Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.07□□□□□ -2.08
PRPF39Q86UA1 AP005639.2-201ENST00000527592 928 ntBASIC2.07□□□□□ -2.08
PRPF39Q86UA1 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.07□□□□□ -2.08
PRPF39Q86UA1 MIR3169-201ENST00000578032 83 ntBASIC2.07□□□□□ -2.08
PRPF39Q86UA1 AC008749.1-201ENST00000597650 306 ntBASIC2.07□□□□□ -2.08
PRPF39Q86UA1 AC068790.6-201ENST00000602558 258 ntBASIC2.07□□□□□ -2.08
PRPF39Q86UA1 AC016727.2-201ENST00000603988 621 ntBASIC2.07□□□□□ -2.08
PRPF39Q86UA1 RMST_6.1-201ENST00000611980 203 ntBASIC2.07□□□□□ -2.08
PRPF39Q86UA1 Y_RNA.783-201ENST00000613546 102 ntBASIC2.07□□□□□ -2.08
PRPF39Q86UA1 AC091932.3-201ENST00000624223 323 ntBASIC2.07□□□□□ -2.08
PRPF39Q86UA1 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.07□□□□□ -2.08
PRPF39Q86UA1 CBX3P1-201ENST00000325243 554 ntBASIC2.06□□□□□ -2.08
PRPF39Q86UA1 SNORD116-11-201ENST00000383882 92 ntBASIC2.06□□□□□ -2.08
PRPF39Q86UA1 RPS26P42-201ENST00000413485 326 ntBASIC2.06□□□□□ -2.08
PRPF39Q86UA1 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.06□□□□□ -2.08
PRPF39Q86UA1 AC004386.2-201ENST00000441858 148 ntBASIC2.06□□□□□ -2.08
PRPF39Q86UA1 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.06□□□□□ -2.08
PRPF39Q86UA1 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2.06□□□□□ -2.08
PRPF39Q86UA1 AC007395.1-201ENST00000451333 677 ntBASIC2.06□□□□□ -2.08
PRPF39Q86UA1 OR2AQ1P-201ENST00000451972 200 ntBASIC2.06□□□□□ -2.08
PRPF39Q86UA1 RNU1-131P-201ENST00000458943 161 ntBASIC2.06□□□□□ -2.08
PRPF39Q86UA1 MTCO2P30-201ENST00000503662 364 ntBASIC2.06□□□□□ -2.08
PRPF39Q86UA1 AC087441.2-201ENST00000529141 262 ntBASIC2.06□□□□□ -2.08
PRPF39Q86UA1 MIR3935-201ENST00000583472 104 ntBASIC2.06□□□□□ -2.08
PRPF39Q86UA1 MIR4448-201ENST00000584360 86 ntBASIC2.06□□□□□ -2.08
PRPF39Q86UA1 MIR4753-201ENST00000585119 83 ntBASIC2.06□□□□□ -2.08
PRPF39Q86UA1 MIR3942-201ENST00000585264 109 ntBASIC2.06□□□□□ -2.08
PRPF39Q86UA1 AL109918.3-201ENST00000603072 338 ntBASIC2.06□□□□□ -2.08
PRPF39Q86UA1 SNRPGP19-201ENST00000603826 189 ntBASIC2.06□□□□□ -2.08
PRPF39Q86UA1 AC124303.1-201ENST00000605703 360 ntBASIC2.06□□□□□ -2.08
PRPF39Q86UA1 AL359697.1-201ENST00000624879 587 ntBASIC2.06□□□□□ -2.08
PRPF39Q86UA1 AC068137.4-201ENST00000638485 296 ntBASIC2.06□□□□□ -2.08
PRPF39Q86UA1 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.06□□□□□ -2.08
PRPF39Q86UA1 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
PRPF39Q86UA1 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
PRPF39Q86UA1 AL356292.1-201ENST00000283110 373 ntBASIC2.05□□□□□ -2.08
PRPF39Q86UA1 RNU6-545P-201ENST00000362681 104 ntBASIC2.05□□□□□ -2.08
PRPF39Q86UA1 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
PRPF39Q86UA1 SNORA12.2-201ENST00000391040 156 ntBASIC2.05□□□□□ -2.08
PRPF39Q86UA1 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.05□□□□□ -2.08
PRPF39Q86UA1 AC016925.1-201ENST00000458303 298 ntBASIC2.05□□□□□ -2.08
PRPF39Q86UA1 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.05□□□□□ -2.08
PRPF39Q86UA1 RNU6-548P-201ENST00000517083 115 ntBASIC2.05□□□□□ -2.08
PRPF39Q86UA1 SUMO2P18-201ENST00000518873 252 ntBASIC2.05□□□□□ -2.08
PRPF39Q86UA1 MIR5089-201ENST00000580047 84 ntBASIC2.05□□□□□ -2.08
PRPF39Q86UA1 AC005786.1-201ENST00000588553 154 ntBASIC2.05□□□□□ -2.08
PRPF39Q86UA1 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.05□□□□□ -2.08
PRPF39Q86UA1 SNRPGP20-201ENST00000604477 205 ntBASIC2.05□□□□□ -2.08
PRPF39Q86UA1 AC009318.2-201ENST00000610917 651 ntBASIC2.05□□□□□ -2.08
PRPF39Q86UA1 TCL6_2.1-201ENST00000615162 119 ntBASIC2.05□□□□□ -2.08
PRPF39Q86UA1 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.05□□□□□ -2.08
PRPF39Q86UA1 ZNF355P-201ENST00000427301 3216 ntBASIC2.05□□□□□ -2.08
PRPF39Q86UA1 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
PRPF39Q86UA1 Y_RNA.135-201ENST00000363439 95 ntBASIC2.04□□□□□ -2.08
PRPF39Q86UA1 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.04□□□□□ -2.08
PRPF39Q86UA1 MIR549A-201ENST00000385268 96 ntBASIC2.04□□□□□ -2.08
PRPF39Q86UA1 MIR764-201ENST00000390811 85 ntBASIC2.04□□□□□ -2.08
PRPF39Q86UA1 SNORA48.1-201ENST00000390879 135 ntBASIC2.04□□□□□ -2.08
PRPF39Q86UA1 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
PRPF39Q86UA1 MIR300-201ENST00000401138 83 ntBASIC2.04□□□□□ -2.08
PRPF39Q86UA1 MIR1277-201ENST00000408536 78 ntBASIC2.04□□□□□ -2.08
PRPF39Q86UA1 FCF1P9-201ENST00000412546 282 ntBASIC2.04□□□□□ -2.08
PRPF39Q86UA1 EIF4EP2-201ENST00000422816 654 ntBASIC2.04□□□□□ -2.08
PRPF39Q86UA1 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.04□□□□□ -2.08
PRPF39Q86UA1 RPL23AP75-201ENST00000491601 451 ntBASIC2.04□□□□□ -2.08
PRPF39Q86UA1 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.04□□□□□ -2.08
PRPF39Q86UA1 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.04□□□□□ -2.08
PRPF39Q86UA1 RNU6-295P-201ENST00000516901 104 ntBASIC2.04□□□□□ -2.08
PRPF39Q86UA1 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.04□□□□□ -2.08
PRPF39Q86UA1 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.04□□□□□ -2.08
PRPF39Q86UA1 AC083806.3-201ENST00000614016 455 ntBASIC2.04□□□□□ -2.08
PRPF39Q86UA1 RNU6-306P-201ENST00000384617 107 ntBASIC2.03□□□□□ -2.08
PRPF39Q86UA1 RNU6-482P-201ENST00000391068 107 ntBASIC2.03□□□□□ -2.08
PRPF39Q86UA1 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
PRPF39Q86UA1 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC2.03□□□□□ -2.08
PRPF39Q86UA1 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.03□□□□□ -2.08
PRPF39Q86UA1 RNU6-864P-201ENST00000516256 108 ntBASIC2.03□□□□□ -2.08
PRPF39Q86UA1 DEFB131C-201ENST00000528817 165 ntBASIC2.03□□□□□ -2.08
PRPF39Q86UA1 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.03□□□□□ -2.08
PRPF39Q86UA1 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.03□□□□□ -2.08
PRPF39Q86UA1 AL096840.1-201ENST00000603287 93 ntBASIC2.03□□□□□ -2.08
PRPF39Q86UA1 7SK.7-201ENST00000603504 247 ntBASIC2.03□□□□□ -2.08
PRPF39Q86UA1 AC006504.8-201ENST00000621046 635 ntBASIC2.03□□□□□ -2.08
PRPF39Q86UA1 DUXAP9-208ENST00000622815 614 ntBASIC2.03□□□□□ -2.08
PRPF39Q86UA1 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.03□□□□□ -2.08
PRPF39Q86UA1 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
PRPF39Q86UA1 AL159152.1-201ENST00000635019 2587 ntBASIC2.03□□□□□ -2.09
PRPF39Q86UA1 SNORD50.1-201ENST00000362987 71 ntBASIC2.02□□□□□ -2.09
PRPF39Q86UA1 RNU4-9P-201ENST00000364951 139 ntBASIC2.02□□□□□ -2.09
PRPF39Q86UA1 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
PRPF39Q86UA1 MIR583-201ENST00000384846 75 ntBASIC2.02□□□□□ -2.09
PRPF39Q86UA1 NCOR1P3-201ENST00000420479 303 ntBASIC2.02□□□□□ -2.09
PRPF39Q86UA1 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.02□□□□□ -2.09
PRPF39Q86UA1 AC097473.1-201ENST00000508142 408 ntBASIC2.02□□□□□ -2.09
PRPF39Q86UA1 RNVU1-2-201ENST00000516326 135 ntBASIC2.02□□□□□ -2.09
PRPF39Q86UA1 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.02□□□□□ -2.09
PRPF39Q86UA1 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.02□□□□□ -2.09
PRPF39Q86UA1 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.02□□□□□ -2.09
PRPF39Q86UA1 MIR4273-201ENST00000582824 84 ntBASIC2.02□□□□□ -2.09
PRPF39Q86UA1 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms