Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 AC007677.1-201ENST00000445757 515 ntBASIC1.5□□□□□ -2.17
NIPAL3Q6P499 MTND1P29-201ENST00000448112 647 ntBASIC1.5□□□□□ -2.17
NIPAL3Q6P499 snoU13.9-201ENST00000458927 103 ntBASIC1.5□□□□□ -2.17
NIPAL3Q6P499 AC083904.1-201ENST00000487828 231 ntBASIC1.5□□□□□ -2.17
NIPAL3Q6P499 RPL36AP21-201ENST00000490372 323 ntBASIC1.5□□□□□ -2.17
NIPAL3Q6P499 RNU6-1041P-201ENST00000516254 102 ntBASIC1.5□□□□□ -2.17
NIPAL3Q6P499 RNU6-856P-201ENST00000516959 98 ntBASIC1.5□□□□□ -2.17
NIPAL3Q6P499 MRPS36P4-201ENST00000534436 298 ntBASIC1.5□□□□□ -2.17
NIPAL3Q6P499 AC026371.1-201ENST00000551867 419 ntBASIC1.5□□□□□ -2.17
NIPAL3Q6P499 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.5□□□□□ -2.17
NIPAL3Q6P499 SNORA59B-202ENST00000578183 701 ntBASIC1.5□□□□□ -2.17
NIPAL3Q6P499 MIR4298-201ENST00000584380 73 ntBASIC1.5□□□□□ -2.17
NIPAL3Q6P499 AP000907.4-201ENST00000604143 237 ntBASIC1.5□□□□□ -2.17
NIPAL3Q6P499 RNU6-89P-201ENST00000606519 100 ntBASIC1.5□□□□□ -2.17
NIPAL3Q6P499 AC004492.1-201ENST00000607036 742 ntBASIC1.5□□□□□ -2.17
NIPAL3Q6P499 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.5□□□□□ -2.17
NIPAL3Q6P499 RMST_3.1-201ENST00000611651 109 ntBASIC1.5□□□□□ -2.17
NIPAL3Q6P499 TCL6_2.1-201ENST00000615162 119 ntBASIC1.5□□□□□ -2.17
NIPAL3Q6P499 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.5□□□□□ -2.17
NIPAL3Q6P499 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.5□□□□□ -2.17
NIPAL3Q6P499 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.5□□□□□ -2.17
NIPAL3Q6P499 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
NIPAL3Q6P499 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.49□□□□□ -2.17
NIPAL3Q6P499 Y_RNA.167-201ENST00000363735 109 ntBASIC1.49□□□□□ -2.17
NIPAL3Q6P499 MIR504-201ENST00000385065 83 ntBASIC1.49□□□□□ -2.17
NIPAL3Q6P499 MIR1267-201ENST00000408723 78 ntBASIC1.49□□□□□ -2.17
NIPAL3Q6P499 RNU6-1068P-201ENST00000410958 103 ntBASIC1.49□□□□□ -2.17
NIPAL3Q6P499 RPS20P15-201ENST00000412792 311 ntBASIC1.49□□□□□ -2.17
NIPAL3Q6P499 UBE2V1P8-201ENST00000437166 265 ntBASIC1.49□□□□□ -2.17
NIPAL3Q6P499 AC005908.1-201ENST00000468701 347 ntBASIC1.49□□□□□ -2.17
NIPAL3Q6P499 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.49□□□□□ -2.17
NIPAL3Q6P499 AC067942.3-201ENST00000512025 362 ntBASIC1.49□□□□□ -2.17
NIPAL3Q6P499 RNU2-34P-201ENST00000516534 121 ntBASIC1.49□□□□□ -2.17
NIPAL3Q6P499 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.49□□□□□ -2.17
NIPAL3Q6P499 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.49□□□□□ -2.17
NIPAL3Q6P499 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.49□□□□□ -2.17
NIPAL3Q6P499 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.49□□□□□ -2.17
NIPAL3Q6P499 AC146944.4-201ENST00000602697 718 ntBASIC1.49□□□□□ -2.17
NIPAL3Q6P499 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.49□□□□□ -2.17
NIPAL3Q6P499 AC068137.3-201ENST00000639191 341 ntBASIC1.49□□□□□ -2.17
NIPAL3Q6P499 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
NIPAL3Q6P499 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
NIPAL3Q6P499 RNU1-96P-201ENST00000364163 162 ntBASIC1.48□□□□□ -2.17
NIPAL3Q6P499 RNU6-522P-201ENST00000364497 107 ntBASIC1.48□□□□□ -2.17
NIPAL3Q6P499 CYCSP49-201ENST00000420810 319 ntBASIC1.48□□□□□ -2.17
NIPAL3Q6P499 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.48□□□□□ -2.17
NIPAL3Q6P499 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.48□□□□□ -2.17
NIPAL3Q6P499 OR2AQ1P-201ENST00000451972 200 ntBASIC1.48□□□□□ -2.17
NIPAL3Q6P499 snoU13.30-201ENST00000458951 104 ntBASIC1.48□□□□□ -2.17
NIPAL3Q6P499 AC114982.1-201ENST00000469402 321 ntBASIC1.48□□□□□ -2.17
NIPAL3Q6P499 RNU6-1281P-201ENST00000516223 105 ntBASIC1.48□□□□□ -2.17
NIPAL3Q6P499 RNU6-548P-201ENST00000517083 115 ntBASIC1.48□□□□□ -2.17
NIPAL3Q6P499 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.48□□□□□ -2.17
NIPAL3Q6P499 CPDP1-201ENST00000579660 283 ntBASIC1.48□□□□□ -2.17
NIPAL3Q6P499 AL162413.1-201ENST00000603198 110 ntBASIC1.48□□□□□ -2.17
NIPAL3Q6P499 CTHRC1P1-201ENST00000605383 469 ntBASIC1.48□□□□□ -2.17
NIPAL3Q6P499 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.48□□□□□ -2.17
NIPAL3Q6P499 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.48□□□□□ -2.17
NIPAL3Q6P499 AC068205.3-201ENST00000636385 468 ntBASIC1.48□□□□□ -2.17
NIPAL3Q6P499 AC010615.1-201ENST00000594254 1764 ntBASIC1.48□□□□□ -2.17
NIPAL3Q6P499 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
NIPAL3Q6P499 RNU6-1019P-201ENST00000364424 107 ntBASIC1.47□□□□□ -2.17
NIPAL3Q6P499 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
NIPAL3Q6P499 MIR320B2-201ENST00000408479 138 ntBASIC1.47□□□□□ -2.17
NIPAL3Q6P499 SNRPEP10-201ENST00000420249 274 ntBASIC1.47□□□□□ -2.17
NIPAL3Q6P499 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.47□□□□□ -2.17
NIPAL3Q6P499 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.47□□□□□ -2.17
NIPAL3Q6P499 FTH1P12-201ENST00000432137 551 ntBASIC1.47□□□□□ -2.17
NIPAL3Q6P499 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.47□□□□□ -2.17
NIPAL3Q6P499 HSPE1P9-201ENST00000440046 311 ntBASIC1.47□□□□□ -2.17
NIPAL3Q6P499 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.47□□□□□ -2.17
NIPAL3Q6P499 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.47□□□□□ -2.17
NIPAL3Q6P499 RNU6-948P-201ENST00000516374 107 ntBASIC1.47□□□□□ -2.17
NIPAL3Q6P499 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.47□□□□□ -2.17
NIPAL3Q6P499 SNRPGP20-201ENST00000604477 205 ntBASIC1.47□□□□□ -2.17
NIPAL3Q6P499 DISC2.1-201ENST00000612827 205 ntBASIC1.47□□□□□ -2.17
NIPAL3Q6P499 FAM157A-202ENST00000615155 405 ntBASIC1.47□□□□□ -2.17
NIPAL3Q6P499 AC137590.2-201ENST00000619709 240 ntBASIC1.47□□□□□ -2.17
NIPAL3Q6P499 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.47□□□□□ -2.17
NIPAL3Q6P499 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
NIPAL3Q6P499 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
NIPAL3Q6P499 AC006026.1-201ENST00000444025 1803 ntBASIC1.46□□□□□ -2.18
NIPAL3Q6P499 Y_RNA.67-201ENST00000362870 100 ntBASIC1.46□□□□□ -2.18
NIPAL3Q6P499 Y_RNA.373-201ENST00000365600 103 ntBASIC1.46□□□□□ -2.18
NIPAL3Q6P499 RNU6-128P-201ENST00000383976 107 ntBASIC1.46□□□□□ -2.18
NIPAL3Q6P499 RNU6-784P-201ENST00000384330 106 ntBASIC1.46□□□□□ -2.18
NIPAL3Q6P499 Y_RNA.559-201ENST00000384686 107 ntBASIC1.46□□□□□ -2.18
NIPAL3Q6P499 RNU6-360P-201ENST00000390944 104 ntBASIC1.46□□□□□ -2.18
NIPAL3Q6P499 RN7SKP101-201ENST00000411376 320 ntBASIC1.46□□□□□ -2.18
NIPAL3Q6P499 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.46□□□□□ -2.18
NIPAL3Q6P499 MTND1P1-201ENST00000445453 368 ntBASIC1.46□□□□□ -2.18
NIPAL3Q6P499 AC009237.7-201ENST00000447357 229 ntBASIC1.46□□□□□ -2.18
NIPAL3Q6P499 AC019235.1-201ENST00000503847 207 ntBASIC1.46□□□□□ -2.18
NIPAL3Q6P499 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.46□□□□□ -2.18
NIPAL3Q6P499 AC011406.1-201ENST00000512440 370 ntBASIC1.46□□□□□ -2.18
NIPAL3Q6P499 MTND1P35-201ENST00000526739 508 ntBASIC1.46□□□□□ -2.18
NIPAL3Q6P499 RRN3P3-201ENST00000549207 578 ntBASIC1.46□□□□□ -2.18
NIPAL3Q6P499 DEFB122-202ENST00000569013 197 ntBASIC1.46□□□□□ -2.18
NIPAL3Q6P499 MIR4422-201ENST00000581938 83 ntBASIC1.46□□□□□ -2.18
NIPAL3Q6P499 AC010525.2-201ENST00000590920 195 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms