Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 RNA5SP404-201ENST00000517118 132 ntBASIC0.82□□□□□ -2.28
ZIC4Q8N9L1 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.82□□□□□ -2.28
ZIC4Q8N9L1 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.82□□□□□ -2.28
ZIC4Q8N9L1 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.82□□□□□ -2.28
ZIC4Q8N9L1 AC026470.2-201ENST00000561492 181 ntBASIC0.82□□□□□ -2.28
ZIC4Q8N9L1 AC064872.1-201ENST00000604823 1072 ntBASIC0.82□□□□□ -2.28
ZIC4Q8N9L1 AC005562.2-201ENST00000618264 111 ntBASIC0.82□□□□□ -2.28
ZIC4Q8N9L1 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.82□□□□□ -2.28
ZIC4Q8N9L1 AC009541.1-201ENST00000438279 2662 ntBASIC0.81□□□□□ -2.28
ZIC4Q8N9L1 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
ZIC4Q8N9L1 MIR373-201ENST00000362273 69 ntBASIC0.81□□□□□ -2.28
ZIC4Q8N9L1 RNU6-1187P-201ENST00000364771 110 ntBASIC0.81□□□□□ -2.28
ZIC4Q8N9L1 RNU6-968P-201ENST00000384076 107 ntBASIC0.81□□□□□ -2.28
ZIC4Q8N9L1 RNU6-1235P-201ENST00000384559 107 ntBASIC0.81□□□□□ -2.28
ZIC4Q8N9L1 RNU6-950P-201ENST00000384651 107 ntBASIC0.81□□□□□ -2.28
ZIC4Q8N9L1 MIR532-201ENST00000385025 91 ntBASIC0.81□□□□□ -2.28
ZIC4Q8N9L1 FGFR1OP2P1-201ENST00000395943 500 ntBASIC0.81□□□□□ -2.28
ZIC4Q8N9L1 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.81□□□□□ -2.28
ZIC4Q8N9L1 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.81□□□□□ -2.28
ZIC4Q8N9L1 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC0.81□□□□□ -2.28
ZIC4Q8N9L1 OFD1P4Y-201ENST00000455273 1179 ntBASIC0.81□□□□□ -2.28
ZIC4Q8N9L1 RNU7-167P-201ENST00000459160 62 ntBASIC0.81□□□□□ -2.28
ZIC4Q8N9L1 RNU6-498P-201ENST00000459468 107 ntBASIC0.81□□□□□ -2.28
ZIC4Q8N9L1 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.81□□□□□ -2.28
ZIC4Q8N9L1 RN7SKP265-201ENST00000516448 223 ntBASIC0.81□□□□□ -2.28
ZIC4Q8N9L1 MIR3664-201ENST00000579074 99 ntBASIC0.81□□□□□ -2.28
ZIC4Q8N9L1 AC234772.3-201ENST00000602277 528 ntBASIC0.81□□□□□ -2.28
ZIC4Q8N9L1 HSPE1P19-201ENST00000603327 295 ntBASIC0.81□□□□□ -2.28
ZIC4Q8N9L1 RNU6-85P-201ENST00000605989 107 ntBASIC0.81□□□□□ -2.28
ZIC4Q8N9L1 AC004492.1-201ENST00000607036 742 ntBASIC0.81□□□□□ -2.28
ZIC4Q8N9L1 U2.17-201ENST00000611454 95 ntBASIC0.81□□□□□ -2.28
ZIC4Q8N9L1 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.81□□□□□ -2.28
ZIC4Q8N9L1 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
ZIC4Q8N9L1 snoU2-30.2-201ENST00000362805 70 ntBASIC0.8□□□□□ -2.28
ZIC4Q8N9L1 RNU1-93P-201ENST00000364704 169 ntBASIC0.8□□□□□ -2.28
ZIC4Q8N9L1 SNORA4.2-201ENST00000365313 147 ntBASIC0.8□□□□□ -2.28
ZIC4Q8N9L1 SNORA25-201ENST00000384384 134 ntBASIC0.8□□□□□ -2.28
ZIC4Q8N9L1 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.8□□□□□ -2.28
ZIC4Q8N9L1 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.8□□□□□ -2.28
ZIC4Q8N9L1 AC133104.1-201ENST00000429100 218 ntBASIC0.8□□□□□ -2.28
ZIC4Q8N9L1 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC0.8□□□□□ -2.28
ZIC4Q8N9L1 MTCO2P3-201ENST00000442543 421 ntBASIC0.8□□□□□ -2.28
ZIC4Q8N9L1 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.8□□□□□ -2.28
ZIC4Q8N9L1 AC074290.1-201ENST00000448883 135 ntBASIC0.8□□□□□ -2.28
ZIC4Q8N9L1 SNRPFP3-201ENST00000457792 225 ntBASIC0.8□□□□□ -2.28
ZIC4Q8N9L1 HMGN1P12-201ENST00000499125 195 ntBASIC0.8□□□□□ -2.28
ZIC4Q8N9L1 RNU6-232P-201ENST00000517144 64 ntBASIC0.8□□□□□ -2.28
ZIC4Q8N9L1 CENPUP1-201ENST00000526649 1202 ntBASIC0.8□□□□□ -2.28
ZIC4Q8N9L1 AP002963.1-201ENST00000530590 184 ntBASIC0.8□□□□□ -2.28
ZIC4Q8N9L1 AL442163.3-201ENST00000554110 156 ntBASIC0.8□□□□□ -2.28
ZIC4Q8N9L1 MIR3973-201ENST00000579824 107 ntBASIC0.8□□□□□ -2.28
ZIC4Q8N9L1 AL391646.1-201ENST00000603860 190 ntBASIC0.8□□□□□ -2.28
ZIC4Q8N9L1 BX284668.6-201ENST00000606899 438 ntBASIC0.8□□□□□ -2.28
ZIC4Q8N9L1 AC104458.1-201ENST00000608243 463 ntBASIC0.8□□□□□ -2.28
ZIC4Q8N9L1 MIR8070-201ENST00000616510 88 ntBASIC0.8□□□□□ -2.28
ZIC4Q8N9L1 AC012676.2-201ENST00000619258 186 ntBASIC0.8□□□□□ -2.28
ZIC4Q8N9L1 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.8□□□□□ -2.28
ZIC4Q8N9L1 AF246928.1-201ENST00000623768 87 ntBASIC0.8□□□□□ -2.28
ZIC4Q8N9L1 SNORA25.9-201ENST00000365087 128 ntBASIC0.79□□□□□ -2.28
ZIC4Q8N9L1 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
ZIC4Q8N9L1 AC010099.3-201ENST00000423896 409 ntBASIC0.79□□□□□ -2.28
ZIC4Q8N9L1 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC0.79□□□□□ -2.28
ZIC4Q8N9L1 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.79□□□□□ -2.28
ZIC4Q8N9L1 HSPE1P13-201ENST00000451143 297 ntBASIC0.79□□□□□ -2.28
ZIC4Q8N9L1 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.79□□□□□ -2.28
ZIC4Q8N9L1 AC105417.1-201ENST00000514691 285 ntBASIC0.79□□□□□ -2.28
ZIC4Q8N9L1 RNU6-113P-201ENST00000516653 101 ntBASIC0.79□□□□□ -2.28
ZIC4Q8N9L1 SNORA18.6-201ENST00000516792 115 ntBASIC0.79□□□□□ -2.28
ZIC4Q8N9L1 DEFB131C-201ENST00000528817 165 ntBASIC0.79□□□□□ -2.28
ZIC4Q8N9L1 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.79□□□□□ -2.28
ZIC4Q8N9L1 AC008015.1-201ENST00000555505 465 ntBASIC0.79□□□□□ -2.28
ZIC4Q8N9L1 MIR6857-201ENST00000613267 93 ntBASIC0.79□□□□□ -2.28
ZIC4Q8N9L1 AC079248.2-201ENST00000623779 326 ntBASIC0.79□□□□□ -2.28
ZIC4Q8N9L1 AC009161.2-201ENST00000624626 138 ntBASIC0.79□□□□□ -2.28
ZIC4Q8N9L1 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
ZIC4Q8N9L1 AC068700.1-201ENST00000565862 3754 ntBASIC0.78□□□□□ -2.28
ZIC4Q8N9L1 RNU1-124P-201ENST00000363861 145 ntBASIC0.78□□□□□ -2.28
ZIC4Q8N9L1 RNU6-553P-201ENST00000364047 96 ntBASIC0.78□□□□□ -2.28
ZIC4Q8N9L1 RNU6-975P-201ENST00000384296 105 ntBASIC0.78□□□□□ -2.28
ZIC4Q8N9L1 RNU5A-2P-201ENST00000384337 116 ntBASIC0.78□□□□□ -2.28
ZIC4Q8N9L1 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.78□□□□□ -2.28
ZIC4Q8N9L1 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.78□□□□□ -2.28
ZIC4Q8N9L1 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.78□□□□□ -2.28
ZIC4Q8N9L1 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.78□□□□□ -2.28
ZIC4Q8N9L1 RNU7-125P-201ENST00000458760 62 ntBASIC0.78□□□□□ -2.28
ZIC4Q8N9L1 snoU13.6-201ENST00000458785 104 ntBASIC0.78□□□□□ -2.28
ZIC4Q8N9L1 SNORD42A-201ENST00000459584 64 ntBASIC0.78□□□□□ -2.28
ZIC4Q8N9L1 UBL5P1-201ENST00000507979 193 ntBASIC0.78□□□□□ -2.28
ZIC4Q8N9L1 SNORD116-28-201ENST00000516123 91 ntBASIC0.78□□□□□ -2.28
ZIC4Q8N9L1 AC024995.1-201ENST00000523014 93 ntBASIC0.78□□□□□ -2.28
ZIC4Q8N9L1 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
ZIC4Q8N9L1 AL137161.1-201ENST00000532231 390 ntBASIC0.78□□□□□ -2.28
ZIC4Q8N9L1 CBX3P8-201ENST00000532412 525 ntBASIC0.78□□□□□ -2.28
ZIC4Q8N9L1 AC009094.1-201ENST00000564443 426 ntBASIC0.78□□□□□ -2.28
ZIC4Q8N9L1 MIR5006-201ENST00000583027 110 ntBASIC0.78□□□□□ -2.28
ZIC4Q8N9L1 AL022345.2-201ENST00000606307 135 ntBASIC0.78□□□□□ -2.28
ZIC4Q8N9L1 AL136370.1-201ENST00000608166 691 ntBASIC0.78□□□□□ -2.28
ZIC4Q8N9L1 AC122133.1-201ENST00000613964 233 ntBASIC0.78□□□□□ -2.28
ZIC4Q8N9L1 TCL6_2.1-201ENST00000615162 119 ntBASIC0.78□□□□□ -2.28
ZIC4Q8N9L1 AC027335.2-201ENST00000624030 375 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms