Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 RPS23P5-201ENST00000495419 428 ntBASIC1.85□□□□□ -2.11
CCDC83Q8IWF9 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.85□□□□□ -2.11
CCDC83Q8IWF9 AC005786.1-201ENST00000588553 154 ntBASIC1.85□□□□□ -2.11
CCDC83Q8IWF9 MIR502-201ENST00000606349 86 ntBASIC1.85□□□□□ -2.11
CCDC83Q8IWF9 AL133215.3-201ENST00000609801 448 ntBASIC1.85□□□□□ -2.11
CCDC83Q8IWF9 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.85□□□□□ -2.11
CCDC83Q8IWF9 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.85□□□□□ -2.11
CCDC83Q8IWF9 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.85□□□□□ -2.11
CCDC83Q8IWF9 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
CCDC83Q8IWF9 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
CCDC83Q8IWF9 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
CCDC83Q8IWF9 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CCDC83Q8IWF9 MIR340-201ENST00000362125 95 ntBASIC1.84□□□□□ -2.11
CCDC83Q8IWF9 Y_RNA.100-201ENST00000363141 102 ntBASIC1.84□□□□□ -2.11
CCDC83Q8IWF9 RNY4P14-201ENST00000363656 96 ntBASIC1.84□□□□□ -2.11
CCDC83Q8IWF9 RNU6-1090P-201ENST00000364065 94 ntBASIC1.84□□□□□ -2.11
CCDC83Q8IWF9 RNU6-968P-201ENST00000384076 107 ntBASIC1.84□□□□□ -2.11
CCDC83Q8IWF9 RNU6-784P-201ENST00000384330 106 ntBASIC1.84□□□□□ -2.11
CCDC83Q8IWF9 SNORD116-4-201ENST00000384733 96 ntBASIC1.84□□□□□ -2.11
CCDC83Q8IWF9 ZNF885P-201ENST00000420174 1098 ntBASIC1.84□□□□□ -2.11
CCDC83Q8IWF9 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.84□□□□□ -2.11
CCDC83Q8IWF9 SNRPEP8-201ENST00000442866 260 ntBASIC1.84□□□□□ -2.11
CCDC83Q8IWF9 Y_RNA.638-201ENST00000459374 113 ntBASIC1.84□□□□□ -2.11
CCDC83Q8IWF9 RNU7-66P-201ENST00000459469 62 ntBASIC1.84□□□□□ -2.11
CCDC83Q8IWF9 AC096745.1-201ENST00000509945 370 ntBASIC1.84□□□□□ -2.11
CCDC83Q8IWF9 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.84□□□□□ -2.11
CCDC83Q8IWF9 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.84□□□□□ -2.11
CCDC83Q8IWF9 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.84□□□□□ -2.11
CCDC83Q8IWF9 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.84□□□□□ -2.11
CCDC83Q8IWF9 TPRKBP2-201ENST00000565969 475 ntBASIC1.84□□□□□ -2.11
CCDC83Q8IWF9 MIR4713-201ENST00000582691 75 ntBASIC1.84□□□□□ -2.11
CCDC83Q8IWF9 CTHRC1P1-201ENST00000605383 469 ntBASIC1.84□□□□□ -2.11
CCDC83Q8IWF9 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
CCDC83Q8IWF9 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
CCDC83Q8IWF9 RNU6-562P-201ENST00000362731 107 ntBASIC1.83□□□□□ -2.12
CCDC83Q8IWF9 RNU1-17P-201ENST00000363022 152 ntBASIC1.83□□□□□ -2.12
CCDC83Q8IWF9 MIR521-1-201ENST00000384902 87 ntBASIC1.83□□□□□ -2.12
CCDC83Q8IWF9 SNORA12.2-201ENST00000391040 156 ntBASIC1.83□□□□□ -2.12
CCDC83Q8IWF9 RNA5SP494-201ENST00000410653 129 ntBASIC1.83□□□□□ -2.12
CCDC83Q8IWF9 RNU6-373P-201ENST00000411247 98 ntBASIC1.83□□□□□ -2.12
CCDC83Q8IWF9 RPS20P15-201ENST00000412792 311 ntBASIC1.83□□□□□ -2.12
CCDC83Q8IWF9 VN1R36P-201ENST00000414936 291 ntBASIC1.83□□□□□ -2.12
CCDC83Q8IWF9 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.83□□□□□ -2.12
CCDC83Q8IWF9 FAM206BP-201ENST00000510179 541 ntBASIC1.83□□□□□ -2.12
CCDC83Q8IWF9 MTND1P5-201ENST00000517906 940 ntBASIC1.83□□□□□ -2.12
CCDC83Q8IWF9 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.83□□□□□ -2.12
CCDC83Q8IWF9 AC016957.1-201ENST00000534895 309 ntBASIC1.83□□□□□ -2.12
CCDC83Q8IWF9 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.83□□□□□ -2.12
CCDC83Q8IWF9 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.83□□□□□ -2.12
CCDC83Q8IWF9 AC026470.2-201ENST00000561492 181 ntBASIC1.83□□□□□ -2.12
CCDC83Q8IWF9 MIR3683-201ENST00000580847 82 ntBASIC1.83□□□□□ -2.12
CCDC83Q8IWF9 AC012557.2-201ENST00000605919 418 ntBASIC1.83□□□□□ -2.12
CCDC83Q8IWF9 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CCDC83Q8IWF9 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.82□□□□□ -2.12
CCDC83Q8IWF9 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
CCDC83Q8IWF9 RNU4-42P-201ENST00000364738 142 ntBASIC1.82□□□□□ -2.12
CCDC83Q8IWF9 RNU6-1026P-201ENST00000384465 108 ntBASIC1.82□□□□□ -2.12
CCDC83Q8IWF9 RNU6-332P-201ENST00000391193 108 ntBASIC1.82□□□□□ -2.12
CCDC83Q8IWF9 MIR1323-201ENST00000408090 73 ntBASIC1.82□□□□□ -2.12
CCDC83Q8IWF9 AC139712.2-201ENST00000424302 339 ntBASIC1.82□□□□□ -2.12
CCDC83Q8IWF9 AL589823.1-201ENST00000429577 183 ntBASIC1.82□□□□□ -2.12
CCDC83Q8IWF9 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.82□□□□□ -2.12
CCDC83Q8IWF9 AC007395.1-201ENST00000451333 677 ntBASIC1.82□□□□□ -2.12
CCDC83Q8IWF9 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.82□□□□□ -2.12
CCDC83Q8IWF9 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.82□□□□□ -2.12
CCDC83Q8IWF9 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.82□□□□□ -2.12
CCDC83Q8IWF9 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.82□□□□□ -2.12
CCDC83Q8IWF9 MTND1P35-201ENST00000526739 508 ntBASIC1.82□□□□□ -2.12
CCDC83Q8IWF9 MRPS36P4-201ENST00000534436 298 ntBASIC1.82□□□□□ -2.12
CCDC83Q8IWF9 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.82□□□□□ -2.12
CCDC83Q8IWF9 MIR4255-201ENST00000579351 72 ntBASIC1.82□□□□□ -2.12
CCDC83Q8IWF9 AC146944.4-201ENST00000602697 718 ntBASIC1.82□□□□□ -2.12
CCDC83Q8IWF9 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.82□□□□□ -2.12
CCDC83Q8IWF9 RMST_3.1-201ENST00000611651 109 ntBASIC1.82□□□□□ -2.12
CCDC83Q8IWF9 uc_338.5-201ENST00000611839 155 ntBASIC1.82□□□□□ -2.12
CCDC83Q8IWF9 U4.5-201ENST00000617137 123 ntBASIC1.82□□□□□ -2.12
CCDC83Q8IWF9 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.82□□□□□ -2.12
CCDC83Q8IWF9 AC024614.3-201ENST00000637860 256 ntBASIC1.82□□□□□ -2.12
CCDC83Q8IWF9 Y_RNA.3-201ENST00000362331 103 ntBASIC1.81□□□□□ -2.12
CCDC83Q8IWF9 RNA5SP190-201ENST00000365222 118 ntBASIC1.81□□□□□ -2.12
CCDC83Q8IWF9 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.81□□□□□ -2.12
CCDC83Q8IWF9 SNORA18.2-201ENST00000383865 132 ntBASIC1.81□□□□□ -2.12
CCDC83Q8IWF9 MIR320A-201ENST00000385302 82 ntBASIC1.81□□□□□ -2.12
CCDC83Q8IWF9 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.81□□□□□ -2.12
CCDC83Q8IWF9 MTCO3P18-201ENST00000440206 761 ntBASIC1.81□□□□□ -2.12
CCDC83Q8IWF9 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.81□□□□□ -2.12
CCDC83Q8IWF9 RNU7-187P-201ENST00000458985 68 ntBASIC1.81□□□□□ -2.12
CCDC83Q8IWF9 RNA5SP57-201ENST00000459463 123 ntBASIC1.81□□□□□ -2.12
CCDC83Q8IWF9 AC130509.1-201ENST00000464158 433 ntBASIC1.81□□□□□ -2.12
CCDC83Q8IWF9 RNVU1-2-201ENST00000516326 135 ntBASIC1.81□□□□□ -2.12
CCDC83Q8IWF9 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.81□□□□□ -2.12
CCDC83Q8IWF9 DEFB131C-201ENST00000528817 165 ntBASIC1.81□□□□□ -2.12
CCDC83Q8IWF9 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.81□□□□□ -2.12
CCDC83Q8IWF9 AL138726.1-201ENST00000614873 333 ntBASIC1.81□□□□□ -2.12
CCDC83Q8IWF9 AC005562.2-201ENST00000618264 111 ntBASIC1.81□□□□□ -2.12
CCDC83Q8IWF9 MTND5P9-201ENST00000503854 1755 ntBASIC1.8□□□□□ -2.12
CCDC83Q8IWF9 Y_RNA.135-201ENST00000363439 95 ntBASIC1.8□□□□□ -2.12
CCDC83Q8IWF9 Y_RNA.140-201ENST00000363474 103 ntBASIC1.8□□□□□ -2.12
CCDC83Q8IWF9 Y_RNA.450-201ENST00000384198 113 ntBASIC1.8□□□□□ -2.12
CCDC83Q8IWF9 Y_RNA.554-201ENST00000384672 102 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 138 ms