Protein–RNA interactions for Protein: Q96CM3

RPUSD4, Mitochondrial RNA pseudouridine synthase RPUSD4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4Q96CM3 BX322639.1-202ENST00000423987 2213 ntBASIC1.44□□□□□ -2.18
RPUSD4Q96CM3 AC233981.2-201ENST00000611524 1614 ntBASIC1.44□□□□□ -2.18
RPUSD4Q96CM3 ZNF355P-201ENST00000427301 3216 ntBASIC1.44□□□□□ -2.18
RPUSD4Q96CM3 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.43□□□□□ -2.18
RPUSD4Q96CM3 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
RPUSD4Q96CM3 MIR449A-201ENST00000362113 91 ntBASIC1.43□□□□□ -2.18
RPUSD4Q96CM3 RNU6-1252P-201ENST00000363054 104 ntBASIC1.43□□□□□ -2.18
RPUSD4Q96CM3 RNU6-137P-201ENST00000363680 108 ntBASIC1.43□□□□□ -2.18
RPUSD4Q96CM3 Y_RNA.301-201ENST00000364990 103 ntBASIC1.43□□□□□ -2.18
RPUSD4Q96CM3 U8.10-201ENST00000384260 133 ntBASIC1.43□□□□□ -2.18
RPUSD4Q96CM3 MIR517A-201ENST00000385001 87 ntBASIC1.43□□□□□ -2.18
RPUSD4Q96CM3 MIR634-201ENST00000385208 97 ntBASIC1.43□□□□□ -2.18
RPUSD4Q96CM3 SNORA12.2-201ENST00000391040 156 ntBASIC1.43□□□□□ -2.18
RPUSD4Q96CM3 RNU11-3P-201ENST00000391111 133 ntBASIC1.43□□□□□ -2.18
RPUSD4Q96CM3 RN7SKP223-201ENST00000410582 62 ntBASIC1.43□□□□□ -2.18
RPUSD4Q96CM3 MTCO3P46-201ENST00000425787 232 ntBASIC1.43□□□□□ -2.18
RPUSD4Q96CM3 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.43□□□□□ -2.18
RPUSD4Q96CM3 AL353572.1-201ENST00000442490 417 ntBASIC1.43□□□□□ -2.18
RPUSD4Q96CM3 AL357134.1-201ENST00000445848 426 ntBASIC1.43□□□□□ -2.18
RPUSD4Q96CM3 AC007395.1-201ENST00000451333 677 ntBASIC1.43□□□□□ -2.18
RPUSD4Q96CM3 snoU13.6-201ENST00000458785 104 ntBASIC1.43□□□□□ -2.18
RPUSD4Q96CM3 AC087477.1-201ENST00000465747 340 ntBASIC1.43□□□□□ -2.18
RPUSD4Q96CM3 RNU2-34P-201ENST00000516534 121 ntBASIC1.43□□□□□ -2.18
RPUSD4Q96CM3 RNU5F-4P-201ENST00000516581 114 ntBASIC1.43□□□□□ -2.18
RPUSD4Q96CM3 AF235103.2-201ENST00000525753 346 ntBASIC1.43□□□□□ -2.18
RPUSD4Q96CM3 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.43□□□□□ -2.18
RPUSD4Q96CM3 AC243960.4-201ENST00000600532 288 ntBASIC1.43□□□□□ -2.18
RPUSD4Q96CM3 AC124303.1-201ENST00000605703 360 ntBASIC1.43□□□□□ -2.18
RPUSD4Q96CM3 MIR3976-201ENST00000606807 139 ntBASIC1.43□□□□□ -2.18
RPUSD4Q96CM3 TCL6_2.1-201ENST00000615162 119 ntBASIC1.43□□□□□ -2.18
RPUSD4Q96CM3 AL590808.1-201ENST00000618696 141 ntBASIC1.43□□□□□ -2.18
RPUSD4Q96CM3 AC130454.1-201ENST00000622948 401 ntBASIC1.43□□□□□ -2.18
RPUSD4Q96CM3 AC022513.1-201ENST00000624512 117 ntBASIC1.43□□□□□ -2.18
RPUSD4Q96CM3 AC064859.1-201ENST00000624741 174 ntBASIC1.43□□□□□ -2.18
RPUSD4Q96CM3 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.43□□□□□ -2.18
RPUSD4Q96CM3 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
RPUSD4Q96CM3 SNORD115-3-201ENST00000363100 82 ntBASIC1.42□□□□□ -2.18
RPUSD4Q96CM3 RNU6-23P-201ENST00000363283 107 ntBASIC1.42□□□□□ -2.18
RPUSD4Q96CM3 RNU4-9P-201ENST00000364951 139 ntBASIC1.42□□□□□ -2.18
RPUSD4Q96CM3 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.42□□□□□ -2.18
RPUSD4Q96CM3 MIR597-201ENST00000384968 97 ntBASIC1.42□□□□□ -2.18
RPUSD4Q96CM3 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
RPUSD4Q96CM3 RNA5SP501-201ENST00000410990 112 ntBASIC1.42□□□□□ -2.18
RPUSD4Q96CM3 AL139415.2-201ENST00000431968 163 ntBASIC1.42□□□□□ -2.18
RPUSD4Q96CM3 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.42□□□□□ -2.18
RPUSD4Q96CM3 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.42□□□□□ -2.18
RPUSD4Q96CM3 AC009237.7-201ENST00000447357 229 ntBASIC1.42□□□□□ -2.18
RPUSD4Q96CM3 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.42□□□□□ -2.18
RPUSD4Q96CM3 RNU7-14P-201ENST00000459331 62 ntBASIC1.42□□□□□ -2.18
RPUSD4Q96CM3 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.42□□□□□ -2.18
RPUSD4Q96CM3 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
RPUSD4Q96CM3 AC067942.3-201ENST00000512025 362 ntBASIC1.42□□□□□ -2.18
RPUSD4Q96CM3 RNU6-718P-201ENST00000516166 105 ntBASIC1.42□□□□□ -2.18
RPUSD4Q96CM3 RNA5SP54-201ENST00000516951 92 ntBASIC1.42□□□□□ -2.18
RPUSD4Q96CM3 RNA5SP454-201ENST00000517231 127 ntBASIC1.42□□□□□ -2.18
RPUSD4Q96CM3 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.42□□□□□ -2.18
RPUSD4Q96CM3 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.42□□□□□ -2.18
RPUSD4Q96CM3 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.42□□□□□ -2.18
RPUSD4Q96CM3 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.42□□□□□ -2.18
RPUSD4Q96CM3 MIR4285-201ENST00000581001 85 ntBASIC1.42□□□□□ -2.18
RPUSD4Q96CM3 POLR3GP2-201ENST00000588366 668 ntBASIC1.42□□□□□ -2.18
RPUSD4Q96CM3 AC060780.3-201ENST00000589464 80 ntBASIC1.42□□□□□ -2.18
RPUSD4Q96CM3 AC016727.2-201ENST00000603988 621 ntBASIC1.42□□□□□ -2.18
RPUSD4Q96CM3 AC010900.2-201ENST00000604508 210 ntBASIC1.42□□□□□ -2.18
RPUSD4Q96CM3 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.42□□□□□ -2.18
RPUSD4Q96CM3 AC122108.2-201ENST00000611946 526 ntBASIC1.42□□□□□ -2.18
RPUSD4Q96CM3 AL590240.4-201ENST00000616908 390 ntBASIC1.42□□□□□ -2.18
RPUSD4Q96CM3 WWP1P1-201ENST00000466609 2769 ntBASIC1.42□□□□□ -2.18
RPUSD4Q96CM3 MTND4P5-201ENST00000435821 1374 ntBASIC1.42□□□□□ -2.18
RPUSD4Q96CM3 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.41□□□□□ -2.18
RPUSD4Q96CM3 SNORA18.2-201ENST00000383865 132 ntBASIC1.41□□□□□ -2.18
RPUSD4Q96CM3 SNORA3.2-201ENST00000408221 125 ntBASIC1.41□□□□□ -2.18
RPUSD4Q96CM3 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.41□□□□□ -2.18
RPUSD4Q96CM3 RNU6-174P-201ENST00000410406 106 ntBASIC1.41□□□□□ -2.18
RPUSD4Q96CM3 MTND4LP16-201ENST00000440828 295 ntBASIC1.41□□□□□ -2.18
RPUSD4Q96CM3 RNU6-329P-201ENST00000459618 107 ntBASIC1.41□□□□□ -2.18
RPUSD4Q96CM3 AC010531.2-201ENST00000465012 153 ntBASIC1.41□□□□□ -2.18
RPUSD4Q96CM3 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.41□□□□□ -2.18
RPUSD4Q96CM3 ACA59.1-201ENST00000515966 143 ntBASIC1.41□□□□□ -2.18
RPUSD4Q96CM3 RNU6-970P-201ENST00000516312 107 ntBASIC1.41□□□□□ -2.18
RPUSD4Q96CM3 RNU6-358P-201ENST00000516564 75 ntBASIC1.41□□□□□ -2.18
RPUSD4Q96CM3 RNU6-566P-201ENST00000516790 107 ntBASIC1.41□□□□□ -2.18
RPUSD4Q96CM3 RNU6-1088P-201ENST00000516850 104 ntBASIC1.41□□□□□ -2.18
RPUSD4Q96CM3 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.41□□□□□ -2.18
RPUSD4Q96CM3 AC025754.2-201ENST00000606491 432 ntBASIC1.41□□□□□ -2.18
RPUSD4Q96CM3 AC019193.3-201ENST00000609144 554 ntBASIC1.41□□□□□ -2.18
RPUSD4Q96CM3 AL353149.1-201ENST00000610667 244 ntBASIC1.41□□□□□ -2.18
RPUSD4Q96CM3 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.41□□□□□ -2.18
RPUSD4Q96CM3 AC100810.6-201ENST00000638068 285 ntBASIC1.41□□□□□ -2.18
RPUSD4Q96CM3 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
RPUSD4Q96CM3 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.4□□□□□ -2.19
RPUSD4Q96CM3 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
RPUSD4Q96CM3 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
RPUSD4Q96CM3 Y_RNA.72-201ENST00000362894 103 ntBASIC1.4□□□□□ -2.19
RPUSD4Q96CM3 SNORD48-201ENST00000364953 64 ntBASIC1.4□□□□□ -2.19
RPUSD4Q96CM3 RNU6-438P-201ENST00000365561 103 ntBASIC1.4□□□□□ -2.19
RPUSD4Q96CM3 RNU6-245P-201ENST00000384020 107 ntBASIC1.4□□□□□ -2.19
RPUSD4Q96CM3 Y_RNA.490-201ENST00000384413 102 ntBASIC1.4□□□□□ -2.19
RPUSD4Q96CM3 RNU6-790P-201ENST00000384479 105 ntBASIC1.4□□□□□ -2.19
RPUSD4Q96CM3 RNU6-510P-201ENST00000391239 108 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms