Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 snoU2_19.1-201ENST00000362361 80 ntBASIC2.75□□□□□ -1.97
PTCHD3Q3KNS1 Y_RNA.144-201ENST00000363521 113 ntBASIC2.75□□□□□ -1.97
PTCHD3Q3KNS1 RNU6-879P-201ENST00000364328 108 ntBASIC2.75□□□□□ -1.97
PTCHD3Q3KNS1 RNU6-708P-201ENST00000384217 107 ntBASIC2.75□□□□□ -1.97
PTCHD3Q3KNS1 RNU6-1145P-201ENST00000384246 107 ntBASIC2.75□□□□□ -1.97
PTCHD3Q3KNS1 RNU6-318P-201ENST00000384283 103 ntBASIC2.75□□□□□ -1.97
PTCHD3Q3KNS1 Y_RNA.471-201ENST00000384312 102 ntBASIC2.75□□□□□ -1.97
PTCHD3Q3KNS1 Y_RNA.500-201ENST00000384466 111 ntBASIC2.75□□□□□ -1.97
PTCHD3Q3KNS1 SNORD78.2-201ENST00000391076 69 ntBASIC2.75□□□□□ -1.97
PTCHD3Q3KNS1 MIR887-201ENST00000401258 79 ntBASIC2.75□□□□□ -1.97
PTCHD3Q3KNS1 SNORA11.2-201ENST00000408318 127 ntBASIC2.75□□□□□ -1.97
PTCHD3Q3KNS1 RPEP5-201ENST00000441137 268 ntBASIC2.75□□□□□ -1.97
PTCHD3Q3KNS1 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.75□□□□□ -1.97
PTCHD3Q3KNS1 AC073901.1-201ENST00000462471 408 ntBASIC2.75□□□□□ -1.97
PTCHD3Q3KNS1 MTATP8P1-201ENST00000467115 207 ntBASIC2.75□□□□□ -1.97
PTCHD3Q3KNS1 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.75□□□□□ -1.97
PTCHD3Q3KNS1 AC010469.2-201ENST00000496412 480 ntBASIC2.75□□□□□ -1.97
PTCHD3Q3KNS1 MRPS35P2-201ENST00000508242 191 ntBASIC2.75□□□□□ -1.97
PTCHD3Q3KNS1 AC067942.3-201ENST00000512025 362 ntBASIC2.75□□□□□ -1.97
PTCHD3Q3KNS1 RNA5SP356-201ENST00000515972 94 ntBASIC2.75□□□□□ -1.97
PTCHD3Q3KNS1 RN7SKP132-201ENST00000516001 208 ntBASIC2.75□□□□□ -1.97
PTCHD3Q3KNS1 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.75□□□□□ -1.97
PTCHD3Q3KNS1 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.75□□□□□ -1.97
PTCHD3Q3KNS1 UBL5P4-201ENST00000562584 236 ntBASIC2.75□□□□□ -1.97
PTCHD3Q3KNS1 AC125232.2-201ENST00000592457 143 ntBASIC2.75□□□□□ -1.97
PTCHD3Q3KNS1 AL670379.2-201ENST00000604983 252 ntBASIC2.75□□□□□ -1.97
PTCHD3Q3KNS1 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
PTCHD3Q3KNS1 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.75□□□□□ -1.97
PTCHD3Q3KNS1 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
PTCHD3Q3KNS1 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.74□□□□□ -1.97
PTCHD3Q3KNS1 RNU1-62P-201ENST00000362599 164 ntBASIC2.74□□□□□ -1.97
PTCHD3Q3KNS1 Y_RNA.574-201ENST00000384766 95 ntBASIC2.74□□□□□ -1.97
PTCHD3Q3KNS1 MIR329-1-201ENST00000385028 80 ntBASIC2.74□□□□□ -1.97
PTCHD3Q3KNS1 SNORA46.1-201ENST00000391069 153 ntBASIC2.74□□□□□ -1.97
PTCHD3Q3KNS1 MRPL35P1-201ENST00000404272 572 ntBASIC2.74□□□□□ -1.97
PTCHD3Q3KNS1 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.74□□□□□ -1.97
PTCHD3Q3KNS1 AC105272.1-201ENST00000438604 198 ntBASIC2.74□□□□□ -1.97
PTCHD3Q3KNS1 RN7SL499P-201ENST00000481141 276 ntBASIC2.74□□□□□ -1.97
PTCHD3Q3KNS1 AC093023.1-201ENST00000547375 507 ntBASIC2.74□□□□□ -1.97
PTCHD3Q3KNS1 MIR5695-201ENST00000579717 85 ntBASIC2.74□□□□□ -1.97
PTCHD3Q3KNS1 AC069294.1-201ENST00000608397 350 ntBASIC2.74□□□□□ -1.97
PTCHD3Q3KNS1 7SK.10-201ENST00000621414 298 ntBASIC2.74□□□□□ -1.97
PTCHD3Q3KNS1 U6.92-201ENST00000636464 89 ntBASIC2.74□□□□□ -1.97
PTCHD3Q3KNS1 ZNF204P-201ENST00000416749 2397 ntBASIC2.74□□□□□ -1.97
PTCHD3Q3KNS1 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
PTCHD3Q3KNS1 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
PTCHD3Q3KNS1 Y_RNA.47-201ENST00000362697 108 ntBASIC2.73□□□□□ -1.97
PTCHD3Q3KNS1 RNU1-72P-201ENST00000362976 153 ntBASIC2.73□□□□□ -1.97
PTCHD3Q3KNS1 RNU6-873P-201ENST00000363833 107 ntBASIC2.73□□□□□ -1.97
PTCHD3Q3KNS1 Y_RNA.183-201ENST00000363882 113 ntBASIC2.73□□□□□ -1.97
PTCHD3Q3KNS1 Y_RNA.210-201ENST00000364161 110 ntBASIC2.73□□□□□ -1.97
PTCHD3Q3KNS1 RPL21P1-201ENST00000399532 476 ntBASIC2.73□□□□□ -1.97
PTCHD3Q3KNS1 AL590004.2-201ENST00000404787 371 ntBASIC2.73□□□□□ -1.97
PTCHD3Q3KNS1 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.73□□□□□ -1.97
PTCHD3Q3KNS1 AC003982.1-202ENST00000469928 248 ntBASIC2.73□□□□□ -1.97
PTCHD3Q3KNS1 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.73□□□□□ -1.97
PTCHD3Q3KNS1 RPL23AP94-201ENST00000512518 302 ntBASIC2.73□□□□□ -1.97
PTCHD3Q3KNS1 SNORA25.14-201ENST00000516481 132 ntBASIC2.73□□□□□ -1.97
PTCHD3Q3KNS1 RNU6-635P-201ENST00000516651 102 ntBASIC2.73□□□□□ -1.97
PTCHD3Q3KNS1 AC007536.1-201ENST00000533382 349 ntBASIC2.73□□□□□ -1.97
PTCHD3Q3KNS1 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.73□□□□□ -1.97
PTCHD3Q3KNS1 AC105245.1-201ENST00000581934 244 ntBASIC2.73□□□□□ -1.97
PTCHD3Q3KNS1 MIR3616-201ENST00000584070 92 ntBASIC2.73□□□□□ -1.97
PTCHD3Q3KNS1 ELOCP29-201ENST00000588193 334 ntBASIC2.73□□□□□ -1.97
PTCHD3Q3KNS1 AC006023.1-201ENST00000603944 259 ntBASIC2.73□□□□□ -1.97
PTCHD3Q3KNS1 RAC1P9-201ENST00000604990 392 ntBASIC2.73□□□□□ -1.97
PTCHD3Q3KNS1 Y_RNA.772-201ENST00000606692 102 ntBASIC2.73□□□□□ -1.97
PTCHD3Q3KNS1 AC010999.1-201ENST00000611856 324 ntBASIC2.73□□□□□ -1.97
PTCHD3Q3KNS1 AC080128.1-201ENST00000474389 1917 ntBASIC2.73□□□□□ -1.97
PTCHD3Q3KNS1 AC138915.1-201ENST00000565427 1685 ntBASIC2.73□□□□□ -1.97
PTCHD3Q3KNS1 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
PTCHD3Q3KNS1 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
PTCHD3Q3KNS1 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
PTCHD3Q3KNS1 Y_RNA.214-201ENST00000364201 112 ntBASIC2.72□□□□□ -1.97
PTCHD3Q3KNS1 SNORD32B-201ENST00000364460 84 ntBASIC2.72□□□□□ -1.97
PTCHD3Q3KNS1 Y_RNA.439-201ENST00000384119 94 ntBASIC2.72□□□□□ -1.97
PTCHD3Q3KNS1 RNU6-196P-201ENST00000384315 107 ntBASIC2.72□□□□□ -1.97
PTCHD3Q3KNS1 MIR568-201ENST00000385036 95 ntBASIC2.72□□□□□ -1.97
PTCHD3Q3KNS1 MIR1302-3-201ENST00000408128 138 ntBASIC2.72□□□□□ -1.97
PTCHD3Q3KNS1 CBX3P6-201ENST00000430257 527 ntBASIC2.72□□□□□ -1.97
PTCHD3Q3KNS1 AC087499.2-201ENST00000432861 149 ntBASIC2.72□□□□□ -1.97
PTCHD3Q3KNS1 AL731563.1-201ENST00000442202 214 ntBASIC2.72□□□□□ -1.97
PTCHD3Q3KNS1 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.72□□□□□ -1.97
PTCHD3Q3KNS1 Z96811.1-201ENST00000445880 108 ntBASIC2.72□□□□□ -1.97
PTCHD3Q3KNS1 AC007395.1-201ENST00000451333 677 ntBASIC2.72□□□□□ -1.97
PTCHD3Q3KNS1 AC140059.1-201ENST00000489238 361 ntBASIC2.72□□□□□ -1.97
PTCHD3Q3KNS1 RNU6-897P-201ENST00000517135 105 ntBASIC2.72□□□□□ -1.97
PTCHD3Q3KNS1 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.72□□□□□ -1.97
PTCHD3Q3KNS1 COX6CP5-201ENST00000527162 228 ntBASIC2.72□□□□□ -1.97
PTCHD3Q3KNS1 AC090517.1-201ENST00000569307 266 ntBASIC2.72□□□□□ -1.97
PTCHD3Q3KNS1 MIR3199-1-201ENST00000582434 88 ntBASIC2.72□□□□□ -1.97
PTCHD3Q3KNS1 AL713866.2-201ENST00000603579 219 ntBASIC2.72□□□□□ -1.97
PTCHD3Q3KNS1 AP000942.4-201ENST00000604811 241 ntBASIC2.72□□□□□ -1.97
PTCHD3Q3KNS1 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.72□□□□□ -1.97
PTCHD3Q3KNS1 TCL6_2.1-201ENST00000615162 119 ntBASIC2.72□□□□□ -1.97
PTCHD3Q3KNS1 AC240442.1-201ENST00000616055 283 ntBASIC2.72□□□□□ -1.97
PTCHD3Q3KNS1 AL161431.1-201ENST00000618966 4205 ntBASIC2.72□□□□□ -1.97
PTCHD3Q3KNS1 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.71□□□□□ -1.97
PTCHD3Q3KNS1 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.71□□□□□ -1.98
PTCHD3Q3KNS1 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 166.7 ms