Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 AC016957.1-201ENST00000534895 309 ntBASIC1.32□□□□□ -2.2
COL27A1Q8IZC6 IMMP1LP2-201ENST00000552954 492 ntBASIC1.32□□□□□ -2.2
COL27A1Q8IZC6 SNORA59B-202ENST00000578183 701 ntBASIC1.32□□□□□ -2.2
COL27A1Q8IZC6 CPDP1-201ENST00000579660 283 ntBASIC1.32□□□□□ -2.2
COL27A1Q8IZC6 MIR8076-201ENST00000611401 83 ntBASIC1.32□□□□□ -2.2
COL27A1Q8IZC6 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
COL27A1Q8IZC6 RNU6-655P-201ENST00000362858 107 ntBASIC1.31□□□□□ -2.2
COL27A1Q8IZC6 Y_RNA.151-201ENST00000363566 112 ntBASIC1.31□□□□□ -2.2
COL27A1Q8IZC6 Y_RNA.224-201ENST00000364308 111 ntBASIC1.31□□□□□ -2.2
COL27A1Q8IZC6 RNU6-784P-201ENST00000384330 106 ntBASIC1.31□□□□□ -2.2
COL27A1Q8IZC6 AL512604.1-201ENST00000404812 257 ntBASIC1.31□□□□□ -2.2
COL27A1Q8IZC6 AL357139.1-201ENST00000407792 426 ntBASIC1.31□□□□□ -2.2
COL27A1Q8IZC6 RNA5SP201-201ENST00000410316 124 ntBASIC1.31□□□□□ -2.2
COL27A1Q8IZC6 RNU2-32P-201ENST00000411193 191 ntBASIC1.31□□□□□ -2.2
COL27A1Q8IZC6 AL030996.1-201ENST00000411430 235 ntBASIC1.31□□□□□ -2.2
COL27A1Q8IZC6 MTCO3P46-201ENST00000425787 232 ntBASIC1.31□□□□□ -2.2
COL27A1Q8IZC6 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.31□□□□□ -2.2
COL27A1Q8IZC6 AL133396.1-201ENST00000432048 687 ntBASIC1.31□□□□□ -2.2
COL27A1Q8IZC6 AC009474.2-201ENST00000451383 136 ntBASIC1.31□□□□□ -2.2
COL27A1Q8IZC6 AC022447.4-201ENST00000504053 364 ntBASIC1.31□□□□□ -2.2
COL27A1Q8IZC6 AK3P2-201ENST00000507976 429 ntBASIC1.31□□□□□ -2.2
COL27A1Q8IZC6 AC092436.3-201ENST00000511788 257 ntBASIC1.31□□□□□ -2.2
COL27A1Q8IZC6 RNU6-358P-201ENST00000516564 75 ntBASIC1.31□□□□□ -2.2
COL27A1Q8IZC6 RN7SKP49-201ENST00000516675 260 ntBASIC1.31□□□□□ -2.2
COL27A1Q8IZC6 AC107953.1-201ENST00000522216 297 ntBASIC1.31□□□□□ -2.2
COL27A1Q8IZC6 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.31□□□□□ -2.2
COL27A1Q8IZC6 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.31□□□□□ -2.2
COL27A1Q8IZC6 AC091135.1-201ENST00000585943 307 ntBASIC1.31□□□□□ -2.2
COL27A1Q8IZC6 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.31□□□□□ -2.2
COL27A1Q8IZC6 AL031274.2-201ENST00000599419 203 ntBASIC1.31□□□□□ -2.2
COL27A1Q8IZC6 AC005520.5-201ENST00000613926 164 ntBASIC1.31□□□□□ -2.2
COL27A1Q8IZC6 AC090517.3-201ENST00000625170 141 ntBASIC1.31□□□□□ -2.2
COL27A1Q8IZC6 SNORD98-201ENST00000636377 67 ntBASIC1.31□□□□□ -2.2
COL27A1Q8IZC6 MIR3688-2-201ENST00000636963 87 ntBASIC1.31□□□□□ -2.2
COL27A1Q8IZC6 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
COL27A1Q8IZC6 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.31□□□□□ -2.2
COL27A1Q8IZC6 ZNF702P-202ENST00000434269 1966 ntBASIC1.31□□□□□ -2.2
COL27A1Q8IZC6 AP000560.1-201ENST00000624150 1937 ntBASIC1.31□□□□□ -2.2
COL27A1Q8IZC6 RNU6-212P-201ENST00000362642 104 ntBASIC1.31□□□□□ -2.2
COL27A1Q8IZC6 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.31□□□□□ -2.2
COL27A1Q8IZC6 MIR517A-201ENST00000385001 87 ntBASIC1.31□□□□□ -2.2
COL27A1Q8IZC6 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
COL27A1Q8IZC6 RNU2-48P-201ENST00000410694 191 ntBASIC1.31□□□□□ -2.2
COL27A1Q8IZC6 VN1R36P-201ENST00000414936 291 ntBASIC1.31□□□□□ -2.2
COL27A1Q8IZC6 NCOR1P3-201ENST00000420479 303 ntBASIC1.31□□□□□ -2.2
COL27A1Q8IZC6 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.31□□□□□ -2.2
COL27A1Q8IZC6 SNORD5.1-201ENST00000458800 75 ntBASIC1.31□□□□□ -2.2
COL27A1Q8IZC6 RNU6-329P-201ENST00000459618 107 ntBASIC1.31□□□□□ -2.2
COL27A1Q8IZC6 HMGB3P3-201ENST00000510526 400 ntBASIC1.31□□□□□ -2.2
COL27A1Q8IZC6 RNU5F-4P-201ENST00000516581 114 ntBASIC1.31□□□□□ -2.2
COL27A1Q8IZC6 RNU6-1088P-201ENST00000516850 104 ntBASIC1.31□□□□□ -2.2
COL27A1Q8IZC6 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.31□□□□□ -2.2
COL27A1Q8IZC6 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.31□□□□□ -2.2
COL27A1Q8IZC6 CYP4A27P-201ENST00000567218 190 ntBASIC1.31□□□□□ -2.2
COL27A1Q8IZC6 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.31□□□□□ -2.2
COL27A1Q8IZC6 AC005296.1-201ENST00000616145 209 ntBASIC1.31□□□□□ -2.2
COL27A1Q8IZC6 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.31□□□□□ -2.2
COL27A1Q8IZC6 RNU6-227P-201ENST00000362865 103 ntBASIC1.3□□□□□ -2.2
COL27A1Q8IZC6 RNU6-336P-201ENST00000364891 107 ntBASIC1.3□□□□□ -2.2
COL27A1Q8IZC6 SNORD114-22-201ENST00000365423 72 ntBASIC1.3□□□□□ -2.2
COL27A1Q8IZC6 Y_RNA.354-201ENST00000365448 111 ntBASIC1.3□□□□□ -2.2
COL27A1Q8IZC6 RNU4-20P-201ENST00000365601 151 ntBASIC1.3□□□□□ -2.2
COL27A1Q8IZC6 Y_RNA.414-201ENST00000384011 101 ntBASIC1.3□□□□□ -2.2
COL27A1Q8IZC6 SNORA32.2-201ENST00000384049 122 ntBASIC1.3□□□□□ -2.2
COL27A1Q8IZC6 RNA5SP219-201ENST00000390940 113 ntBASIC1.3□□□□□ -2.2
COL27A1Q8IZC6 SNORA26.3-201ENST00000391119 136 ntBASIC1.3□□□□□ -2.2
COL27A1Q8IZC6 MTATP6P13-201ENST00000438531 667 ntBASIC1.3□□□□□ -2.2
COL27A1Q8IZC6 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.3□□□□□ -2.2
COL27A1Q8IZC6 HMGN2P18-201ENST00000450680 270 ntBASIC1.3□□□□□ -2.2
COL27A1Q8IZC6 PRELID3BP1-201ENST00000457142 540 ntBASIC1.3□□□□□ -2.2
COL27A1Q8IZC6 RNU7-187P-201ENST00000458985 68 ntBASIC1.3□□□□□ -2.2
COL27A1Q8IZC6 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.3□□□□□ -2.2
COL27A1Q8IZC6 RNU6-256P-201ENST00000516747 97 ntBASIC1.3□□□□□ -2.2
COL27A1Q8IZC6 SNORA31.16-201ENST00000516773 139 ntBASIC1.3□□□□□ -2.2
COL27A1Q8IZC6 MTND4LP26-201ENST00000518144 282 ntBASIC1.3□□□□□ -2.2
COL27A1Q8IZC6 AF235103.2-201ENST00000525753 346 ntBASIC1.3□□□□□ -2.2
COL27A1Q8IZC6 AC018630.3-201ENST00000542637 96 ntBASIC1.3□□□□□ -2.2
COL27A1Q8IZC6 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.3□□□□□ -2.2
COL27A1Q8IZC6 TRAV32-201ENST00000553993 340 ntBASIC1.3□□□□□ -2.2
COL27A1Q8IZC6 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.3□□□□□ -2.2
COL27A1Q8IZC6 MIR5194-201ENST00000582634 120 ntBASIC1.3□□□□□ -2.2
COL27A1Q8IZC6 AC078795.3-201ENST00000602913 472 ntBASIC1.3□□□□□ -2.2
COL27A1Q8IZC6 AC073410.2-201ENST00000603240 332 ntBASIC1.3□□□□□ -2.2
COL27A1Q8IZC6 AP001836.1-201ENST00000604675 523 ntBASIC1.3□□□□□ -2.2
COL27A1Q8IZC6 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.3□□□□□ -2.2
COL27A1Q8IZC6 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
COL27A1Q8IZC6 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
COL27A1Q8IZC6 AC009541.1-201ENST00000438279 2662 ntBASIC1.29□□□□□ -2.2
COL27A1Q8IZC6 RNU6-845P-201ENST00000362578 103 ntBASIC1.29□□□□□ -2.2
COL27A1Q8IZC6 RNU6-234P-201ENST00000365229 104 ntBASIC1.29□□□□□ -2.2
COL27A1Q8IZC6 RN7SKP61-201ENST00000410642 295 ntBASIC1.29□□□□□ -2.2
COL27A1Q8IZC6 RNU6-325P-201ENST00000411132 105 ntBASIC1.29□□□□□ -2.2
COL27A1Q8IZC6 AC009161.1-201ENST00000417306 376 ntBASIC1.29□□□□□ -2.2
COL27A1Q8IZC6 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.29□□□□□ -2.2
COL27A1Q8IZC6 AL353689.1-201ENST00000438895 199 ntBASIC1.29□□□□□ -2.2
COL27A1Q8IZC6 AL353572.1-201ENST00000442490 417 ntBASIC1.29□□□□□ -2.2
COL27A1Q8IZC6 HMGN1P7-201ENST00000491722 313 ntBASIC1.29□□□□□ -2.2
COL27A1Q8IZC6 MTCO1P29-201ENST00000496868 288 ntBASIC1.29□□□□□ -2.2
COL27A1Q8IZC6 HMGB1P35-201ENST00000503360 598 ntBASIC1.29□□□□□ -2.2
COL27A1Q8IZC6 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms