Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 RNU6-1274P-201ENST00000384557 107 ntBASIC2.14□□□□□ -2.07
NPHP3Q7Z494 RNU6-95P-201ENST00000384697 107 ntBASIC2.14□□□□□ -2.07
NPHP3Q7Z494 AL030996.1-201ENST00000411430 235 ntBASIC2.14□□□□□ -2.07
NPHP3Q7Z494 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.14□□□□□ -2.07
NPHP3Q7Z494 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.14□□□□□ -2.07
NPHP3Q7Z494 RPS29P27-201ENST00000463711 170 ntBASIC2.14□□□□□ -2.07
NPHP3Q7Z494 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.14□□□□□ -2.07
NPHP3Q7Z494 MTCO2P30-201ENST00000503662 364 ntBASIC2.14□□□□□ -2.07
NPHP3Q7Z494 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.14□□□□□ -2.07
NPHP3Q7Z494 AC025465.4-201ENST00000513422 638 ntBASIC2.14□□□□□ -2.07
NPHP3Q7Z494 RNU6-864P-201ENST00000516256 108 ntBASIC2.14□□□□□ -2.07
NPHP3Q7Z494 RNA5SP137-201ENST00000516833 135 ntBASIC2.14□□□□□ -2.07
NPHP3Q7Z494 RNU1-92P-201ENST00000517017 135 ntBASIC2.14□□□□□ -2.07
NPHP3Q7Z494 RN7SKP256-201ENST00000517201 314 ntBASIC2.14□□□□□ -2.07
NPHP3Q7Z494 RNU2-19P-201ENST00000517288 84 ntBASIC2.14□□□□□ -2.07
NPHP3Q7Z494 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.14□□□□□ -2.07
NPHP3Q7Z494 HSPE1P4-201ENST00000550617 308 ntBASIC2.14□□□□□ -2.07
NPHP3Q7Z494 SCOCP1-201ENST00000554676 349 ntBASIC2.14□□□□□ -2.07
NPHP3Q7Z494 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.14□□□□□ -2.07
NPHP3Q7Z494 AL133216.2-202ENST00000634512 349 ntBASIC2.14□□□□□ -2.07
NPHP3Q7Z494 RNU6-1141P-201ENST00000364520 107 ntBASIC2.13□□□□□ -2.07
NPHP3Q7Z494 SNORD48-201ENST00000364953 64 ntBASIC2.13□□□□□ -2.07
NPHP3Q7Z494 SNORD116-11-201ENST00000383882 92 ntBASIC2.13□□□□□ -2.07
NPHP3Q7Z494 RNU6-128P-201ENST00000383976 107 ntBASIC2.13□□□□□ -2.07
NPHP3Q7Z494 RNU6-42P-201ENST00000384165 107 ntBASIC2.13□□□□□ -2.07
NPHP3Q7Z494 CBX3P9-201ENST00000402326 552 ntBASIC2.13□□□□□ -2.07
NPHP3Q7Z494 AC244670.1-201ENST00000436879 112 ntBASIC2.13□□□□□ -2.07
NPHP3Q7Z494 RBMX2P4-201ENST00000441256 376 ntBASIC2.13□□□□□ -2.07
NPHP3Q7Z494 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.13□□□□□ -2.07
NPHP3Q7Z494 AC096745.1-201ENST00000509945 370 ntBASIC2.13□□□□□ -2.07
NPHP3Q7Z494 SNORA31.16-201ENST00000516773 139 ntBASIC2.13□□□□□ -2.07
NPHP3Q7Z494 RNU6-667P-201ENST00000517186 102 ntBASIC2.13□□□□□ -2.07
NPHP3Q7Z494 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.13□□□□□ -2.07
NPHP3Q7Z494 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.13□□□□□ -2.07
NPHP3Q7Z494 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.13□□□□□ -2.07
NPHP3Q7Z494 AC063943.3-201ENST00000615562 356 ntBASIC2.13□□□□□ -2.07
NPHP3Q7Z494 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.12□□□□□ -2.07
NPHP3Q7Z494 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
NPHP3Q7Z494 RNU6-562P-201ENST00000362731 107 ntBASIC2.12□□□□□ -2.07
NPHP3Q7Z494 Y_RNA.135-201ENST00000363439 95 ntBASIC2.12□□□□□ -2.07
NPHP3Q7Z494 Y_RNA.301-201ENST00000364990 103 ntBASIC2.12□□□□□ -2.07
NPHP3Q7Z494 RNU6-1283P-201ENST00000365314 105 ntBASIC2.12□□□□□ -2.07
NPHP3Q7Z494 RNU6-53P-201ENST00000365367 106 ntBASIC2.12□□□□□ -2.07
NPHP3Q7Z494 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
NPHP3Q7Z494 Y_RNA.390-201ENST00000383932 102 ntBASIC2.12□□□□□ -2.07
NPHP3Q7Z494 SNORA36A-201ENST00000384221 132 ntBASIC2.12□□□□□ -2.07
NPHP3Q7Z494 Y_RNA.504-201ENST00000384481 104 ntBASIC2.12□□□□□ -2.07
NPHP3Q7Z494 RNU6-876P-201ENST00000391295 104 ntBASIC2.12□□□□□ -2.07
NPHP3Q7Z494 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
NPHP3Q7Z494 IFNA20P-201ENST00000436840 528 ntBASIC2.12□□□□□ -2.07
NPHP3Q7Z494 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.12□□□□□ -2.07
NPHP3Q7Z494 RNA5SP480-201ENST00000516840 109 ntBASIC2.12□□□□□ -2.07
NPHP3Q7Z494 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.12□□□□□ -2.07
NPHP3Q7Z494 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.12□□□□□ -2.07
NPHP3Q7Z494 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.12□□□□□ -2.07
NPHP3Q7Z494 AC026271.5-201ENST00000577873 130 ntBASIC2.12□□□□□ -2.07
NPHP3Q7Z494 MIR3976-201ENST00000606807 139 ntBASIC2.12□□□□□ -2.07
NPHP3Q7Z494 AL353770.2-201ENST00000620024 78 ntBASIC2.12□□□□□ -2.07
NPHP3Q7Z494 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
NPHP3Q7Z494 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
NPHP3Q7Z494 Y_RNA.160-201ENST00000363677 92 ntBASIC2.11□□□□□ -2.07
NPHP3Q7Z494 MIR17-201ENST00000385012 84 ntBASIC2.11□□□□□ -2.07
NPHP3Q7Z494 MT-TL1-201ENST00000386347 75 ntBASIC2.11□□□□□ -2.07
NPHP3Q7Z494 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
NPHP3Q7Z494 HMGN2P39-201ENST00000398005 273 ntBASIC2.11□□□□□ -2.07
NPHP3Q7Z494 RNU2-32P-201ENST00000411193 191 ntBASIC2.11□□□□□ -2.07
NPHP3Q7Z494 AL590135.1-201ENST00000422215 156 ntBASIC2.11□□□□□ -2.07
NPHP3Q7Z494 AC019205.3-201ENST00000424573 156 ntBASIC2.11□□□□□ -2.07
NPHP3Q7Z494 RPL23AP95-201ENST00000426806 265 ntBASIC2.11□□□□□ -2.07
NPHP3Q7Z494 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.11□□□□□ -2.07
NPHP3Q7Z494 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.11□□□□□ -2.07
NPHP3Q7Z494 AC016700.2-201ENST00000446011 156 ntBASIC2.11□□□□□ -2.07
NPHP3Q7Z494 RNU6-329P-201ENST00000459618 107 ntBASIC2.11□□□□□ -2.07
NPHP3Q7Z494 AC015911.1-201ENST00000495111 156 ntBASIC2.11□□□□□ -2.07
NPHP3Q7Z494 MTCO1P29-201ENST00000496868 288 ntBASIC2.11□□□□□ -2.07
NPHP3Q7Z494 HMGB1P35-201ENST00000503360 598 ntBASIC2.11□□□□□ -2.07
NPHP3Q7Z494 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.11□□□□□ -2.07
NPHP3Q7Z494 AC024614.2-201ENST00000577584 372 ntBASIC2.11□□□□□ -2.07
NPHP3Q7Z494 CPDP1-201ENST00000579660 283 ntBASIC2.11□□□□□ -2.07
NPHP3Q7Z494 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.11□□□□□ -2.07
NPHP3Q7Z494 MIR4742-201ENST00000581069 85 ntBASIC2.11□□□□□ -2.07
NPHP3Q7Z494 AC011712.1-201ENST00000588959 234 ntBASIC2.11□□□□□ -2.07
NPHP3Q7Z494 AC078899.2-201ENST00000595282 212 ntBASIC2.11□□□□□ -2.07
NPHP3Q7Z494 AL078603.1-201ENST00000603824 313 ntBASIC2.11□□□□□ -2.07
NPHP3Q7Z494 SNORA43.4-201ENST00000629559 138 ntBASIC2.11□□□□□ -2.07
NPHP3Q7Z494 SNORD98-201ENST00000636377 67 ntBASIC2.11□□□□□ -2.07
NPHP3Q7Z494 AC009541.1-201ENST00000438279 2662 ntBASIC2.11□□□□□ -2.07
NPHP3Q7Z494 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.1□□□□□ -2.07
NPHP3Q7Z494 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
NPHP3Q7Z494 RNU6-227P-201ENST00000362865 103 ntBASIC2.1□□□□□ -2.07
NPHP3Q7Z494 RNU6-944P-201ENST00000364023 107 ntBASIC2.1□□□□□ -2.07
NPHP3Q7Z494 SNORD114-22-201ENST00000365423 72 ntBASIC2.1□□□□□ -2.07
NPHP3Q7Z494 MIR521-1-201ENST00000384902 87 ntBASIC2.1□□□□□ -2.07
NPHP3Q7Z494 MTND4LP16-201ENST00000440828 295 ntBASIC2.1□□□□□ -2.07
NPHP3Q7Z494 IPO7P1-201ENST00000442031 636 ntBASIC2.1□□□□□ -2.07
NPHP3Q7Z494 AC130509.1-201ENST00000464158 433 ntBASIC2.1□□□□□ -2.07
NPHP3Q7Z494 PTP4A1P4-201ENST00000512479 322 ntBASIC2.1□□□□□ -2.07
NPHP3Q7Z494 RNA5SP220-201ENST00000516298 104 ntBASIC2.1□□□□□ -2.07
NPHP3Q7Z494 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.1□□□□□ -2.07
NPHP3Q7Z494 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms