Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC069439.1-201ENST00000494739 167 ntBASIC1.25□□□□□ -2.21
SHROOM3Q8TF72 SNORA40.12-201ENST00000516329 111 ntBASIC1.25□□□□□ -2.21
SHROOM3Q8TF72 RNU6-567P-201ENST00000516746 107 ntBASIC1.25□□□□□ -2.21
SHROOM3Q8TF72 MTND1P5-201ENST00000517906 940 ntBASIC1.25□□□□□ -2.21
SHROOM3Q8TF72 AC025423.5-201ENST00000550230 219 ntBASIC1.25□□□□□ -2.21
SHROOM3Q8TF72 MTCO3P23-201ENST00000561363 289 ntBASIC1.25□□□□□ -2.21
SHROOM3Q8TF72 EIF1P4-201ENST00000572664 335 ntBASIC1.25□□□□□ -2.21
SHROOM3Q8TF72 FAM157A-202ENST00000615155 405 ntBASIC1.25□□□□□ -2.21
SHROOM3Q8TF72 uc_338.15-201ENST00000615470 191 ntBASIC1.25□□□□□ -2.21
SHROOM3Q8TF72 AC090517.3-201ENST00000625170 141 ntBASIC1.25□□□□□ -2.21
SHROOM3Q8TF72 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.25□□□□□ -2.21
SHROOM3Q8TF72 RNU1-72P-201ENST00000362976 153 ntBASIC1.25□□□□□ -2.21
SHROOM3Q8TF72 Y_RNA.100-201ENST00000363141 102 ntBASIC1.25□□□□□ -2.21
SHROOM3Q8TF72 RNY4P14-201ENST00000363656 96 ntBASIC1.25□□□□□ -2.21
SHROOM3Q8TF72 MIR517A-201ENST00000385001 87 ntBASIC1.25□□□□□ -2.21
SHROOM3Q8TF72 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
SHROOM3Q8TF72 RN7SKP158-201ENST00000410453 326 ntBASIC1.25□□□□□ -2.21
SHROOM3Q8TF72 RNU2-63P-201ENST00000410792 194 ntBASIC1.25□□□□□ -2.21
SHROOM3Q8TF72 RNU6-325P-201ENST00000411132 105 ntBASIC1.25□□□□□ -2.21
SHROOM3Q8TF72 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.25□□□□□ -2.21
SHROOM3Q8TF72 EIF4EP4-201ENST00000424916 578 ntBASIC1.25□□□□□ -2.21
SHROOM3Q8TF72 MTCO3P46-201ENST00000425787 232 ntBASIC1.25□□□□□ -2.21
SHROOM3Q8TF72 RPS29P28-201ENST00000446439 141 ntBASIC1.25□□□□□ -2.21
SHROOM3Q8TF72 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.25□□□□□ -2.21
SHROOM3Q8TF72 RNU7-167P-201ENST00000459160 62 ntBASIC1.25□□□□□ -2.21
SHROOM3Q8TF72 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.25□□□□□ -2.21
SHROOM3Q8TF72 RNU4-49P-201ENST00000516080 140 ntBASIC1.25□□□□□ -2.21
SHROOM3Q8TF72 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.25□□□□□ -2.21
SHROOM3Q8TF72 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.25□□□□□ -2.21
SHROOM3Q8TF72 CPDP1-201ENST00000579660 283 ntBASIC1.25□□□□□ -2.21
SHROOM3Q8TF72 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.25□□□□□ -2.21
SHROOM3Q8TF72 AC103705.1-201ENST00000619013 241 ntBASIC1.25□□□□□ -2.21
SHROOM3Q8TF72 MIR5739-201ENST00000619803 80 ntBASIC1.25□□□□□ -2.21
SHROOM3Q8TF72 RNU6-486P-201ENST00000363116 107 ntBASIC1.24□□□□□ -2.21
SHROOM3Q8TF72 RNU4-20P-201ENST00000365601 151 ntBASIC1.24□□□□□ -2.21
SHROOM3Q8TF72 RNU6-692P-201ENST00000384496 107 ntBASIC1.24□□□□□ -2.21
SHROOM3Q8TF72 MIR222-201ENST00000384992 110 ntBASIC1.24□□□□□ -2.21
SHROOM3Q8TF72 RNU1-139P-201ENST00000391307 165 ntBASIC1.24□□□□□ -2.21
SHROOM3Q8TF72 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
SHROOM3Q8TF72 C8orf59P1-201ENST00000429930 303 ntBASIC1.24□□□□□ -2.21
SHROOM3Q8TF72 AC007969.2-201ENST00000441891 191 ntBASIC1.24□□□□□ -2.21
SHROOM3Q8TF72 RNU6-1037P-201ENST00000459571 107 ntBASIC1.24□□□□□ -2.21
SHROOM3Q8TF72 RPL9P9-202ENST00000466501 579 ntBASIC1.24□□□□□ -2.21
SHROOM3Q8TF72 AC021146.2-201ENST00000504736 556 ntBASIC1.24□□□□□ -2.21
SHROOM3Q8TF72 AC025465.4-201ENST00000513422 638 ntBASIC1.24□□□□□ -2.21
SHROOM3Q8TF72 RN7SKP256-201ENST00000517201 314 ntBASIC1.24□□□□□ -2.21
SHROOM3Q8TF72 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.24□□□□□ -2.21
SHROOM3Q8TF72 BNIP3P25-201ENST00000596023 559 ntBASIC1.24□□□□□ -2.21
SHROOM3Q8TF72 AL096840.1-201ENST00000603287 93 ntBASIC1.24□□□□□ -2.21
SHROOM3Q8TF72 AL357078.3-201ENST00000607528 618 ntBASIC1.24□□□□□ -2.21
SHROOM3Q8TF72 AC090517.2-201ENST00000614966 680 ntBASIC1.24□□□□□ -2.21
SHROOM3Q8TF72 SNORD98-201ENST00000636377 67 ntBASIC1.24□□□□□ -2.21
SHROOM3Q8TF72 RNU6-1010P-201ENST00000362757 107 ntBASIC1.23□□□□□ -2.21
SHROOM3Q8TF72 Y_RNA.157-201ENST00000363638 102 ntBASIC1.23□□□□□ -2.21
SHROOM3Q8TF72 SNORD32A-201ENST00000364805 84 ntBASIC1.23□□□□□ -2.21
SHROOM3Q8TF72 RNU6-38P-201ENST00000384085 107 ntBASIC1.23□□□□□ -2.21
SHROOM3Q8TF72 Y_RNA.505-201ENST00000384489 102 ntBASIC1.23□□□□□ -2.21
SHROOM3Q8TF72 EIF4E2P1-201ENST00000393781 255 ntBASIC1.23□□□□□ -2.21
SHROOM3Q8TF72 RNA5SP390-201ENST00000410191 113 ntBASIC1.23□□□□□ -2.21
SHROOM3Q8TF72 Y_RNA.597-201ENST00000410463 100 ntBASIC1.23□□□□□ -2.21
SHROOM3Q8TF72 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.23□□□□□ -2.21
SHROOM3Q8TF72 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.23□□□□□ -2.21
SHROOM3Q8TF72 MTND1P34-201ENST00000438556 671 ntBASIC1.23□□□□□ -2.21
SHROOM3Q8TF72 MTCO2P3-201ENST00000442543 421 ntBASIC1.23□□□□□ -2.21
SHROOM3Q8TF72 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.23□□□□□ -2.21
SHROOM3Q8TF72 RNU6-333P-201ENST00000459117 107 ntBASIC1.23□□□□□ -2.21
SHROOM3Q8TF72 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.23□□□□□ -2.21
SHROOM3Q8TF72 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.23□□□□□ -2.21
SHROOM3Q8TF72 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.23□□□□□ -2.21
SHROOM3Q8TF72 AK3P2-201ENST00000507976 429 ntBASIC1.23□□□□□ -2.21
SHROOM3Q8TF72 RNA5SP436-201ENST00000516020 115 ntBASIC1.23□□□□□ -2.21
SHROOM3Q8TF72 RNU2-53P-201ENST00000516257 147 ntBASIC1.23□□□□□ -2.21
SHROOM3Q8TF72 RNU6-566P-201ENST00000516790 107 ntBASIC1.23□□□□□ -2.21
SHROOM3Q8TF72 RNU2-44P-201ENST00000516795 194 ntBASIC1.23□□□□□ -2.21
SHROOM3Q8TF72 AP005902.1-201ENST00000521358 186 ntBASIC1.23□□□□□ -2.21
SHROOM3Q8TF72 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.23□□□□□ -2.21
SHROOM3Q8TF72 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.23□□□□□ -2.21
SHROOM3Q8TF72 AC146944.4-201ENST00000602697 718 ntBASIC1.23□□□□□ -2.21
SHROOM3Q8TF72 AL136221.1-201ENST00000621449 509 ntBASIC1.23□□□□□ -2.21
SHROOM3Q8TF72 AC121333.1-201ENST00000567488 2709 ntBASIC1.23□□□□□ -2.21
SHROOM3Q8TF72 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.23□□□□□ -2.21
SHROOM3Q8TF72 RNU6-1141P-201ENST00000364520 107 ntBASIC1.23□□□□□ -2.21
SHROOM3Q8TF72 MIR520E-201ENST00000384867 87 ntBASIC1.23□□□□□ -2.21
SHROOM3Q8TF72 SNORD115-47-201ENST00000391226 86 ntBASIC1.23□□□□□ -2.21
SHROOM3Q8TF72 CBX3P9-201ENST00000402326 552 ntBASIC1.23□□□□□ -2.21
SHROOM3Q8TF72 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.23□□□□□ -2.21
SHROOM3Q8TF72 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.23□□□□□ -2.21
SHROOM3Q8TF72 AC006026.2-201ENST00000457376 180 ntBASIC1.23□□□□□ -2.21
SHROOM3Q8TF72 snoU13.14-201ENST00000459372 104 ntBASIC1.23□□□□□ -2.21
SHROOM3Q8TF72 RPS29P27-201ENST00000463711 170 ntBASIC1.23□□□□□ -2.21
SHROOM3Q8TF72 SNORA31.25-201ENST00000517242 134 ntBASIC1.23□□□□□ -2.21
SHROOM3Q8TF72 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.23□□□□□ -2.21
SHROOM3Q8TF72 AC109446.1-201ENST00000566172 220 ntBASIC1.23□□□□□ -2.21
SHROOM3Q8TF72 AC091135.1-201ENST00000585943 307 ntBASIC1.23□□□□□ -2.21
SHROOM3Q8TF72 AP003465.2-201ENST00000602571 373 ntBASIC1.23□□□□□ -2.21
SHROOM3Q8TF72 AC073410.2-201ENST00000603240 332 ntBASIC1.23□□□□□ -2.21
SHROOM3Q8TF72 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.23□□□□□ -2.21
SHROOM3Q8TF72 AC010487.4-201ENST00000637027 61 ntBASIC1.23□□□□□ -2.21
SHROOM3Q8TF72 RNU6-336P-201ENST00000364891 107 ntBASIC1.22□□□□□ -2.21
SHROOM3Q8TF72 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms