Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 RNU6-790P-201ENST00000384479 105 ntBASIC1.72□□□□□ -2.13
ZNF544Q6NX49 RNU6-601P-201ENST00000384540 107 ntBASIC1.72□□□□□ -2.13
ZNF544Q6NX49 RNU6-306P-201ENST00000384617 107 ntBASIC1.72□□□□□ -2.13
ZNF544Q6NX49 MIR583-201ENST00000384846 75 ntBASIC1.72□□□□□ -2.13
ZNF544Q6NX49 MIR521-1-201ENST00000384902 87 ntBASIC1.72□□□□□ -2.13
ZNF544Q6NX49 AL512604.1-201ENST00000404812 257 ntBASIC1.72□□□□□ -2.13
ZNF544Q6NX49 RNA5SP201-201ENST00000410316 124 ntBASIC1.72□□□□□ -2.13
ZNF544Q6NX49 RNU2-2P-201ENST00000410396 191 ntBASIC1.72□□□□□ -2.13
ZNF544Q6NX49 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.72□□□□□ -2.13
ZNF544Q6NX49 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.72□□□□□ -2.13
ZNF544Q6NX49 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.72□□□□□ -2.13
ZNF544Q6NX49 AL353752.1-201ENST00000454946 260 ntBASIC1.72□□□□□ -2.13
ZNF544Q6NX49 MTND4P17-201ENST00000470444 350 ntBASIC1.72□□□□□ -2.13
ZNF544Q6NX49 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.72□□□□□ -2.13
ZNF544Q6NX49 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.72□□□□□ -2.13
ZNF544Q6NX49 AC104564.1-201ENST00000493028 407 ntBASIC1.72□□□□□ -2.13
ZNF544Q6NX49 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.72□□□□□ -2.13
ZNF544Q6NX49 AC007375.1-201ENST00000554513 578 ntBASIC1.72□□□□□ -2.13
ZNF544Q6NX49 AC021231.3-201ENST00000558497 370 ntBASIC1.72□□□□□ -2.13
ZNF544Q6NX49 AC093249.1-201ENST00000567049 203 ntBASIC1.72□□□□□ -2.13
ZNF544Q6NX49 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.72□□□□□ -2.13
ZNF544Q6NX49 RPL30P11-203ENST00000598995 310 ntBASIC1.72□□□□□ -2.13
ZNF544Q6NX49 AL078605.1-201ENST00000603529 500 ntBASIC1.72□□□□□ -2.13
ZNF544Q6NX49 AL034555.1-201ENST00000604816 211 ntBASIC1.72□□□□□ -2.13
ZNF544Q6NX49 AC016727.1-205ENST00000605437 569 ntBASIC1.72□□□□□ -2.13
ZNF544Q6NX49 U2.15-201ENST00000611544 191 ntBASIC1.72□□□□□ -2.13
ZNF544Q6NX49 U2.16-201ENST00000613119 191 ntBASIC1.72□□□□□ -2.13
ZNF544Q6NX49 Y_RNA.783-201ENST00000613546 102 ntBASIC1.72□□□□□ -2.13
ZNF544Q6NX49 U2.12-201ENST00000613778 191 ntBASIC1.72□□□□□ -2.13
ZNF544Q6NX49 AC005520.5-201ENST00000613926 164 ntBASIC1.72□□□□□ -2.13
ZNF544Q6NX49 U2.20-201ENST00000613956 192 ntBASIC1.72□□□□□ -2.13
ZNF544Q6NX49 U2.9-201ENST00000615427 191 ntBASIC1.72□□□□□ -2.13
ZNF544Q6NX49 U2.11-201ENST00000616345 191 ntBASIC1.72□□□□□ -2.13
ZNF544Q6NX49 U2.2-201ENST00000616535 191 ntBASIC1.72□□□□□ -2.13
ZNF544Q6NX49 U2.3-201ENST00000617785 191 ntBASIC1.72□□□□□ -2.13
ZNF544Q6NX49 U2.19-201ENST00000618602 191 ntBASIC1.72□□□□□ -2.13
ZNF544Q6NX49 RNU2-1-201ENST00000618664 191 ntBASIC1.72□□□□□ -2.13
ZNF544Q6NX49 U2.6-201ENST00000619225 191 ntBASIC1.72□□□□□ -2.13
ZNF544Q6NX49 U2.5-201ENST00000619465 191 ntBASIC1.72□□□□□ -2.13
ZNF544Q6NX49 U2.10-201ENST00000620268 191 ntBASIC1.72□□□□□ -2.13
ZNF544Q6NX49 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.72□□□□□ -2.13
ZNF544Q6NX49 SNORD98-201ENST00000636377 67 ntBASIC1.72□□□□□ -2.13
ZNF544Q6NX49 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
ZNF544Q6NX49 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.71□□□□□ -2.14
ZNF544Q6NX49 AC009541.1-201ENST00000438279 2662 ntBASIC1.71□□□□□ -2.14
ZNF544Q6NX49 RNA5SP432-201ENST00000362480 116 ntBASIC1.71□□□□□ -2.14
ZNF544Q6NX49 Y_RNA.123-201ENST00000363338 102 ntBASIC1.71□□□□□ -2.14
ZNF544Q6NX49 Y_RNA.529-201ENST00000384586 119 ntBASIC1.71□□□□□ -2.14
ZNF544Q6NX49 U8.13-201ENST00000390842 128 ntBASIC1.71□□□□□ -2.14
ZNF544Q6NX49 SNORA26.9-201ENST00000391322 122 ntBASIC1.71□□□□□ -2.14
ZNF544Q6NX49 MTCYBP2-201ENST00000407745 171 ntBASIC1.71□□□□□ -2.14
ZNF544Q6NX49 Y_RNA.594-201ENST00000410373 140 ntBASIC1.71□□□□□ -2.14
ZNF544Q6NX49 RPS20P15-201ENST00000412792 311 ntBASIC1.71□□□□□ -2.14
ZNF544Q6NX49 RPS26P42-201ENST00000413485 326 ntBASIC1.71□□□□□ -2.14
ZNF544Q6NX49 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.71□□□□□ -2.14
ZNF544Q6NX49 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.71□□□□□ -2.14
ZNF544Q6NX49 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.71□□□□□ -2.14
ZNF544Q6NX49 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.71□□□□□ -2.14
ZNF544Q6NX49 MTND3P22-201ENST00000510932 243 ntBASIC1.71□□□□□ -2.14
ZNF544Q6NX49 AC005741.1-201ENST00000511094 432 ntBASIC1.71□□□□□ -2.14
ZNF544Q6NX49 SNORA31.16-201ENST00000516773 139 ntBASIC1.71□□□□□ -2.14
ZNF544Q6NX49 RNU6-295P-201ENST00000516901 104 ntBASIC1.71□□□□□ -2.14
ZNF544Q6NX49 Y_RNA.708-201ENST00000516950 96 ntBASIC1.71□□□□□ -2.14
ZNF544Q6NX49 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.71□□□□□ -2.14
ZNF544Q6NX49 AC018630.3-201ENST00000542637 96 ntBASIC1.71□□□□□ -2.14
ZNF544Q6NX49 RAB11AP2-201ENST00000545905 639 ntBASIC1.71□□□□□ -2.14
ZNF544Q6NX49 AC015712.3-201ENST00000559380 164 ntBASIC1.71□□□□□ -2.14
ZNF544Q6NX49 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.71□□□□□ -2.14
ZNF544Q6NX49 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.71□□□□□ -2.14
ZNF544Q6NX49 AP000654.2-201ENST00000605633 586 ntBASIC1.71□□□□□ -2.14
ZNF544Q6NX49 AC063943.3-201ENST00000615562 356 ntBASIC1.71□□□□□ -2.14
ZNF544Q6NX49 AC005296.1-201ENST00000616145 209 ntBASIC1.71□□□□□ -2.14
ZNF544Q6NX49 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.71□□□□□ -2.14
ZNF544Q6NX49 MTND5P9-201ENST00000503854 1755 ntBASIC1.7□□□□□ -2.14
ZNF544Q6NX49 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.7□□□□□ -2.14
ZNF544Q6NX49 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
ZNF544Q6NX49 AL356292.1-201ENST00000283110 373 ntBASIC1.7□□□□□ -2.14
ZNF544Q6NX49 RNU4-15P-201ENST00000362613 141 ntBASIC1.7□□□□□ -2.14
ZNF544Q6NX49 Y_RNA.387-201ENST00000383918 102 ntBASIC1.7□□□□□ -2.14
ZNF544Q6NX49 MIR29B2-201ENST00000385055 81 ntBASIC1.7□□□□□ -2.14
ZNF544Q6NX49 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
ZNF544Q6NX49 RNU6-1050P-201ENST00000410388 107 ntBASIC1.7□□□□□ -2.14
ZNF544Q6NX49 AL139156.1-201ENST00000412785 841 ntBASIC1.7□□□□□ -2.14
ZNF544Q6NX49 AC243428.1-201ENST00000421099 264 ntBASIC1.7□□□□□ -2.14
ZNF544Q6NX49 AL590135.1-201ENST00000422215 156 ntBASIC1.7□□□□□ -2.14
ZNF544Q6NX49 AC019205.3-201ENST00000424573 156 ntBASIC1.7□□□□□ -2.14
ZNF544Q6NX49 SNRPEP8-201ENST00000442866 260 ntBASIC1.7□□□□□ -2.14
ZNF544Q6NX49 AC016700.2-201ENST00000446011 156 ntBASIC1.7□□□□□ -2.14
ZNF544Q6NX49 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.7□□□□□ -2.14
ZNF544Q6NX49 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.7□□□□□ -2.14
ZNF544Q6NX49 AC015911.1-201ENST00000495111 156 ntBASIC1.7□□□□□ -2.14
ZNF544Q6NX49 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.7□□□□□ -2.14
ZNF544Q6NX49 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.7□□□□□ -2.14
ZNF544Q6NX49 Y_RNA.670-201ENST00000516255 105 ntBASIC1.7□□□□□ -2.14
ZNF544Q6NX49 RNU6-567P-201ENST00000516746 107 ntBASIC1.7□□□□□ -2.14
ZNF544Q6NX49 SNORA48.11-201ENST00000517015 89 ntBASIC1.7□□□□□ -2.14
ZNF544Q6NX49 RNU6-548P-201ENST00000517083 115 ntBASIC1.7□□□□□ -2.14
ZNF544Q6NX49 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.7□□□□□ -2.14
ZNF544Q6NX49 AC109446.1-201ENST00000566172 220 ntBASIC1.7□□□□□ -2.14
ZNF544Q6NX49 MIR4529-201ENST00000578110 78 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms