Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 ANXA2P1-201ENST00000505539 926 ntBASIC3.04□□□□□ -1.92
CHMP4CQ96CF2 AC008413.1-201ENST00000511864 177 ntBASIC3.04□□□□□ -1.92
CHMP4CQ96CF2 RNA5SP82-201ENST00000516707 92 ntBASIC3.04□□□□□ -1.92
CHMP4CQ96CF2 RNU6-58P-201ENST00000517143 103 ntBASIC3.04□□□□□ -1.92
CHMP4CQ96CF2 AC091144.1-201ENST00000519573 138 ntBASIC3.04□□□□□ -1.92
CHMP4CQ96CF2 CBX3P7-201ENST00000532876 502 ntBASIC3.04□□□□□ -1.92
CHMP4CQ96CF2 AC026470.2-201ENST00000561492 181 ntBASIC3.04□□□□□ -1.92
CHMP4CQ96CF2 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.04□□□□□ -1.92
CHMP4CQ96CF2 AC016727.2-201ENST00000603988 621 ntBASIC3.04□□□□□ -1.92
CHMP4CQ96CF2 U4.3-201ENST00000621047 82 ntBASIC3.04□□□□□ -1.92
CHMP4CQ96CF2 AC134503.1-201ENST00000633048 54 ntBASIC3.04□□□□□ -1.92
CHMP4CQ96CF2 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.04□□□□□ -1.92
CHMP4CQ96CF2 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
CHMP4CQ96CF2 MTND5P16-201ENST00000460269 1703 ntBASIC3.03□□□□□ -1.92
CHMP4CQ96CF2 Y_RNA.112-201ENST00000363250 102 ntBASIC3.03□□□□□ -1.92
CHMP4CQ96CF2 SNORA38-201ENST00000363946 132 ntBASIC3.03□□□□□ -1.92
CHMP4CQ96CF2 SNORA69.1-201ENST00000390904 137 ntBASIC3.03□□□□□ -1.92
CHMP4CQ96CF2 MIR1302-11-201ENST00000408051 138 ntBASIC3.03□□□□□ -1.92
CHMP4CQ96CF2 MIR1302-9-201ENST00000408365 138 ntBASIC3.03□□□□□ -1.92
CHMP4CQ96CF2 MIR1302-10-201ENST00000408734 138 ntBASIC3.03□□□□□ -1.92
CHMP4CQ96CF2 AL354751.2-201ENST00000415471 210 ntBASIC3.03□□□□□ -1.92
CHMP4CQ96CF2 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.03□□□□□ -1.92
CHMP4CQ96CF2 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.03□□□□□ -1.92
CHMP4CQ96CF2 AC007215.1-201ENST00000464893 276 ntBASIC3.03□□□□□ -1.92
CHMP4CQ96CF2 AP000870.1-201ENST00000472927 406 ntBASIC3.03□□□□□ -1.92
CHMP4CQ96CF2 AC132942.1-201ENST00000486753 483 ntBASIC3.03□□□□□ -1.92
CHMP4CQ96CF2 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.03□□□□□ -1.92
CHMP4CQ96CF2 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.03□□□□□ -1.92
CHMP4CQ96CF2 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.03□□□□□ -1.92
CHMP4CQ96CF2 AC018630.3-201ENST00000542637 96 ntBASIC3.03□□□□□ -1.92
CHMP4CQ96CF2 AC027288.2-201ENST00000553028 243 ntBASIC3.03□□□□□ -1.92
CHMP4CQ96CF2 SNRPGP20-201ENST00000604477 205 ntBASIC3.03□□□□□ -1.92
CHMP4CQ96CF2 MIR1302-2-201ENST00000607096 138 ntBASIC3.03□□□□□ -1.92
CHMP4CQ96CF2 uc_338.22-201ENST00000622722 187 ntBASIC3.03□□□□□ -1.92
CHMP4CQ96CF2 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
CHMP4CQ96CF2 ZNF204P-201ENST00000416749 2397 ntBASIC3.03□□□□□ -1.92
CHMP4CQ96CF2 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.03□□□□□ -1.93
CHMP4CQ96CF2 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
CHMP4CQ96CF2 AC135776.4-201ENST00000624300 1904 ntBASIC3.02□□□□□ -1.93
CHMP4CQ96CF2 RNA5SP289-201ENST00000362332 137 ntBASIC3.02□□□□□ -1.93
CHMP4CQ96CF2 Y_RNA.5-201ENST00000362334 102 ntBASIC3.02□□□□□ -1.93
CHMP4CQ96CF2 RNU6-222P-201ENST00000362438 107 ntBASIC3.02□□□□□ -1.93
CHMP4CQ96CF2 RNU1-23P-201ENST00000363361 144 ntBASIC3.02□□□□□ -1.93
CHMP4CQ96CF2 Y_RNA.138-201ENST00000363462 102 ntBASIC3.02□□□□□ -1.93
CHMP4CQ96CF2 Y_RNA.358-201ENST00000365491 99 ntBASIC3.02□□□□□ -1.93
CHMP4CQ96CF2 RNU6-26P-201ENST00000383985 107 ntBASIC3.02□□□□□ -1.93
CHMP4CQ96CF2 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
CHMP4CQ96CF2 AC027124.2-201ENST00000428249 105 ntBASIC3.02□□□□□ -1.93
CHMP4CQ96CF2 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.02□□□□□ -1.93
CHMP4CQ96CF2 AL035666.1-201ENST00000446195 348 ntBASIC3.02□□□□□ -1.93
CHMP4CQ96CF2 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.02□□□□□ -1.93
CHMP4CQ96CF2 RNA5SP320-201ENST00000516263 124 ntBASIC3.02□□□□□ -1.93
CHMP4CQ96CF2 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.02□□□□□ -1.93
CHMP4CQ96CF2 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.02□□□□□ -1.93
CHMP4CQ96CF2 RPL17P51-201ENST00000605218 238 ntBASIC3.02□□□□□ -1.93
CHMP4CQ96CF2 AC005562.2-201ENST00000618264 111 ntBASIC3.02□□□□□ -1.93
CHMP4CQ96CF2 U4atac.1-201ENST00000618345 95 ntBASIC3.02□□□□□ -1.93
CHMP4CQ96CF2 MIR203B-201ENST00000636080 86 ntBASIC3.02□□□□□ -1.93
CHMP4CQ96CF2 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC3.02□□□□□ -1.93
CHMP4CQ96CF2 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.02□□□□□ -1.93
CHMP4CQ96CF2 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.01□□□□□ -1.93
CHMP4CQ96CF2 MIR6073-201ENST00000352083 89 ntBASIC3.01□□□□□ -1.93
CHMP4CQ96CF2 RNU6-874P-201ENST00000362390 105 ntBASIC3.01□□□□□ -1.93
CHMP4CQ96CF2 RNU5F-3P-201ENST00000363767 117 ntBASIC3.01□□□□□ -1.93
CHMP4CQ96CF2 RNU6-280P-201ENST00000364145 104 ntBASIC3.01□□□□□ -1.93
CHMP4CQ96CF2 SNORA18.2-201ENST00000383865 132 ntBASIC3.01□□□□□ -1.93
CHMP4CQ96CF2 MIR548P-201ENST00000408336 84 ntBASIC3.01□□□□□ -1.93
CHMP4CQ96CF2 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.01□□□□□ -1.93
CHMP4CQ96CF2 AC114482.1-201ENST00000418010 247 ntBASIC3.01□□□□□ -1.93
CHMP4CQ96CF2 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.01□□□□□ -1.93
CHMP4CQ96CF2 AL137792.2-201ENST00000443484 235 ntBASIC3.01□□□□□ -1.93
CHMP4CQ96CF2 RNU7-169P-201ENST00000459456 61 ntBASIC3.01□□□□□ -1.93
CHMP4CQ96CF2 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.01□□□□□ -1.93
CHMP4CQ96CF2 RNU6-1114P-201ENST00000516022 107 ntBASIC3.01□□□□□ -1.93
CHMP4CQ96CF2 RNU6-965P-201ENST00000516721 96 ntBASIC3.01□□□□□ -1.93
CHMP4CQ96CF2 RNU6-1153P-201ENST00000516760 105 ntBASIC3.01□□□□□ -1.93
CHMP4CQ96CF2 AC023442.1-201ENST00000531247 422 ntBASIC3.01□□□□□ -1.93
CHMP4CQ96CF2 AC022616.8-201ENST00000533569 253 ntBASIC3.01□□□□□ -1.93
CHMP4CQ96CF2 AC090617.3-201ENST00000573670 475 ntBASIC3.01□□□□□ -1.93
CHMP4CQ96CF2 BX322639.1-202ENST00000423987 2213 ntBASIC3.01□□□□□ -1.93
CHMP4CQ96CF2 Y_RNA.39-201ENST00000362620 98 ntBASIC3□□□□□ -1.93
CHMP4CQ96CF2 DEFA7P-201ENST00000382676 285 ntBASIC3□□□□□ -1.93
CHMP4CQ96CF2 RNU6-1011P-201ENST00000384668 107 ntBASIC3□□□□□ -1.93
CHMP4CQ96CF2 MIR628-201ENST00000385229 95 ntBASIC3□□□□□ -1.93
CHMP4CQ96CF2 MIR549A-201ENST00000385268 96 ntBASIC3□□□□□ -1.93
CHMP4CQ96CF2 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3□□□□□ -1.93
CHMP4CQ96CF2 AC005534.2-201ENST00000431047 433 ntBASIC3□□□□□ -1.93
CHMP4CQ96CF2 AL445305.1-201ENST00000432577 575 ntBASIC3□□□□□ -1.93
CHMP4CQ96CF2 AC009238.1-201ENST00000442165 424 ntBASIC3□□□□□ -1.93
CHMP4CQ96CF2 AC009237.6-201ENST00000446969 424 ntBASIC3□□□□□ -1.93
CHMP4CQ96CF2 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3□□□□□ -1.93
CHMP4CQ96CF2 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3□□□□□ -1.93
CHMP4CQ96CF2 MIR5695-201ENST00000579717 85 ntBASIC3□□□□□ -1.93
CHMP4CQ96CF2 AC092447.9-201ENST00000603395 144 ntBASIC3□□□□□ -1.93
CHMP4CQ96CF2 AC006157.1-201ENST00000611750 366 ntBASIC3□□□□□ -1.93
CHMP4CQ96CF2 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3□□□□□ -1.93
CHMP4CQ96CF2 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CHMP4CQ96CF2 RNA5SP456-201ENST00000364002 114 ntBASIC2.99□□□□□ -1.93
CHMP4CQ96CF2 RNU1-115P-201ENST00000365329 160 ntBASIC2.99□□□□□ -1.93
CHMP4CQ96CF2 RNU6-474P-201ENST00000384243 107 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms