Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.61□□□□□ -1.83
RUFY4Q6ZNE9 MZT1P2-201ENST00000604387 248 ntBASIC3.61□□□□□ -1.83
RUFY4Q6ZNE9 AC010900.2-201ENST00000604508 210 ntBASIC3.61□□□□□ -1.83
RUFY4Q6ZNE9 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.61□□□□□ -1.83
RUFY4Q6ZNE9 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
RUFY4Q6ZNE9 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.61□□□□□ -1.83
RUFY4Q6ZNE9 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RUFY4Q6ZNE9 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RUFY4Q6ZNE9 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
RUFY4Q6ZNE9 SNORD56.3-201ENST00000363507 71 ntBASIC3.6□□□□□ -1.83
RUFY4Q6ZNE9 RNU6-1083P-201ENST00000384022 107 ntBASIC3.6□□□□□ -1.83
RUFY4Q6ZNE9 Y_RNA.498-201ENST00000384460 102 ntBASIC3.6□□□□□ -1.83
RUFY4Q6ZNE9 Y_RNA.510-201ENST00000384511 114 ntBASIC3.6□□□□□ -1.83
RUFY4Q6ZNE9 AL512633.1-201ENST00000399931 655 ntBASIC3.6□□□□□ -1.83
RUFY4Q6ZNE9 AC097463.2-201ENST00000421074 142 ntBASIC3.6□□□□□ -1.83
RUFY4Q6ZNE9 AL353705.1-201ENST00000433468 480 ntBASIC3.6□□□□□ -1.83
RUFY4Q6ZNE9 RNU6-625P-201ENST00000459412 107 ntBASIC3.6□□□□□ -1.83
RUFY4Q6ZNE9 AC091179.3-201ENST00000474761 144 ntBASIC3.6□□□□□ -1.83
RUFY4Q6ZNE9 AC103975.1-201ENST00000482506 483 ntBASIC3.6□□□□□ -1.83
RUFY4Q6ZNE9 RNU6-344P-201ENST00000516635 111 ntBASIC3.6□□□□□ -1.83
RUFY4Q6ZNE9 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.6□□□□□ -1.83
RUFY4Q6ZNE9 EIF4BP1-201ENST00000554881 351 ntBASIC3.6□□□□□ -1.83
RUFY4Q6ZNE9 AC022441.3-201ENST00000605737 136 ntBASIC3.6□□□□□ -1.83
RUFY4Q6ZNE9 AL357075.2-201ENST00000614906 189 ntBASIC3.6□□□□□ -1.83
RUFY4Q6ZNE9 TCL6_2.1-201ENST00000615162 119 ntBASIC3.6□□□□□ -1.83
RUFY4Q6ZNE9 AL590240.4-201ENST00000616908 390 ntBASIC3.6□□□□□ -1.83
RUFY4Q6ZNE9 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
RUFY4Q6ZNE9 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
RUFY4Q6ZNE9 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RUFY4Q6ZNE9 AC069528.2-201ENST00000624849 1991 ntBASIC3.6□□□□□ -1.83
RUFY4Q6ZNE9 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RUFY4Q6ZNE9 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.59□□□□□ -1.83
RUFY4Q6ZNE9 MIR410-201ENST00000362222 80 ntBASIC3.59□□□□□ -1.83
RUFY4Q6ZNE9 Y_RNA.44-201ENST00000362676 108 ntBASIC3.59□□□□□ -1.83
RUFY4Q6ZNE9 Y_RNA.54-201ENST00000362766 105 ntBASIC3.59□□□□□ -1.83
RUFY4Q6ZNE9 Y_RNA.136-201ENST00000363444 102 ntBASIC3.59□□□□□ -1.83
RUFY4Q6ZNE9 RNA5SP139-201ENST00000364340 117 ntBASIC3.59□□□□□ -1.83
RUFY4Q6ZNE9 Y_RNA.277-201ENST00000364754 102 ntBASIC3.59□□□□□ -1.83
RUFY4Q6ZNE9 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.59□□□□□ -1.83
RUFY4Q6ZNE9 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.59□□□□□ -1.83
RUFY4Q6ZNE9 IFNA11P-201ENST00000446352 526 ntBASIC3.59□□□□□ -1.83
RUFY4Q6ZNE9 RNU6-138P-201ENST00000515952 107 ntBASIC3.59□□□□□ -1.83
RUFY4Q6ZNE9 MIR2682-201ENST00000580305 110 ntBASIC3.59□□□□□ -1.83
RUFY4Q6ZNE9 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.59□□□□□ -1.83
RUFY4Q6ZNE9 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.59□□□□□ -1.83
RUFY4Q6ZNE9 AC098479.1-201ENST00000609225 154 ntBASIC3.59□□□□□ -1.83
RUFY4Q6ZNE9 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.59□□□□□ -1.83
RUFY4Q6ZNE9 AC005562.2-201ENST00000618264 111 ntBASIC3.59□□□□□ -1.83
RUFY4Q6ZNE9 AC073476.4-201ENST00000628409 72 ntBASIC3.59□□□□□ -1.83
RUFY4Q6ZNE9 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
RUFY4Q6ZNE9 AC091564.4-201ENST00000533934 2194 ntBASIC3.59□□□□□ -1.84
RUFY4Q6ZNE9 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
RUFY4Q6ZNE9 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
RUFY4Q6ZNE9 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.59□□□□□ -1.84
RUFY4Q6ZNE9 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.58□□□□□ -1.84
RUFY4Q6ZNE9 MIR422A-201ENST00000362286 90 ntBASIC3.58□□□□□ -1.84
RUFY4Q6ZNE9 MIR591-201ENST00000385290 95 ntBASIC3.58□□□□□ -1.84
RUFY4Q6ZNE9 MIR548I3-201ENST00000408378 149 ntBASIC3.58□□□□□ -1.84
RUFY4Q6ZNE9 MIR548I1-201ENST00000408810 149 ntBASIC3.58□□□□□ -1.84
RUFY4Q6ZNE9 RNU4-30P-201ENST00000410245 143 ntBASIC3.58□□□□□ -1.84
RUFY4Q6ZNE9 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.58□□□□□ -1.84
RUFY4Q6ZNE9 AC005042.3-201ENST00000453230 174 ntBASIC3.58□□□□□ -1.84
RUFY4Q6ZNE9 AL139109.1-201ENST00000455491 297 ntBASIC3.58□□□□□ -1.84
RUFY4Q6ZNE9 AC145146.1-201ENST00000496370 254 ntBASIC3.58□□□□□ -1.84
RUFY4Q6ZNE9 RNA5SP112-201ENST00000515937 99 ntBASIC3.58□□□□□ -1.84
RUFY4Q6ZNE9 RNU6-182P-201ENST00000516970 105 ntBASIC3.58□□□□□ -1.84
RUFY4Q6ZNE9 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.58□□□□□ -1.84
RUFY4Q6ZNE9 AC022080.3-201ENST00000544433 482 ntBASIC3.58□□□□□ -1.84
RUFY4Q6ZNE9 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.58□□□□□ -1.84
RUFY4Q6ZNE9 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.58□□□□□ -1.84
RUFY4Q6ZNE9 AC018692.3-201ENST00000623929 123 ntBASIC3.58□□□□□ -1.84
RUFY4Q6ZNE9 AC006386.2-201ENST00000624491 75 ntBASIC3.58□□□□□ -1.84
RUFY4Q6ZNE9 AC012005.1-201ENST00000624575 75 ntBASIC3.58□□□□□ -1.84
RUFY4Q6ZNE9 U6.98-201ENST00000637157 84 ntBASIC3.58□□□□□ -1.84
RUFY4Q6ZNE9 AC091152.2-201ENST00000591628 2569 ntBASIC3.58□□□□□ -1.84
RUFY4Q6ZNE9 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.58□□□□□ -1.84
RUFY4Q6ZNE9 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RUFY4Q6ZNE9 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
RUFY4Q6ZNE9 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RUFY4Q6ZNE9 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.58□□□□□ -1.84
RUFY4Q6ZNE9 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RUFY4Q6ZNE9 MIR148B-201ENST00000362252 99 ntBASIC3.57□□□□□ -1.84
RUFY4Q6ZNE9 Y_RNA.286-201ENST00000364813 102 ntBASIC3.57□□□□□ -1.84
RUFY4Q6ZNE9 SNORA72.2-201ENST00000365028 127 ntBASIC3.57□□□□□ -1.84
RUFY4Q6ZNE9 Y_RNA.331-201ENST00000365267 102 ntBASIC3.57□□□□□ -1.84
RUFY4Q6ZNE9 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
RUFY4Q6ZNE9 SNORA46.1-201ENST00000391069 153 ntBASIC3.57□□□□□ -1.84
RUFY4Q6ZNE9 RNA5SP229-201ENST00000410809 99 ntBASIC3.57□□□□□ -1.84
RUFY4Q6ZNE9 RNU2-14P-201ENST00000411053 191 ntBASIC3.57□□□□□ -1.84
RUFY4Q6ZNE9 ELOCP21-201ENST00000412558 336 ntBASIC3.57□□□□□ -1.84
RUFY4Q6ZNE9 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.57□□□□□ -1.84
RUFY4Q6ZNE9 MTCO1P5-201ENST00000433573 344 ntBASIC3.57□□□□□ -1.84
RUFY4Q6ZNE9 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.57□□□□□ -1.84
RUFY4Q6ZNE9 RRN3P3-201ENST00000549207 578 ntBASIC3.57□□□□□ -1.84
RUFY4Q6ZNE9 AC017071.1-201ENST00000564407 2204 ntBASIC3.57□□□□□ -1.84
RUFY4Q6ZNE9 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.57□□□□□ -1.84
RUFY4Q6ZNE9 AC008749.1-201ENST00000597650 306 ntBASIC3.57□□□□□ -1.84
RUFY4Q6ZNE9 uc_338.1-201ENST00000612113 180 ntBASIC3.57□□□□□ -1.84
RUFY4Q6ZNE9 AC006001.4-201ENST00000622243 395 ntBASIC3.57□□□□□ -1.84
RUFY4Q6ZNE9 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 172.5 ms