Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 Y_RNA.524-201ENST00000384564 100 ntBASIC2.06□□□□□ -2.08
SNAI3Q3KNW1 RNU6-1222P-201ENST00000384615 107 ntBASIC2.06□□□□□ -2.08
SNAI3Q3KNW1 Y_RNA.561-201ENST00000384694 100 ntBASIC2.06□□□□□ -2.08
SNAI3Q3KNW1 RNU6-823P-201ENST00000391042 103 ntBASIC2.06□□□□□ -2.08
SNAI3Q3KNW1 MIR190B-201ENST00000401119 79 ntBASIC2.06□□□□□ -2.08
SNAI3Q3KNW1 MIR548F4-201ENST00000408515 105 ntBASIC2.06□□□□□ -2.08
SNAI3Q3KNW1 RN7SKP61-201ENST00000410642 295 ntBASIC2.06□□□□□ -2.08
SNAI3Q3KNW1 EIF1AXP1-201ENST00000419267 435 ntBASIC2.06□□□□□ -2.08
SNAI3Q3KNW1 AL358453.1-201ENST00000422522 250 ntBASIC2.06□□□□□ -2.08
SNAI3Q3KNW1 AC092423.1-201ENST00000430165 186 ntBASIC2.06□□□□□ -2.08
SNAI3Q3KNW1 MTCO3P29-201ENST00000432119 779 ntBASIC2.06□□□□□ -2.08
SNAI3Q3KNW1 AL049873.1-201ENST00000480540 376 ntBASIC2.06□□□□□ -2.08
SNAI3Q3KNW1 AC104564.1-201ENST00000493028 407 ntBASIC2.06□□□□□ -2.08
SNAI3Q3KNW1 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.06□□□□□ -2.08
SNAI3Q3KNW1 AC026436.1-201ENST00000510537 270 ntBASIC2.06□□□□□ -2.08
SNAI3Q3KNW1 Y_RNA.721-201ENST00000517207 102 ntBASIC2.06□□□□□ -2.08
SNAI3Q3KNW1 AC016256.1-201ENST00000547971 354 ntBASIC2.06□□□□□ -2.08
SNAI3Q3KNW1 AL117187.1-201ENST00000555482 181 ntBASIC2.06□□□□□ -2.08
SNAI3Q3KNW1 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.06□□□□□ -2.08
SNAI3Q3KNW1 AC010928.2-201ENST00000588017 287 ntBASIC2.06□□□□□ -2.08
SNAI3Q3KNW1 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.06□□□□□ -2.08
SNAI3Q3KNW1 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
SNAI3Q3KNW1 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
SNAI3Q3KNW1 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SNAI3Q3KNW1 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SNAI3Q3KNW1 OR56A5-201ENST00000340110 738 ntBASIC2.05□□□□□ -2.08
SNAI3Q3KNW1 RNU5B-2P-201ENST00000363036 113 ntBASIC2.05□□□□□ -2.08
SNAI3Q3KNW1 RNU6-1285P-201ENST00000363480 105 ntBASIC2.05□□□□□ -2.08
SNAI3Q3KNW1 SNORD114-30-201ENST00000364448 72 ntBASIC2.05□□□□□ -2.08
SNAI3Q3KNW1 RNU1-91P-201ENST00000364746 163 ntBASIC2.05□□□□□ -2.08
SNAI3Q3KNW1 RNU4-9P-201ENST00000364951 139 ntBASIC2.05□□□□□ -2.08
SNAI3Q3KNW1 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
SNAI3Q3KNW1 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
SNAI3Q3KNW1 Y_RNA.605-201ENST00000410577 105 ntBASIC2.05□□□□□ -2.08
SNAI3Q3KNW1 RNU2-63P-201ENST00000410792 194 ntBASIC2.05□□□□□ -2.08
SNAI3Q3KNW1 HMGB3P2-201ENST00000411913 584 ntBASIC2.05□□□□□ -2.08
SNAI3Q3KNW1 AC009963.1-201ENST00000417265 157 ntBASIC2.05□□□□□ -2.08
SNAI3Q3KNW1 AC078809.1-201ENST00000427601 140 ntBASIC2.05□□□□□ -2.08
SNAI3Q3KNW1 Z82188.1-201ENST00000436709 154 ntBASIC2.05□□□□□ -2.08
SNAI3Q3KNW1 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.05□□□□□ -2.08
SNAI3Q3KNW1 RPL39P29-201ENST00000447779 157 ntBASIC2.05□□□□□ -2.08
SNAI3Q3KNW1 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.05□□□□□ -2.08
SNAI3Q3KNW1 AC012308.1-201ENST00000451232 178 ntBASIC2.05□□□□□ -2.08
SNAI3Q3KNW1 snoU13.30-201ENST00000458951 104 ntBASIC2.05□□□□□ -2.08
SNAI3Q3KNW1 U8.20-201ENST00000459445 131 ntBASIC2.05□□□□□ -2.08
SNAI3Q3KNW1 RNU7-175P-201ENST00000515915 61 ntBASIC2.05□□□□□ -2.08
SNAI3Q3KNW1 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.05□□□□□ -2.08
SNAI3Q3KNW1 HSPE1P4-201ENST00000550617 308 ntBASIC2.05□□□□□ -2.08
SNAI3Q3KNW1 HSBP1P1-201ENST00000555205 166 ntBASIC2.05□□□□□ -2.08
SNAI3Q3KNW1 AC113195.1-201ENST00000579952 141 ntBASIC2.05□□□□□ -2.08
SNAI3Q3KNW1 RPS15AP11-201ENST00000594193 385 ntBASIC2.05□□□□□ -2.08
SNAI3Q3KNW1 VN1R91P-201ENST00000594377 169 ntBASIC2.05□□□□□ -2.08
SNAI3Q3KNW1 7SK.7-201ENST00000603504 247 ntBASIC2.05□□□□□ -2.08
SNAI3Q3KNW1 AC016727.2-201ENST00000603988 621 ntBASIC2.05□□□□□ -2.08
SNAI3Q3KNW1 AL355297.2-201ENST00000604792 129 ntBASIC2.05□□□□□ -2.08
SNAI3Q3KNW1 AC103810.6-201ENST00000606708 136 ntBASIC2.05□□□□□ -2.08
SNAI3Q3KNW1 AC100812.1-201ENST00000607622 580 ntBASIC2.05□□□□□ -2.08
SNAI3Q3KNW1 RNU6-91P-201ENST00000607774 107 ntBASIC2.05□□□□□ -2.08
SNAI3Q3KNW1 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.05□□□□□ -2.08
SNAI3Q3KNW1 AL138825.1-201ENST00000618587 192 ntBASIC2.05□□□□□ -2.08
SNAI3Q3KNW1 MIR5739-201ENST00000619803 80 ntBASIC2.05□□□□□ -2.08
SNAI3Q3KNW1 AL078596.1-201ENST00000624856 447 ntBASIC2.05□□□□□ -2.08
SNAI3Q3KNW1 SCARNA4-201ENST00000629045 128 ntBASIC2.05□□□□□ -2.08
SNAI3Q3KNW1 AL450472.1-202ENST00000637286 180 ntBASIC2.05□□□□□ -2.08
SNAI3Q3KNW1 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.05□□□□□ -2.08
SNAI3Q3KNW1 AC016717.2-201ENST00000609089 5141 ntBASIC2.04□□□□□ -2.08
SNAI3Q3KNW1 AC002543.1-201ENST00000299783 1954 ntBASIC2.04□□□□□ -2.08
SNAI3Q3KNW1 RNU1-72P-201ENST00000362976 153 ntBASIC2.04□□□□□ -2.08
SNAI3Q3KNW1 Y_RNA.153-201ENST00000363615 91 ntBASIC2.04□□□□□ -2.08
SNAI3Q3KNW1 Y_RNA.389-201ENST00000383924 113 ntBASIC2.04□□□□□ -2.08
SNAI3Q3KNW1 RNU6-142P-201ENST00000384019 107 ntBASIC2.04□□□□□ -2.08
SNAI3Q3KNW1 SNORA29-201ENST00000384183 140 ntBASIC2.04□□□□□ -2.08
SNAI3Q3KNW1 SNORA69.1-201ENST00000390904 137 ntBASIC2.04□□□□□ -2.08
SNAI3Q3KNW1 Y_RNA.592-201ENST00000410274 109 ntBASIC2.04□□□□□ -2.08
SNAI3Q3KNW1 RNU6-1140P-201ENST00000410517 106 ntBASIC2.04□□□□□ -2.08
SNAI3Q3KNW1 AC138623.1-201ENST00000418060 216 ntBASIC2.04□□□□□ -2.08
SNAI3Q3KNW1 ZNF72P-201ENST00000425869 1908 ntBASIC2.04□□□□□ -2.08
SNAI3Q3KNW1 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.04□□□□□ -2.08
SNAI3Q3KNW1 AL353705.4-201ENST00000449661 238 ntBASIC2.04□□□□□ -2.08
SNAI3Q3KNW1 RNU7-169P-201ENST00000459456 61 ntBASIC2.04□□□□□ -2.08
SNAI3Q3KNW1 RPL30P12-201ENST00000474666 353 ntBASIC2.04□□□□□ -2.08
SNAI3Q3KNW1 AF186996.7-201ENST00000492781 209 ntBASIC2.04□□□□□ -2.08
SNAI3Q3KNW1 AC093852.1-201ENST00000503587 266 ntBASIC2.04□□□□□ -2.08
SNAI3Q3KNW1 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.04□□□□□ -2.08
SNAI3Q3KNW1 AC016632.1-201ENST00000503994 196 ntBASIC2.04□□□□□ -2.08
SNAI3Q3KNW1 AC234781.5-201ENST00000508429 271 ntBASIC2.04□□□□□ -2.08
SNAI3Q3KNW1 AC107222.1-201ENST00000510899 637 ntBASIC2.04□□□□□ -2.08
SNAI3Q3KNW1 RNU6-911P-201ENST00000516523 104 ntBASIC2.04□□□□□ -2.08
SNAI3Q3KNW1 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.04□□□□□ -2.08
SNAI3Q3KNW1 AC022616.4-201ENST00000522985 181 ntBASIC2.04□□□□□ -2.08
SNAI3Q3KNW1 AC021269.2-201ENST00000532318 330 ntBASIC2.04□□□□□ -2.08
SNAI3Q3KNW1 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.04□□□□□ -2.08
SNAI3Q3KNW1 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.04□□□□□ -2.08
SNAI3Q3KNW1 AC046143.2-201ENST00000609789 160 ntBASIC2.04□□□□□ -2.08
SNAI3Q3KNW1 U2.1-201ENST00000618978 145 ntBASIC2.04□□□□□ -2.08
SNAI3Q3KNW1 AL159153.1-201ENST00000619688 317 ntBASIC2.04□□□□□ -2.08
SNAI3Q3KNW1 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
SNAI3Q3KNW1 AP000560.1-201ENST00000624150 1937 ntBASIC2.03□□□□□ -2.08
SNAI3Q3KNW1 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SNAI3Q3KNW1 Y_RNA.106-201ENST00000363189 100 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 166.5 ms