Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 AC090543.2-201ENST00000483963 348 ntBASIC4.07□□□□□ -1.76
CCDC116Q8IYX3 AC004057.1-201ENST00000485827 348 ntBASIC4.07□□□□□ -1.76
CCDC116Q8IYX3 RNU6-762P-201ENST00000517107 102 ntBASIC4.07□□□□□ -1.76
CCDC116Q8IYX3 MIR2681-201ENST00000581814 105 ntBASIC4.07□□□□□ -1.76
CCDC116Q8IYX3 MIR4753-201ENST00000585119 83 ntBASIC4.07□□□□□ -1.76
CCDC116Q8IYX3 AC244505.7-201ENST00000599675 272 ntBASIC4.07□□□□□ -1.76
CCDC116Q8IYX3 AC113403.1-201ENST00000604910 193 ntBASIC4.07□□□□□ -1.76
CCDC116Q8IYX3 AC009831.4-201ENST00000620744 325 ntBASIC4.07□□□□□ -1.76
CCDC116Q8IYX3 MIR7641-1-201ENST00000627518 61 ntBASIC4.07□□□□□ -1.76
CCDC116Q8IYX3 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC116Q8IYX3 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC116Q8IYX3 AL672296.1-201ENST00000427780 2158 ntBASIC4.07□□□□□ -1.76
CCDC116Q8IYX3 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC116Q8IYX3 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC116Q8IYX3 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
CCDC116Q8IYX3 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CCDC116Q8IYX3 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC116Q8IYX3 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC116Q8IYX3 RNA5SP447-201ENST00000363749 119 ntBASIC4.06□□□□□ -1.76
CCDC116Q8IYX3 AF228730.3-201ENST00000436691 102 ntBASIC4.06□□□□□ -1.76
CCDC116Q8IYX3 SNORD11-201ENST00000459124 84 ntBASIC4.06□□□□□ -1.76
CCDC116Q8IYX3 AC015795.1-201ENST00000513669 327 ntBASIC4.06□□□□□ -1.76
CCDC116Q8IYX3 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.06□□□□□ -1.76
CCDC116Q8IYX3 AL365205.2-201ENST00000594586 68 ntBASIC4.06□□□□□ -1.76
CCDC116Q8IYX3 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CCDC116Q8IYX3 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC116Q8IYX3 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.06□□□□□ -1.76
CCDC116Q8IYX3 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC116Q8IYX3 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC116Q8IYX3 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC116Q8IYX3 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CCDC116Q8IYX3 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC116Q8IYX3 RNU6-117P-201ENST00000365415 107 ntBASIC4.05□□□□□ -1.76
CCDC116Q8IYX3 SNORA51.5-201ENST00000384126 131 ntBASIC4.05□□□□□ -1.76
CCDC116Q8IYX3 RNU6-49P-201ENST00000384256 107 ntBASIC4.05□□□□□ -1.76
CCDC116Q8IYX3 RNU6-57P-201ENST00000411348 103 ntBASIC4.05□□□□□ -1.76
CCDC116Q8IYX3 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC116Q8IYX3 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC116Q8IYX3 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC116Q8IYX3 RNU7-14P-201ENST00000459331 62 ntBASIC4.05□□□□□ -1.76
CCDC116Q8IYX3 RN7SL98P-201ENST00000462271 300 ntBASIC4.05□□□□□ -1.76
CCDC116Q8IYX3 RPL27AP5-201ENST00000469428 449 ntBASIC4.05□□□□□ -1.76
CCDC116Q8IYX3 RPS26P28-201ENST00000470806 348 ntBASIC4.05□□□□□ -1.76
CCDC116Q8IYX3 RN7SL810P-201ENST00000493031 276 ntBASIC4.05□□□□□ -1.76
CCDC116Q8IYX3 AC107934.2-201ENST00000518653 310 ntBASIC4.05□□□□□ -1.76
CCDC116Q8IYX3 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC116Q8IYX3 GNRHR2P1-201ENST00000555315 631 ntBASIC4.05□□□□□ -1.76
CCDC116Q8IYX3 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.05□□□□□ -1.76
CCDC116Q8IYX3 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC116Q8IYX3 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CCDC116Q8IYX3 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC116Q8IYX3 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
CCDC116Q8IYX3 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC116Q8IYX3 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.05□□□□□ -1.76
CCDC116Q8IYX3 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC116Q8IYX3 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CCDC116Q8IYX3 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC116Q8IYX3 SNORA62-201ENST00000365493 153 ntBASIC4.04□□□□□ -1.76
CCDC116Q8IYX3 RNU6-750P-201ENST00000390946 107 ntBASIC4.04□□□□□ -1.76
CCDC116Q8IYX3 MIR1302-5-201ENST00000408164 150 ntBASIC4.04□□□□□ -1.76
CCDC116Q8IYX3 RPL23AP52-201ENST00000439311 478 ntBASIC4.04□□□□□ -1.76
CCDC116Q8IYX3 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC116Q8IYX3 RN7SL459P-201ENST00000481078 302 ntBASIC4.04□□□□□ -1.76
CCDC116Q8IYX3 RPL36AP48-201ENST00000485521 314 ntBASIC4.04□□□□□ -1.76
CCDC116Q8IYX3 AC007751.1-201ENST00000529260 376 ntBASIC4.04□□□□□ -1.76
CCDC116Q8IYX3 AC079598.5-201ENST00000547460 117 ntBASIC4.04□□□□□ -1.76
CCDC116Q8IYX3 AC106785.1-201ENST00000565935 262 ntBASIC4.04□□□□□ -1.76
CCDC116Q8IYX3 Pinc.1-201ENST00000616452 154 ntBASIC4.04□□□□□ -1.76
CCDC116Q8IYX3 MIR7154-201ENST00000620673 73 ntBASIC4.04□□□□□ -1.76
CCDC116Q8IYX3 AC140479.6-201ENST00000633535 357 ntBASIC4.04□□□□□ -1.76
CCDC116Q8IYX3 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC116Q8IYX3 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC116Q8IYX3 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC116Q8IYX3 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CCDC116Q8IYX3 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.03□□□□□ -1.76
CCDC116Q8IYX3 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.03□□□□□ -1.76
CCDC116Q8IYX3 AC010680.1-201ENST00000590024 3590 ntBASIC4.03□□□□□ -1.76
CCDC116Q8IYX3 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC116Q8IYX3 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC116Q8IYX3 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
CCDC116Q8IYX3 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC116Q8IYX3 Y_RNA.111-201ENST00000363248 100 ntBASIC4.03□□□□□ -1.76
CCDC116Q8IYX3 RNU6-975P-201ENST00000384296 105 ntBASIC4.03□□□□□ -1.76
CCDC116Q8IYX3 SNORA51.10-201ENST00000384418 136 ntBASIC4.03□□□□□ -1.76
CCDC116Q8IYX3 Y_RNA.549-201ENST00000384657 102 ntBASIC4.03□□□□□ -1.76
CCDC116Q8IYX3 MIR570-201ENST00000384917 97 ntBASIC4.03□□□□□ -1.76
CCDC116Q8IYX3 RPS29P17-201ENST00000430795 166 ntBASIC4.03□□□□□ -1.76
CCDC116Q8IYX3 CALM2P4-201ENST00000430810 426 ntBASIC4.03□□□□□ -1.76
CCDC116Q8IYX3 AC245102.2-201ENST00000448956 180 ntBASIC4.03□□□□□ -1.76
CCDC116Q8IYX3 RNU7-23P-201ENST00000459465 62 ntBASIC4.03□□□□□ -1.76
CCDC116Q8IYX3 AP002884.2-201ENST00000471647 395 ntBASIC4.03□□□□□ -1.76
CCDC116Q8IYX3 PPBPP1-201ENST00000510807 373 ntBASIC4.03□□□□□ -1.76
CCDC116Q8IYX3 RNU7-149P-201ENST00000516739 59 ntBASIC4.03□□□□□ -1.76
CCDC116Q8IYX3 AC006064.5-201ENST00000541782 248 ntBASIC4.03□□□□□ -1.76
CCDC116Q8IYX3 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.03□□□□□ -1.76
CCDC116Q8IYX3 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC116Q8IYX3 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC4.03□□□□□ -1.76
CCDC116Q8IYX3 U6.98-201ENST00000637157 84 ntBASIC4.03□□□□□ -1.76
CCDC116Q8IYX3 AL596211.1-201ENST00000569873 2277 ntBASIC4.03□□□□□ -1.76
CCDC116Q8IYX3 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 178 ms