Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 RNU11-3P-201ENST00000391111 133 ntBASIC2.05□□□□□ -2.08
PDLIM5Q96HC4 MTCYBP4-201ENST00000401524 249 ntBASIC2.05□□□□□ -2.08
PDLIM5Q96HC4 SNORA11.4-201ENST00000408823 129 ntBASIC2.05□□□□□ -2.08
PDLIM5Q96HC4 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.05□□□□□ -2.08
PDLIM5Q96HC4 AL135786.1-201ENST00000415892 214 ntBASIC2.05□□□□□ -2.08
PDLIM5Q96HC4 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.05□□□□□ -2.08
PDLIM5Q96HC4 Z82205.1-201ENST00000428456 297 ntBASIC2.05□□□□□ -2.08
PDLIM5Q96HC4 AC236972.2-201ENST00000434979 310 ntBASIC2.05□□□□□ -2.08
PDLIM5Q96HC4 UBE2V1P7-201ENST00000446395 340 ntBASIC2.05□□□□□ -2.08
PDLIM5Q96HC4 AC079354.2-201ENST00000453523 154 ntBASIC2.05□□□□□ -2.08
PDLIM5Q96HC4 RPL23AP3-201ENST00000453844 468 ntBASIC2.05□□□□□ -2.08
PDLIM5Q96HC4 ELOCP24-201ENST00000456370 334 ntBASIC2.05□□□□□ -2.08
PDLIM5Q96HC4 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.05□□□□□ -2.08
PDLIM5Q96HC4 RNU6-717P-201ENST00000459076 104 ntBASIC2.05□□□□□ -2.08
PDLIM5Q96HC4 FO393415.2-201ENST00000480085 343 ntBASIC2.05□□□□□ -2.08
PDLIM5Q96HC4 AC114801.2-201ENST00000503825 781 ntBASIC2.05□□□□□ -2.08
PDLIM5Q96HC4 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.05□□□□□ -2.08
PDLIM5Q96HC4 AC005741.1-201ENST00000511094 432 ntBASIC2.05□□□□□ -2.08
PDLIM5Q96HC4 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.05□□□□□ -2.08
PDLIM5Q96HC4 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.05□□□□□ -2.08
PDLIM5Q96HC4 MIR1273D-201ENST00000577266 86 ntBASIC2.05□□□□□ -2.08
PDLIM5Q96HC4 AL109918.3-201ENST00000603072 338 ntBASIC2.05□□□□□ -2.08
PDLIM5Q96HC4 CYP2C61P-201ENST00000604072 290 ntBASIC2.05□□□□□ -2.08
PDLIM5Q96HC4 AL034555.1-201ENST00000604816 211 ntBASIC2.05□□□□□ -2.08
PDLIM5Q96HC4 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.05□□□□□ -2.08
PDLIM5Q96HC4 AL450472.1-202ENST00000637286 180 ntBASIC2.05□□□□□ -2.08
PDLIM5Q96HC4 AC073544.1-201ENST00000600110 1595 ntBASIC2.05□□□□□ -2.08
PDLIM5Q96HC4 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
PDLIM5Q96HC4 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
PDLIM5Q96HC4 Y_RNA.2-201ENST00000362330 96 ntBASIC2.04□□□□□ -2.08
PDLIM5Q96HC4 Y_RNA.99-201ENST00000363138 105 ntBASIC2.04□□□□□ -2.08
PDLIM5Q96HC4 Y_RNA.187-201ENST00000363918 113 ntBASIC2.04□□□□□ -2.08
PDLIM5Q96HC4 RNU4-76P-201ENST00000364509 141 ntBASIC2.04□□□□□ -2.08
PDLIM5Q96HC4 Y_RNA.579-201ENST00000390939 94 ntBASIC2.04□□□□□ -2.08
PDLIM5Q96HC4 AL357139.1-201ENST00000407792 426 ntBASIC2.04□□□□□ -2.08
PDLIM5Q96HC4 MTND4P28-201ENST00000426217 387 ntBASIC2.04□□□□□ -2.08
PDLIM5Q96HC4 AC078809.1-201ENST00000427601 140 ntBASIC2.04□□□□□ -2.08
PDLIM5Q96HC4 AC244670.1-201ENST00000436879 112 ntBASIC2.04□□□□□ -2.08
PDLIM5Q96HC4 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.04□□□□□ -2.08
PDLIM5Q96HC4 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.04□□□□□ -2.08
PDLIM5Q96HC4 AL021397.1-201ENST00000451806 248 ntBASIC2.04□□□□□ -2.08
PDLIM5Q96HC4 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.04□□□□□ -2.08
PDLIM5Q96HC4 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.04□□□□□ -2.08
PDLIM5Q96HC4 ACA59.1-201ENST00000515966 143 ntBASIC2.04□□□□□ -2.08
PDLIM5Q96HC4 RNU1-40P-201ENST00000516816 164 ntBASIC2.04□□□□□ -2.08
PDLIM5Q96HC4 RNU1-97P-201ENST00000516872 164 ntBASIC2.04□□□□□ -2.08
PDLIM5Q96HC4 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.04□□□□□ -2.08
PDLIM5Q96HC4 AC126177.8-201ENST00000618339 1015 ntBASIC2.04□□□□□ -2.08
PDLIM5Q96HC4 AC022140.2-201ENST00000623500 188 ntBASIC2.04□□□□□ -2.08
PDLIM5Q96HC4 SNORA43.4-201ENST00000629559 138 ntBASIC2.04□□□□□ -2.08
PDLIM5Q96HC4 SNORD98-201ENST00000636377 67 ntBASIC2.04□□□□□ -2.08
PDLIM5Q96HC4 AL359851.1-201ENST00000569460 4997 ntBASIC2.04□□□□□ -2.08
PDLIM5Q96HC4 Y_RNA.48-201ENST00000362710 103 ntBASIC2.03□□□□□ -2.08
PDLIM5Q96HC4 Y_RNA.123-201ENST00000363338 102 ntBASIC2.03□□□□□ -2.08
PDLIM5Q96HC4 RNA5SP138-201ENST00000365098 114 ntBASIC2.03□□□□□ -2.08
PDLIM5Q96HC4 Y_RNA.394-201ENST00000383942 103 ntBASIC2.03□□□□□ -2.08
PDLIM5Q96HC4 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
PDLIM5Q96HC4 RNA5SP212-201ENST00000391223 107 ntBASIC2.03□□□□□ -2.08
PDLIM5Q96HC4 AL033519.2-201ENST00000403958 392 ntBASIC2.03□□□□□ -2.08
PDLIM5Q96HC4 MIR1262-201ENST00000408276 93 ntBASIC2.03□□□□□ -2.08
PDLIM5Q96HC4 RPS20P15-201ENST00000412792 311 ntBASIC2.03□□□□□ -2.08
PDLIM5Q96HC4 MTCO2P27-201ENST00000420740 428 ntBASIC2.03□□□□□ -2.08
PDLIM5Q96HC4 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.03□□□□□ -2.08
PDLIM5Q96HC4 AC243428.1-201ENST00000421099 264 ntBASIC2.03□□□□□ -2.08
PDLIM5Q96HC4 EIF4EP2-201ENST00000422816 654 ntBASIC2.03□□□□□ -2.08
PDLIM5Q96HC4 HMGN2P38-201ENST00000423806 265 ntBASIC2.03□□□□□ -2.08
PDLIM5Q96HC4 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.03□□□□□ -2.08
PDLIM5Q96HC4 RPL30P15-201ENST00000457129 321 ntBASIC2.03□□□□□ -2.08
PDLIM5Q96HC4 Y_RNA.653-201ENST00000459091 95 ntBASIC2.03□□□□□ -2.08
PDLIM5Q96HC4 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.03□□□□□ -2.08
PDLIM5Q96HC4 IGKV3-31-201ENST00000523109 329 ntBASIC2.03□□□□□ -2.08
PDLIM5Q96HC4 MRPS36P4-201ENST00000534436 298 ntBASIC2.03□□□□□ -2.08
PDLIM5Q96HC4 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.03□□□□□ -2.08
PDLIM5Q96HC4 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.03□□□□□ -2.08
PDLIM5Q96HC4 AC109446.1-201ENST00000566172 220 ntBASIC2.03□□□□□ -2.08
PDLIM5Q96HC4 MIR4299-201ENST00000577899 72 ntBASIC2.03□□□□□ -2.08
PDLIM5Q96HC4 AL158827.2-201ENST00000602494 330 ntBASIC2.03□□□□□ -2.08
PDLIM5Q96HC4 AC009318.2-201ENST00000610917 651 ntBASIC2.03□□□□□ -2.08
PDLIM5Q96HC4 AL773524.1-201ENST00000614065 229 ntBASIC2.03□□□□□ -2.08
PDLIM5Q96HC4 PISRT1.1-201ENST00000616930 107 ntBASIC2.03□□□□□ -2.08
PDLIM5Q96HC4 AL590808.1-201ENST00000618696 141 ntBASIC2.03□□□□□ -2.08
PDLIM5Q96HC4 AL691447.3-201ENST00000635020 330 ntBASIC2.03□□□□□ -2.08
PDLIM5Q96HC4 IGHVIII-44-202ENST00000636235 289 ntBASIC2.03□□□□□ -2.08
PDLIM5Q96HC4 MIR219B-201ENST00000637023 88 ntBASIC2.03□□□□□ -2.08
PDLIM5Q96HC4 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
PDLIM5Q96HC4 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
PDLIM5Q96HC4 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.03□□□□□ -2.09
PDLIM5Q96HC4 AC092881.1-201ENST00000638218 2733 ntBASIC2.03□□□□□ -2.09
PDLIM5Q96HC4 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
PDLIM5Q96HC4 AC009541.1-201ENST00000438279 2662 ntBASIC2.02□□□□□ -2.09
PDLIM5Q96HC4 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
PDLIM5Q96HC4 Y_RNA.111-201ENST00000363248 100 ntBASIC2.02□□□□□ -2.09
PDLIM5Q96HC4 Y_RNA.315-201ENST00000365117 102 ntBASIC2.02□□□□□ -2.09
PDLIM5Q96HC4 Y_RNA.460-201ENST00000384255 102 ntBASIC2.02□□□□□ -2.09
PDLIM5Q96HC4 Y_RNA.533-201ENST00000384596 114 ntBASIC2.02□□□□□ -2.09
PDLIM5Q96HC4 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
PDLIM5Q96HC4 MIR676-201ENST00000390702 67 ntBASIC2.02□□□□□ -2.09
PDLIM5Q96HC4 SNORA75.6-201ENST00000391318 127 ntBASIC2.02□□□□□ -2.09
PDLIM5Q96HC4 RN7SKP61-201ENST00000410642 295 ntBASIC2.02□□□□□ -2.09
PDLIM5Q96HC4 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms