Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.27□□□□□ -2.37
RFX7Q2KHR2 RPL23AP95-201ENST00000426806 265 ntBASIC0.27□□□□□ -2.37
RFX7Q2KHR2 AC137499.1-201ENST00000427602 88 ntBASIC0.27□□□□□ -2.37
RFX7Q2KHR2 MTND1P32-201ENST00000433043 938 ntBASIC0.27□□□□□ -2.37
RFX7Q2KHR2 AC002486.1-201ENST00000435098 391 ntBASIC0.27□□□□□ -2.37
RFX7Q2KHR2 FABP5P4-201ENST00000437203 171 ntBASIC0.27□□□□□ -2.37
RFX7Q2KHR2 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.27□□□□□ -2.37
RFX7Q2KHR2 C1DP4-201ENST00000455429 424 ntBASIC0.27□□□□□ -2.37
RFX7Q2KHR2 RNU6-1003P-201ENST00000517099 105 ntBASIC0.27□□□□□ -2.37
RFX7Q2KHR2 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.27□□□□□ -2.37
RFX7Q2KHR2 MIR4307-201ENST00000582802 84 ntBASIC0.27□□□□□ -2.37
RFX7Q2KHR2 MIR4753-201ENST00000585119 83 ntBASIC0.27□□□□□ -2.37
RFX7Q2KHR2 AL138726.1-201ENST00000614873 333 ntBASIC0.27□□□□□ -2.37
RFX7Q2KHR2 AL121895.2-201ENST00000619558 447 ntBASIC0.27□□□□□ -2.37
RFX7Q2KHR2 AC106754.2-201ENST00000623006 233 ntBASIC0.27□□□□□ -2.37
RFX7Q2KHR2 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.27□□□□□ -2.37
RFX7Q2KHR2 ZNF736P9Y-201ENST00000439586 1345 ntBASIC0.27□□□□□ -2.37
RFX7Q2KHR2 AC090625.1-201ENST00000357130 210 ntBASIC0.26□□□□□ -2.37
RFX7Q2KHR2 RNU6-692P-201ENST00000384496 107 ntBASIC0.26□□□□□ -2.37
RFX7Q2KHR2 RNU6-1031P-201ENST00000384773 107 ntBASIC0.26□□□□□ -2.37
RFX7Q2KHR2 RNA5SP109-201ENST00000391010 116 ntBASIC0.26□□□□□ -2.37
RFX7Q2KHR2 AL031779.1-201ENST00000415663 330 ntBASIC0.26□□□□□ -2.37
RFX7Q2KHR2 AC010154.1-201ENST00000425857 269 ntBASIC0.26□□□□□ -2.37
RFX7Q2KHR2 RPEP5-201ENST00000441137 268 ntBASIC0.26□□□□□ -2.37
RFX7Q2KHR2 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC0.26□□□□□ -2.37
RFX7Q2KHR2 MTND1P12-201ENST00000455231 147 ntBASIC0.26□□□□□ -2.37
RFX7Q2KHR2 RPL39P39-201ENST00000455840 151 ntBASIC0.26□□□□□ -2.37
RFX7Q2KHR2 TRBVB-201ENST00000477100 408 ntBASIC0.26□□□□□ -2.37
RFX7Q2KHR2 AC098869.1-201ENST00000481627 292 ntBASIC0.26□□□□□ -2.37
RFX7Q2KHR2 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.26□□□□□ -2.37
RFX7Q2KHR2 MTND3P25-201ENST00000509243 135 ntBASIC0.26□□□□□ -2.37
RFX7Q2KHR2 AL356157.2-201ENST00000605122 111 ntBASIC0.26□□□□□ -2.37
RFX7Q2KHR2 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.26□□□□□ -2.37
RFX7Q2KHR2 snoU2-30.2-201ENST00000362805 70 ntBASIC0.25□□□□□ -2.37
RFX7Q2KHR2 RNU6-552P-201ENST00000362869 119 ntBASIC0.25□□□□□ -2.37
RFX7Q2KHR2 U3.4-201ENST00000363352 213 ntBASIC0.25□□□□□ -2.37
RFX7Q2KHR2 RNU6-969P-201ENST00000383900 105 ntBASIC0.25□□□□□ -2.37
RFX7Q2KHR2 MIR1253-201ENST00000408273 105 ntBASIC0.25□□□□□ -2.37
RFX7Q2KHR2 RPL22P18-201ENST00000417197 377 ntBASIC0.25□□□□□ -2.37
RFX7Q2KHR2 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
RFX7Q2KHR2 AL356583.2-201ENST00000426536 280 ntBASIC0.25□□□□□ -2.37
RFX7Q2KHR2 AC092423.1-201ENST00000430165 186 ntBASIC0.25□□□□□ -2.37
RFX7Q2KHR2 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.25□□□□□ -2.37
RFX7Q2KHR2 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.25□□□□□ -2.37
RFX7Q2KHR2 AC007547.1-201ENST00000462177 490 ntBASIC0.25□□□□□ -2.37
RFX7Q2KHR2 AC016632.1-201ENST00000503994 196 ntBASIC0.25□□□□□ -2.37
RFX7Q2KHR2 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.25□□□□□ -2.37
RFX7Q2KHR2 AC117522.1-201ENST00000509821 380 ntBASIC0.25□□□□□ -2.37
RFX7Q2KHR2 RNU6-948P-201ENST00000516374 107 ntBASIC0.25□□□□□ -2.37
RFX7Q2KHR2 AC109479.2-201ENST00000517842 174 ntBASIC0.25□□□□□ -2.37
RFX7Q2KHR2 AC024995.1-201ENST00000523014 93 ntBASIC0.25□□□□□ -2.37
RFX7Q2KHR2 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.25□□□□□ -2.37
RFX7Q2KHR2 TPRKBP2-201ENST00000565969 475 ntBASIC0.25□□□□□ -2.37
RFX7Q2KHR2 MIR4742-201ENST00000581069 85 ntBASIC0.25□□□□□ -2.37
RFX7Q2KHR2 MIR5093-201ENST00000583199 100 ntBASIC0.25□□□□□ -2.37
RFX7Q2KHR2 AC112187.2-201ENST00000604345 283 ntBASIC0.25□□□□□ -2.37
RFX7Q2KHR2 AL592221.1-201ENST00000605266 382 ntBASIC0.25□□□□□ -2.37
RFX7Q2KHR2 AP001596.2-201ENST00000608410 312 ntBASIC0.25□□□□□ -2.37
RFX7Q2KHR2 RNU6-433P-201ENST00000363216 104 ntBASIC0.24□□□□□ -2.37
RFX7Q2KHR2 RNU6-25P-201ENST00000383873 107 ntBASIC0.24□□□□□ -2.37
RFX7Q2KHR2 RNU6-945P-201ENST00000383947 107 ntBASIC0.24□□□□□ -2.37
RFX7Q2KHR2 RNU6-48P-201ENST00000384161 107 ntBASIC0.24□□□□□ -2.37
RFX7Q2KHR2 Y_RNA.476-201ENST00000384347 108 ntBASIC0.24□□□□□ -2.37
RFX7Q2KHR2 RNU6-15P-201ENST00000384534 107 ntBASIC0.24□□□□□ -2.37
RFX7Q2KHR2 RNU6-29P-201ENST00000384637 107 ntBASIC0.24□□□□□ -2.37
RFX7Q2KHR2 MIR208B-201ENST00000401172 77 ntBASIC0.24□□□□□ -2.37
RFX7Q2KHR2 EEF1A1P40-201ENST00000412883 573 ntBASIC0.24□□□□□ -2.37
RFX7Q2KHR2 HMGN2P34-201ENST00000437647 269 ntBASIC0.24□□□□□ -2.37
RFX7Q2KHR2 EEF1A1P39-201ENST00000440791 250 ntBASIC0.24□□□□□ -2.37
RFX7Q2KHR2 AL606662.1-201ENST00000445763 553 ntBASIC0.24□□□□□ -2.37
RFX7Q2KHR2 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.24□□□□□ -2.37
RFX7Q2KHR2 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC0.24□□□□□ -2.37
RFX7Q2KHR2 RNU7-90P-201ENST00000459216 62 ntBASIC0.24□□□□□ -2.37
RFX7Q2KHR2 SRRM1P2-201ENST00000464531 1192 ntBASIC0.24□□□□□ -2.37
RFX7Q2KHR2 RBBP4P6-201ENST00000508098 202 ntBASIC0.24□□□□□ -2.37
RFX7Q2KHR2 AC116347.2-201ENST00000514912 523 ntBASIC0.24□□□□□ -2.37
RFX7Q2KHR2 RNU6-276P-201ENST00000516114 96 ntBASIC0.24□□□□□ -2.37
RFX7Q2KHR2 AC022616.6-201ENST00000520479 119 ntBASIC0.24□□□□□ -2.37
RFX7Q2KHR2 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC0.24□□□□□ -2.37
RFX7Q2KHR2 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC0.24□□□□□ -2.37
RFX7Q2KHR2 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.24□□□□□ -2.37
RFX7Q2KHR2 MIR5695-201ENST00000579717 85 ntBASIC0.24□□□□□ -2.37
RFX7Q2KHR2 AC146944.4-201ENST00000602697 718 ntBASIC0.24□□□□□ -2.37
RFX7Q2KHR2 AC078795.3-201ENST00000602913 472 ntBASIC0.24□□□□□ -2.37
RFX7Q2KHR2 AL360219.1-201ENST00000610230 366 ntBASIC0.24□□□□□ -2.37
RFX7Q2KHR2 AC116165.2-201ENST00000616705 206 ntBASIC0.24□□□□□ -2.37
RFX7Q2KHR2 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC0.24□□□□□ -2.37
RFX7Q2KHR2 CASC19-280ENST00000642102 1351 ntBASIC0.23□□□□□ -2.37
RFX7Q2KHR2 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
RFX7Q2KHR2 RNU4-76P-201ENST00000364509 141 ntBASIC0.23□□□□□ -2.37
RFX7Q2KHR2 Y_RNA.363-201ENST00000365529 113 ntBASIC0.23□□□□□ -2.37
RFX7Q2KHR2 RNU6-641P-201ENST00000384006 107 ntBASIC0.23□□□□□ -2.37
RFX7Q2KHR2 RNU6-505P-201ENST00000384427 107 ntBASIC0.23□□□□□ -2.37
RFX7Q2KHR2 MIR329-2-201ENST00000385029 84 ntBASIC0.23□□□□□ -2.37
RFX7Q2KHR2 MIR1283-1-201ENST00000408494 87 ntBASIC0.23□□□□□ -2.37
RFX7Q2KHR2 RNU2-39P-201ENST00000410604 198 ntBASIC0.23□□□□□ -2.37
RFX7Q2KHR2 RNU6-607P-201ENST00000411283 108 ntBASIC0.23□□□□□ -2.37
RFX7Q2KHR2 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.23□□□□□ -2.37
RFX7Q2KHR2 AC090960.1-201ENST00000421072 306 ntBASIC0.23□□□□□ -2.37
RFX7Q2KHR2 AC119618.1-201ENST00000434191 222 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms