Protein–RNA interactions for Protein: Q969G2

LHX4, LIM/homeobox protein Lhx4, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX4Q969G2 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.67□□□□□ -2.14
LHX4Q969G2 CYP2C61P-201ENST00000604072 290 ntBASIC1.67□□□□□ -2.14
LHX4Q969G2 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.67□□□□□ -2.14
LHX4Q969G2 AC007014.2-201ENST00000615581 479 ntBASIC1.67□□□□□ -2.14
LHX4Q969G2 MIR7843-201ENST00000622274 79 ntBASIC1.67□□□□□ -2.14
LHX4Q969G2 AC027514.1-201ENST00000588561 1603 ntBASIC1.66□□□□□ -2.14
LHX4Q969G2 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
LHX4Q969G2 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
LHX4Q969G2 MIR1289-2-201ENST00000408360 111 ntBASIC1.66□□□□□ -2.14
LHX4Q969G2 AL358453.1-201ENST00000422522 250 ntBASIC1.66□□□□□ -2.14
LHX4Q969G2 AC139712.2-201ENST00000424302 339 ntBASIC1.66□□□□□ -2.14
LHX4Q969G2 AC027124.2-201ENST00000428249 105 ntBASIC1.66□□□□□ -2.14
LHX4Q969G2 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.66□□□□□ -2.14
LHX4Q969G2 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.66□□□□□ -2.14
LHX4Q969G2 AC087477.1-201ENST00000465747 340 ntBASIC1.66□□□□□ -2.14
LHX4Q969G2 RPL23AP75-201ENST00000491601 451 ntBASIC1.66□□□□□ -2.14
LHX4Q969G2 HMGB3P17-201ENST00000504195 649 ntBASIC1.66□□□□□ -2.14
LHX4Q969G2 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.66□□□□□ -2.14
LHX4Q969G2 AC026470.2-201ENST00000561492 181 ntBASIC1.66□□□□□ -2.14
LHX4Q969G2 AC022254.1-201ENST00000567857 235 ntBASIC1.66□□□□□ -2.14
LHX4Q969G2 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.66□□□□□ -2.14
LHX4Q969G2 POLR3GP2-201ENST00000588366 668 ntBASIC1.66□□□□□ -2.14
LHX4Q969G2 AC009318.2-201ENST00000610917 651 ntBASIC1.66□□□□□ -2.14
LHX4Q969G2 AC005562.2-201ENST00000618264 111 ntBASIC1.66□□□□□ -2.14
LHX4Q969G2 AC098679.4-201ENST00000624241 654 ntBASIC1.66□□□□□ -2.14
LHX4Q969G2 SCARNA4-201ENST00000629045 128 ntBASIC1.66□□□□□ -2.14
LHX4Q969G2 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.66□□□□□ -2.14
LHX4Q969G2 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.66□□□□□ -2.14
LHX4Q969G2 RNU6-1026P-201ENST00000384465 108 ntBASIC1.65□□□□□ -2.15
LHX4Q969G2 SUMO2P12-201ENST00000405924 140 ntBASIC1.65□□□□□ -2.15
LHX4Q969G2 AL139156.1-201ENST00000412785 841 ntBASIC1.65□□□□□ -2.15
LHX4Q969G2 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.65□□□□□ -2.15
LHX4Q969G2 RNU2-44P-201ENST00000516795 194 ntBASIC1.65□□□□□ -2.15
LHX4Q969G2 RNU6-1088P-201ENST00000516850 104 ntBASIC1.65□□□□□ -2.15
LHX4Q969G2 RNU6-273P-201ENST00000516937 96 ntBASIC1.65□□□□□ -2.15
LHX4Q969G2 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.65□□□□□ -2.15
LHX4Q969G2 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.65□□□□□ -2.15
LHX4Q969G2 AC080078.2-201ENST00000603766 501 ntBASIC1.65□□□□□ -2.15
LHX4Q969G2 AP000907.4-201ENST00000604143 237 ntBASIC1.65□□□□□ -2.15
LHX4Q969G2 AC124303.1-201ENST00000605703 360 ntBASIC1.65□□□□□ -2.15
LHX4Q969G2 AC019193.3-201ENST00000609144 554 ntBASIC1.65□□□□□ -2.15
LHX4Q969G2 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.65□□□□□ -2.15
LHX4Q969G2 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.65□□□□□ -2.15
LHX4Q969G2 AC002553.4-201ENST00000616896 331 ntBASIC1.65□□□□□ -2.15
LHX4Q969G2 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
LHX4Q969G2 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.64□□□□□ -2.15
LHX4Q969G2 SNORA48.1-201ENST00000390879 135 ntBASIC1.64□□□□□ -2.15
LHX4Q969G2 AC019129.1-201ENST00000403786 261 ntBASIC1.64□□□□□ -2.15
LHX4Q969G2 MTND4LP16-201ENST00000440828 295 ntBASIC1.64□□□□□ -2.15
LHX4Q969G2 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.64□□□□□ -2.15
LHX4Q969G2 AC007215.1-201ENST00000464893 276 ntBASIC1.64□□□□□ -2.15
LHX4Q969G2 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
LHX4Q969G2 ACA59.1-201ENST00000515966 143 ntBASIC1.64□□□□□ -2.15
LHX4Q969G2 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.64□□□□□ -2.15
LHX4Q969G2 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.64□□□□□ -2.15
LHX4Q969G2 AC018638.8-201ENST00000588755 281 ntBASIC1.64□□□□□ -2.15
LHX4Q969G2 AC137590.2-201ENST00000619709 240 ntBASIC1.64□□□□□ -2.15
LHX4Q969G2 AC022513.1-201ENST00000624512 117 ntBASIC1.64□□□□□ -2.15
LHX4Q969G2 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.64□□□□□ -2.15
LHX4Q969G2 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.64□□□□□ -2.15
LHX4Q969G2 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.64□□□□□ -2.15
LHX4Q969G2 CBX3P1-201ENST00000325243 554 ntBASIC1.63□□□□□ -2.15
LHX4Q969G2 RNU6-1013P-201ENST00000384180 107 ntBASIC1.63□□□□□ -2.15
LHX4Q969G2 U8.10-201ENST00000384260 133 ntBASIC1.63□□□□□ -2.15
LHX4Q969G2 RNU6-306P-201ENST00000384617 107 ntBASIC1.63□□□□□ -2.15
LHX4Q969G2 MIR549A-201ENST00000385268 96 ntBASIC1.63□□□□□ -2.15
LHX4Q969G2 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
LHX4Q969G2 AL445685.2-201ENST00000422551 342 ntBASIC1.63□□□□□ -2.15
LHX4Q969G2 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.63□□□□□ -2.15
LHX4Q969G2 AC004386.2-201ENST00000441858 148 ntBASIC1.63□□□□□ -2.15
LHX4Q969G2 MTCO1P44-201ENST00000441935 243 ntBASIC1.63□□□□□ -2.15
LHX4Q969G2 MTND1P17-201ENST00000448961 204 ntBASIC1.63□□□□□ -2.15
LHX4Q969G2 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.63□□□□□ -2.15
LHX4Q969G2 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.63□□□□□ -2.15
LHX4Q969G2 AC010531.2-201ENST00000465012 153 ntBASIC1.63□□□□□ -2.15
LHX4Q969G2 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.63□□□□□ -2.15
LHX4Q969G2 RNU4-49P-201ENST00000516080 140 ntBASIC1.63□□□□□ -2.15
LHX4Q969G2 RNVU1-2-201ENST00000516326 135 ntBASIC1.63□□□□□ -2.15
LHX4Q969G2 RNA5SP454-201ENST00000517231 127 ntBASIC1.63□□□□□ -2.15
LHX4Q969G2 GNAI2P1-201ENST00000541815 315 ntBASIC1.63□□□□□ -2.15
LHX4Q969G2 AC005786.1-201ENST00000588553 154 ntBASIC1.63□□□□□ -2.15
LHX4Q969G2 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.63□□□□□ -2.15
LHX4Q969G2 RMST_6.1-201ENST00000611980 203 ntBASIC1.63□□□□□ -2.15
LHX4Q969G2 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.63□□□□□ -2.15
LHX4Q969G2 TCL6_2.1-201ENST00000615162 119 ntBASIC1.63□□□□□ -2.15
LHX4Q969G2 AL359757.2-201ENST00000624309 274 ntBASIC1.63□□□□□ -2.15
LHX4Q969G2 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.63□□□□□ -2.15
LHX4Q969G2 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
LHX4Q969G2 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
LHX4Q969G2 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
LHX4Q969G2 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.62□□□□□ -2.15
LHX4Q969G2 RNU6-545P-201ENST00000362681 104 ntBASIC1.62□□□□□ -2.15
LHX4Q969G2 Y_RNA.86-201ENST00000363020 111 ntBASIC1.62□□□□□ -2.15
LHX4Q969G2 Y_RNA.301-201ENST00000364990 103 ntBASIC1.62□□□□□ -2.15
LHX4Q969G2 MIR487A-201ENST00000385009 80 ntBASIC1.62□□□□□ -2.15
LHX4Q969G2 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.62□□□□□ -2.15
LHX4Q969G2 RNU2-2P-201ENST00000410396 191 ntBASIC1.62□□□□□ -2.15
LHX4Q969G2 AC004866.1-201ENST00000411748 78 ntBASIC1.62□□□□□ -2.15
LHX4Q969G2 AC009310.1-201ENST00000414414 451 ntBASIC1.62□□□□□ -2.15
LHX4Q969G2 RPL31P63-201ENST00000422565 375 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 163 ms