560Q96MR9 RNU6-296P-201ENST00000384608 107 ntBASIC1.66□□□□□ -2.14
ZNF560Q96MR9 MIR521-1-201ENST00000384902 87 ntBASIC1.66□□□□□ -2.14
ZNF560Q96MR9 SNORA67.6-201ENST00000391093 99 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 136.3 ms