Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 MIR219B-201ENST00000637023 88 ntBASIC2.37□□□□□ -2.03
USP41Q3LFD5 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
USP41Q3LFD5 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.36□□□□□ -2.03
USP41Q3LFD5 RNY1P16-201ENST00000363063 111 ntBASIC2.36□□□□□ -2.03
USP41Q3LFD5 U3.9-201ENST00000363823 204 ntBASIC2.36□□□□□ -2.03
USP41Q3LFD5 RNU6-595P-201ENST00000363944 107 ntBASIC2.36□□□□□ -2.03
USP41Q3LFD5 RNU6-890P-201ENST00000384121 107 ntBASIC2.36□□□□□ -2.03
USP41Q3LFD5 SNORA64-201ENST00000384674 134 ntBASIC2.36□□□□□ -2.03
USP41Q3LFD5 MIR144-201ENST00000384886 86 ntBASIC2.36□□□□□ -2.03
USP41Q3LFD5 MIR95-201ENST00000385072 81 ntBASIC2.36□□□□□ -2.03
USP41Q3LFD5 MIR1289-2-201ENST00000408360 111 ntBASIC2.36□□□□□ -2.03
USP41Q3LFD5 RNA5SP201-201ENST00000410316 124 ntBASIC2.36□□□□□ -2.03
USP41Q3LFD5 RNU2-32P-201ENST00000411193 191 ntBASIC2.36□□□□□ -2.03
USP41Q3LFD5 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.36□□□□□ -2.03
USP41Q3LFD5 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.36□□□□□ -2.03
USP41Q3LFD5 HMGB3P3-201ENST00000510526 400 ntBASIC2.36□□□□□ -2.03
USP41Q3LFD5 RNA5SP200-201ENST00000516360 103 ntBASIC2.36□□□□□ -2.03
USP41Q3LFD5 AL590705.4-201ENST00000532209 134 ntBASIC2.36□□□□□ -2.03
USP41Q3LFD5 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.36□□□□□ -2.03
USP41Q3LFD5 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.36□□□□□ -2.03
USP41Q3LFD5 PCGEM1.1-201ENST00000613431 131 ntBASIC2.36□□□□□ -2.03
USP41Q3LFD5 AC133104.2-201ENST00000615272 193 ntBASIC2.36□□□□□ -2.03
USP41Q3LFD5 AC126177.8-201ENST00000618339 1015 ntBASIC2.36□□□□□ -2.03
USP41Q3LFD5 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
USP41Q3LFD5 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
USP41Q3LFD5 AC092881.1-201ENST00000638218 2733 ntBASIC2.35□□□□□ -2.03
USP41Q3LFD5 Y_RNA.405-201ENST00000383979 100 ntBASIC2.35□□□□□ -2.03
USP41Q3LFD5 RNU6-546P-201ENST00000383991 107 ntBASIC2.35□□□□□ -2.03
USP41Q3LFD5 Y_RNA.451-201ENST00000384200 100 ntBASIC2.35□□□□□ -2.03
USP41Q3LFD5 Y_RNA.524-201ENST00000384564 100 ntBASIC2.35□□□□□ -2.03
USP41Q3LFD5 Y_RNA.561-201ENST00000384694 100 ntBASIC2.35□□□□□ -2.03
USP41Q3LFD5 MIR487A-201ENST00000385009 80 ntBASIC2.35□□□□□ -2.03
USP41Q3LFD5 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.35□□□□□ -2.03
USP41Q3LFD5 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.35□□□□□ -2.03
USP41Q3LFD5 WARS2P1-201ENST00000429678 537 ntBASIC2.35□□□□□ -2.03
USP41Q3LFD5 MTND3P23-201ENST00000431980 347 ntBASIC2.35□□□□□ -2.03
USP41Q3LFD5 MTCO3P29-201ENST00000432119 779 ntBASIC2.35□□□□□ -2.03
USP41Q3LFD5 OR2AQ1P-201ENST00000451972 200 ntBASIC2.35□□□□□ -2.03
USP41Q3LFD5 snoU13.30-201ENST00000458951 104 ntBASIC2.35□□□□□ -2.03
USP41Q3LFD5 RN7SKP210-201ENST00000459176 261 ntBASIC2.35□□□□□ -2.03
USP41Q3LFD5 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.35□□□□□ -2.03
USP41Q3LFD5 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.35□□□□□ -2.03
USP41Q3LFD5 MIR449C-201ENST00000516047 92 ntBASIC2.35□□□□□ -2.03
USP41Q3LFD5 RNU6-120P-201ENST00000516077 103 ntBASIC2.35□□□□□ -2.03
USP41Q3LFD5 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.35□□□□□ -2.03
USP41Q3LFD5 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.35□□□□□ -2.03
USP41Q3LFD5 EIF4A1P12-201ENST00000551910 141 ntBASIC2.35□□□□□ -2.03
USP41Q3LFD5 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.35□□□□□ -2.03
USP41Q3LFD5 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.35□□□□□ -2.03
USP41Q3LFD5 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.35□□□□□ -2.03
USP41Q3LFD5 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.35□□□□□ -2.03
USP41Q3LFD5 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.35□□□□□ -2.03
USP41Q3LFD5 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.35□□□□□ -2.03
USP41Q3LFD5 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.35□□□□□ -2.03
USP41Q3LFD5 Z82209.1-201ENST00000422141 2135 ntBASIC2.35□□□□□ -2.03
USP41Q3LFD5 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
USP41Q3LFD5 AC009487.4-201ENST00000624969 3585 ntBASIC2.34□□□□□ -2.03
USP41Q3LFD5 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
USP41Q3LFD5 MIR561-201ENST00000385216 97 ntBASIC2.34□□□□□ -2.03
USP41Q3LFD5 MIR549A-201ENST00000385268 96 ntBASIC2.34□□□□□ -2.03
USP41Q3LFD5 SNORA75.6-201ENST00000391318 127 ntBASIC2.34□□□□□ -2.03
USP41Q3LFD5 MIR1294-201ENST00000408503 142 ntBASIC2.34□□□□□ -2.03
USP41Q3LFD5 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.34□□□□□ -2.03
USP41Q3LFD5 snoU13.23-201ENST00000458863 104 ntBASIC2.34□□□□□ -2.03
USP41Q3LFD5 TOMM22P6-201ENST00000465035 409 ntBASIC2.34□□□□□ -2.03
USP41Q3LFD5 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.34□□□□□ -2.03
USP41Q3LFD5 RPL30P10-201ENST00000488148 337 ntBASIC2.34□□□□□ -2.03
USP41Q3LFD5 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.34□□□□□ -2.03
USP41Q3LFD5 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.34□□□□□ -2.03
USP41Q3LFD5 RNU7-175P-201ENST00000515915 61 ntBASIC2.34□□□□□ -2.03
USP41Q3LFD5 RNU6-264P-201ENST00000517134 104 ntBASIC2.34□□□□□ -2.03
USP41Q3LFD5 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.34□□□□□ -2.03
USP41Q3LFD5 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.34□□□□□ -2.03
USP41Q3LFD5 MIR6895-201ENST00000613497 78 ntBASIC2.34□□□□□ -2.03
USP41Q3LFD5 AC005520.5-201ENST00000613926 164 ntBASIC2.34□□□□□ -2.03
USP41Q3LFD5 AC137590.2-201ENST00000619709 240 ntBASIC2.34□□□□□ -2.03
USP41Q3LFD5 AC009831.4-201ENST00000620744 325 ntBASIC2.34□□□□□ -2.03
USP41Q3LFD5 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.34□□□□□ -2.03
USP41Q3LFD5 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
USP41Q3LFD5 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.04
USP41Q3LFD5 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
USP41Q3LFD5 Y_RNA.61-201ENST00000362835 102 ntBASIC2.33□□□□□ -2.04
USP41Q3LFD5 RNU6-797P-201ENST00000363101 109 ntBASIC2.33□□□□□ -2.04
USP41Q3LFD5 RNU6-743P-201ENST00000364151 106 ntBASIC2.33□□□□□ -2.04
USP41Q3LFD5 SNORD32B-201ENST00000364460 84 ntBASIC2.33□□□□□ -2.04
USP41Q3LFD5 RNU1-51P-201ENST00000365345 176 ntBASIC2.33□□□□□ -2.04
USP41Q3LFD5 Y_RNA.509-201ENST00000384506 99 ntBASIC2.33□□□□□ -2.04
USP41Q3LFD5 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.33□□□□□ -2.04
USP41Q3LFD5 CBX3P6-201ENST00000430257 527 ntBASIC2.33□□□□□ -2.04
USP41Q3LFD5 AC009238.1-201ENST00000442165 424 ntBASIC2.33□□□□□ -2.04
USP41Q3LFD5 AC009237.6-201ENST00000446969 424 ntBASIC2.33□□□□□ -2.04
USP41Q3LFD5 ELOCP24-201ENST00000456370 334 ntBASIC2.33□□□□□ -2.04
USP41Q3LFD5 AC068781.1-201ENST00000488231 618 ntBASIC2.33□□□□□ -2.04
USP41Q3LFD5 AC022493.2-201ENST00000506122 481 ntBASIC2.33□□□□□ -2.04
USP41Q3LFD5 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.33□□□□□ -2.04
USP41Q3LFD5 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.33□□□□□ -2.04
USP41Q3LFD5 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.33□□□□□ -2.04
USP41Q3LFD5 AC093303.1-201ENST00000514549 295 ntBASIC2.33□□□□□ -2.04
USP41Q3LFD5 SCARNA16.3-201ENST00000516595 184 ntBASIC2.33□□□□□ -2.04
USP41Q3LFD5 DEFB122-202ENST00000569013 197 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms