Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 NCOR1P3-201ENST00000420479 303 ntBASIC2.28□□□□□ -2.04
ALFQ53S48 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.28□□□□□ -2.04
ALFQ53S48 MTCO1P44-201ENST00000441935 243 ntBASIC2.28□□□□□ -2.04
ALFQ53S48 AC074290.1-201ENST00000448883 135 ntBASIC2.28□□□□□ -2.04
ALFQ53S48 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.28□□□□□ -2.04
ALFQ53S48 RNU6-329P-201ENST00000459618 107 ntBASIC2.28□□□□□ -2.04
ALFQ53S48 TRBV12-1-201ENST00000479785 344 ntBASIC2.28□□□□□ -2.04
ALFQ53S48 FO393415.2-201ENST00000480085 343 ntBASIC2.28□□□□□ -2.04
ALFQ53S48 AC097473.1-201ENST00000508142 408 ntBASIC2.28□□□□□ -2.04
ALFQ53S48 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.28□□□□□ -2.04
ALFQ53S48 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.28□□□□□ -2.04
ALFQ53S48 RNU2-34P-201ENST00000516534 121 ntBASIC2.28□□□□□ -2.04
ALFQ53S48 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.28□□□□□ -2.04
ALFQ53S48 RRN3P3-201ENST00000549207 578 ntBASIC2.28□□□□□ -2.04
ALFQ53S48 AC026464.5-201ENST00000562497 722 ntBASIC2.28□□□□□ -2.04
ALFQ53S48 MIR4713-201ENST00000582691 75 ntBASIC2.28□□□□□ -2.04
ALFQ53S48 AC010928.2-201ENST00000588017 287 ntBASIC2.28□□□□□ -2.04
ALFQ53S48 AC013412.1-201ENST00000610687 192 ntBASIC2.28□□□□□ -2.04
ALFQ53S48 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
ALFQ53S48 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
ALFQ53S48 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.27□□□□□ -2.05
ALFQ53S48 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
ALFQ53S48 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
ALFQ53S48 RNU6-596P-201ENST00000365395 98 ntBASIC2.27□□□□□ -2.05
ALFQ53S48 Y_RNA.505-201ENST00000384489 102 ntBASIC2.27□□□□□ -2.05
ALFQ53S48 SNORA11.2-201ENST00000408318 127 ntBASIC2.27□□□□□ -2.05
ALFQ53S48 Z82188.1-201ENST00000436709 154 ntBASIC2.27□□□□□ -2.05
ALFQ53S48 FGF7P6-202ENST00000451282 293 ntBASIC2.27□□□□□ -2.05
ALFQ53S48 AC069439.1-201ENST00000494739 167 ntBASIC2.27□□□□□ -2.05
ALFQ53S48 YWHAEP4-201ENST00000505390 198 ntBASIC2.27□□□□□ -2.05
ALFQ53S48 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.27□□□□□ -2.05
ALFQ53S48 Y_RNA.682-201ENST00000516457 100 ntBASIC2.27□□□□□ -2.05
ALFQ53S48 RNU6-358P-201ENST00000516564 75 ntBASIC2.27□□□□□ -2.05
ALFQ53S48 MTND4LP26-201ENST00000518144 282 ntBASIC2.27□□□□□ -2.05
ALFQ53S48 SNRPGP18-201ENST00000553000 214 ntBASIC2.27□□□□□ -2.05
ALFQ53S48 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.27□□□□□ -2.05
ALFQ53S48 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.27□□□□□ -2.05
ALFQ53S48 MIR4742-201ENST00000581069 85 ntBASIC2.27□□□□□ -2.05
ALFQ53S48 AC011712.1-201ENST00000588959 234 ntBASIC2.27□□□□□ -2.05
ALFQ53S48 AC092794.1-201ENST00000612734 582 ntBASIC2.27□□□□□ -2.05
ALFQ53S48 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.27□□□□□ -2.05
ALFQ53S48 Y_RNA.72-201ENST00000362894 103 ntBASIC2.26□□□□□ -2.05
ALFQ53S48 Y_RNA.319-201ENST00000365138 92 ntBASIC2.26□□□□□ -2.05
ALFQ53S48 RNU6-418P-201ENST00000384035 107 ntBASIC2.26□□□□□ -2.05
ALFQ53S48 RNU6-541P-201ENST00000384709 110 ntBASIC2.26□□□□□ -2.05
ALFQ53S48 MIR487A-201ENST00000385009 80 ntBASIC2.26□□□□□ -2.05
ALFQ53S48 RNA5SP425-201ENST00000410336 112 ntBASIC2.26□□□□□ -2.05
ALFQ53S48 AL356320.1-201ENST00000429616 163 ntBASIC2.26□□□□□ -2.05
ALFQ53S48 ATP5J2P3-201ENST00000451550 258 ntBASIC2.26□□□□□ -2.05
ALFQ53S48 RN7SL429P-201ENST00000479090 223 ntBASIC2.26□□□□□ -2.05
ALFQ53S48 RN7SL489P-201ENST00000486185 223 ntBASIC2.26□□□□□ -2.05
ALFQ53S48 RN7SL327P-201ENST00000488659 223 ntBASIC2.26□□□□□ -2.05
ALFQ53S48 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.26□□□□□ -2.05
ALFQ53S48 AC018710.1-201ENST00000506509 158 ntBASIC2.26□□□□□ -2.05
ALFQ53S48 RNU1-41P-201ENST00000516161 162 ntBASIC2.26□□□□□ -2.05
ALFQ53S48 RNU1-48P-201ENST00000516400 162 ntBASIC2.26□□□□□ -2.05
ALFQ53S48 AC084782.3-201ENST00000612282 578 ntBASIC2.26□□□□□ -2.05
ALFQ53S48 RN7SL853P-201ENST00000617250 223 ntBASIC2.26□□□□□ -2.05
ALFQ53S48 AC009831.4-201ENST00000620744 325 ntBASIC2.26□□□□□ -2.05
ALFQ53S48 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
ALFQ53S48 KPNA2P1-201ENST00000458289 1591 ntBASIC2.25□□□□□ -2.05
ALFQ53S48 SNORD115-8-201ENST00000363856 82 ntBASIC2.25□□□□□ -2.05
ALFQ53S48 RNU6-1305P-201ENST00000364353 104 ntBASIC2.25□□□□□ -2.05
ALFQ53S48 SNORD115-38-201ENST00000365037 82 ntBASIC2.25□□□□□ -2.05
ALFQ53S48 RNU6-245P-201ENST00000384020 107 ntBASIC2.25□□□□□ -2.05
ALFQ53S48 AL356776.1-201ENST00000406574 447 ntBASIC2.25□□□□□ -2.05
ALFQ53S48 SNORA11.4-201ENST00000408823 129 ntBASIC2.25□□□□□ -2.05
ALFQ53S48 MTND3P8-201ENST00000412909 339 ntBASIC2.25□□□□□ -2.05
ALFQ53S48 AC009310.1-201ENST00000414414 451 ntBASIC2.25□□□□□ -2.05
ALFQ53S48 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.25□□□□□ -2.05
ALFQ53S48 HMGB1P18-201ENST00000438801 619 ntBASIC2.25□□□□□ -2.05
ALFQ53S48 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.25□□□□□ -2.05
ALFQ53S48 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.25□□□□□ -2.05
ALFQ53S48 AC116337.1-201ENST00000509680 687 ntBASIC2.25□□□□□ -2.05
ALFQ53S48 AC067942.3-201ENST00000512025 362 ntBASIC2.25□□□□□ -2.05
ALFQ53S48 RNU6-948P-201ENST00000516374 107 ntBASIC2.25□□□□□ -2.05
ALFQ53S48 RNU6-856P-201ENST00000516959 98 ntBASIC2.25□□□□□ -2.05
ALFQ53S48 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.25□□□□□ -2.05
ALFQ53S48 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.25□□□□□ -2.05
ALFQ53S48 MIR5696-201ENST00000578474 85 ntBASIC2.25□□□□□ -2.05
ALFQ53S48 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.25□□□□□ -2.05
ALFQ53S48 MIR6873-201ENST00000622788 63 ntBASIC2.25□□□□□ -2.05
ALFQ53S48 AC005336.3-201ENST00000623833 2679 ntBASIC2.24□□□□□ -2.05
ALFQ53S48 AC004866.1-201ENST00000411748 78 ntBASIC2.24□□□□□ -2.05
ALFQ53S48 AL135786.1-201ENST00000415892 214 ntBASIC2.24□□□□□ -2.05
ALFQ53S48 USP9YP30-201ENST00000430729 455 ntBASIC2.24□□□□□ -2.05
ALFQ53S48 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.24□□□□□ -2.05
ALFQ53S48 MTND5P5-201ENST00000503764 376 ntBASIC2.24□□□□□ -2.05
ALFQ53S48 RNA5SP200-201ENST00000516360 103 ntBASIC2.24□□□□□ -2.05
ALFQ53S48 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.24□□□□□ -2.05
ALFQ53S48 AC022254.1-201ENST00000567857 235 ntBASIC2.24□□□□□ -2.05
ALFQ53S48 MIR1273D-201ENST00000577266 86 ntBASIC2.24□□□□□ -2.05
ALFQ53S48 MIR5094-201ENST00000578766 85 ntBASIC2.24□□□□□ -2.05
ALFQ53S48 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.24□□□□□ -2.05
ALFQ53S48 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.24□□□□□ -2.05
ALFQ53S48 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.24□□□□□ -2.05
ALFQ53S48 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.24□□□□□ -2.05
ALFQ53S48 AC022513.1-201ENST00000624512 117 ntBASIC2.24□□□□□ -2.05
ALFQ53S48 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.24□□□□□ -2.05
ALFQ53S48 ZNF299P-201ENST00000406845 1804 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 578 ms