Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC092436.3-201ENST00000511788 257 ntBASIC-0.18□□□□□ -2.44
HIST1H1AQ02539 RNA5SP227-201ENST00000516184 113 ntBASIC-0.18□□□□□ -2.44
HIST1H1AQ02539 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC-0.18□□□□□ -2.44
HIST1H1AQ02539 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.18□□□□□ -2.44
HIST1H1AQ02539 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.18□□□□□ -2.44
HIST1H1AQ02539 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC-0.18□□□□□ -2.44
HIST1H1AQ02539 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC-0.18□□□□□ -2.44
HIST1H1AQ02539 AL359697.1-201ENST00000624879 587 ntBASIC-0.18□□□□□ -2.44
HIST1H1AQ02539 Y_RNA.118-201ENST00000363300 101 ntBASIC-0.19□□□□□ -2.44
HIST1H1AQ02539 RNU6-609P-201ENST00000365459 107 ntBASIC-0.19□□□□□ -2.44
HIST1H1AQ02539 RNU6-417P-201ENST00000384712 107 ntBASIC-0.19□□□□□ -2.44
HIST1H1AQ02539 MIR578-201ENST00000384828 96 ntBASIC-0.19□□□□□ -2.44
HIST1H1AQ02539 SNORD105-201ENST00000386910 85 ntBASIC-0.19□□□□□ -2.44
HIST1H1AQ02539 RNA5SP467-201ENST00000391274 118 ntBASIC-0.19□□□□□ -2.44
HIST1H1AQ02539 MIR1283-1-201ENST00000408494 87 ntBASIC-0.19□□□□□ -2.44
HIST1H1AQ02539 MTCO2P34-201ENST00000421994 607 ntBASIC-0.19□□□□□ -2.44
HIST1H1AQ02539 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC-0.19□□□□□ -2.44
HIST1H1AQ02539 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC-0.19□□□□□ -2.44
HIST1H1AQ02539 TPT1P7-201ENST00000458300 517 ntBASIC-0.19□□□□□ -2.44
HIST1H1AQ02539 RBBP4P6-201ENST00000508098 202 ntBASIC-0.19□□□□□ -2.44
HIST1H1AQ02539 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC-0.19□□□□□ -2.44
HIST1H1AQ02539 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC-0.19□□□□□ -2.44
HIST1H1AQ02539 RNU6-948P-201ENST00000516374 107 ntBASIC-0.19□□□□□ -2.44
HIST1H1AQ02539 AP002453.2-201ENST00000533503 320 ntBASIC-0.19□□□□□ -2.44
HIST1H1AQ02539 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC-0.19□□□□□ -2.44
HIST1H1AQ02539 AC022523.2-201ENST00000561045 150 ntBASIC-0.19□□□□□ -2.44
HIST1H1AQ02539 MIR1273G-201ENST00000577677 100 ntBASIC-0.19□□□□□ -2.44
HIST1H1AQ02539 DEFB131E-202ENST00000602581 683 ntBASIC-0.19□□□□□ -2.44
HIST1H1AQ02539 AC146944.4-201ENST00000602697 718 ntBASIC-0.19□□□□□ -2.44
HIST1H1AQ02539 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC-0.19□□□□□ -2.44
HIST1H1AQ02539 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC-0.19□□□□□ -2.44
HIST1H1AQ02539 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC-0.2□□□□□ -2.44
HIST1H1AQ02539 AC010975.2-201ENST00000427781 588 ntBASIC-0.2□□□□□ -2.44
HIST1H1AQ02539 HSFY7P-201ENST00000432672 318 ntBASIC-0.2□□□□□ -2.44
HIST1H1AQ02539 HSFY8P-201ENST00000437934 318 ntBASIC-0.2□□□□□ -2.44
HIST1H1AQ02539 AC025465.4-201ENST00000513422 638 ntBASIC-0.2□□□□□ -2.44
HIST1H1AQ02539 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.2□□□□□ -2.44
HIST1H1AQ02539 AC090517.1-201ENST00000569307 266 ntBASIC-0.2□□□□□ -2.44
HIST1H1AQ02539 MIR4753-201ENST00000585119 83 ntBASIC-0.2□□□□□ -2.44
HIST1H1AQ02539 AL162730.1-201ENST00000605734 292 ntBASIC-0.2□□□□□ -2.44
HIST1H1AQ02539 AL096861.1-201ENST00000610899 123 ntBASIC-0.2□□□□□ -2.44
HIST1H1AQ02539 MIR8087-201ENST00000612745 78 ntBASIC-0.2□□□□□ -2.44
HIST1H1AQ02539 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC-0.2□□□□□ -2.44
HIST1H1AQ02539 SEPT14P17-201ENST00000617978 177 ntBASIC-0.2□□□□□ -2.44
HIST1H1AQ02539 AP000484.1-201ENST00000620067 1252 ntBASIC-0.2□□□□□ -2.44
HIST1H1AQ02539 AL078595.3-201ENST00000623815 1166 ntBASIC-0.2□□□□□ -2.44
HIST1H1AQ02539 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC-0.2□□□□□ -2.44
HIST1H1AQ02539 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC-0.2□□□□□ -2.44
HIST1H1AQ02539 AL390237.1-201ENST00000404226 1415 ntBASIC-0.21□□□□□ -2.44
HIST1H1AQ02539 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC-0.21□□□□□ -2.44
HIST1H1AQ02539 MIR103A2-201ENST00000362154 78 ntBASIC-0.21□□□□□ -2.44
HIST1H1AQ02539 RNA5SP214-201ENST00000363378 118 ntBASIC-0.21□□□□□ -2.44
HIST1H1AQ02539 Y_RNA.287-201ENST00000364853 94 ntBASIC-0.21□□□□□ -2.44
HIST1H1AQ02539 RNY3P13-201ENST00000365542 102 ntBASIC-0.21□□□□□ -2.44
HIST1H1AQ02539 RNU6-378P-201ENST00000384324 107 ntBASIC-0.21□□□□□ -2.44
HIST1H1AQ02539 RNU6-440P-201ENST00000390882 105 ntBASIC-0.21□□□□□ -2.44
HIST1H1AQ02539 MRPL42P3-201ENST00000401492 326 ntBASIC-0.21□□□□□ -2.44
HIST1H1AQ02539 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC-0.21□□□□□ -2.44
HIST1H1AQ02539 AC093019.1-201ENST00000443135 252 ntBASIC-0.21□□□□□ -2.44
HIST1H1AQ02539 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC-0.21□□□□□ -2.44
HIST1H1AQ02539 SNRPGP7-201ENST00000469016 106 ntBASIC-0.21□□□□□ -2.44
HIST1H1AQ02539 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC-0.21□□□□□ -2.44
HIST1H1AQ02539 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC-0.21□□□□□ -2.44
HIST1H1AQ02539 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC-0.21□□□□□ -2.44
HIST1H1AQ02539 RNU6-567P-201ENST00000516746 107 ntBASIC-0.21□□□□□ -2.44
HIST1H1AQ02539 AC069113.3-201ENST00000521019 150 ntBASIC-0.21□□□□□ -2.44
HIST1H1AQ02539 LRRC6P1-201ENST00000532188 885 ntBASIC-0.21□□□□□ -2.44
HIST1H1AQ02539 NDUFAF4P1-201ENST00000559425 519 ntBASIC-0.21□□□□□ -2.44
HIST1H1AQ02539 AC010620.1-201ENST00000601088 1102 ntBASIC-0.21□□□□□ -2.44
HIST1H1AQ02539 AC009994.1-201ENST00000606889 253 ntBASIC-0.21□□□□□ -2.44
HIST1H1AQ02539 RNU6-621P-201ENST00000364752 109 ntBASIC-0.22□□□□□ -2.44
HIST1H1AQ02539 RNU6-716P-201ENST00000365621 103 ntBASIC-0.22□□□□□ -2.44
HIST1H1AQ02539 RNU6-815P-201ENST00000384080 113 ntBASIC-0.22□□□□□ -2.44
HIST1H1AQ02539 RNU6-700P-201ENST00000391043 107 ntBASIC-0.22□□□□□ -2.44
HIST1H1AQ02539 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC-0.22□□□□□ -2.44
HIST1H1AQ02539 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC-0.22□□□□□ -2.44
HIST1H1AQ02539 AC245047.3-201ENST00000429428 127 ntBASIC-0.22□□□□□ -2.44
HIST1H1AQ02539 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-0.22□□□□□ -2.44
HIST1H1AQ02539 RNU2-10P-201ENST00000516375 211 ntBASIC-0.22□□□□□ -2.44
HIST1H1AQ02539 RNU1-142P-201ENST00000516682 145 ntBASIC-0.22□□□□□ -2.44
HIST1H1AQ02539 OR8K2P-201ENST00000524645 927 ntBASIC-0.22□□□□□ -2.44
HIST1H1AQ02539 AL391840.1-201ENST00000571144 367 ntBASIC-0.22□□□□□ -2.44
HIST1H1AQ02539 MIR5697-201ENST00000578045 78 ntBASIC-0.22□□□□□ -2.44
HIST1H1AQ02539 MIR4290-201ENST00000583807 95 ntBASIC-0.22□□□□□ -2.44
HIST1H1AQ02539 AC234772.3-201ENST00000602277 528 ntBASIC-0.22□□□□□ -2.44
HIST1H1AQ02539 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC-0.22□□□□□ -2.44
HIST1H1AQ02539 AC005520.5-201ENST00000613926 164 ntBASIC-0.22□□□□□ -2.44
HIST1H1AQ02539 RNU6-562P-201ENST00000362731 107 ntBASIC-0.23□□□□□ -2.45
HIST1H1AQ02539 RNY4P16-201ENST00000364768 94 ntBASIC-0.23□□□□□ -2.45
HIST1H1AQ02539 MIR1197-201ENST00000408818 88 ntBASIC-0.23□□□□□ -2.45
HIST1H1AQ02539 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC-0.23□□□□□ -2.45
HIST1H1AQ02539 AC073261.1-201ENST00000429409 121 ntBASIC-0.23□□□□□ -2.45
HIST1H1AQ02539 STAG3L5P-204ENST00000443759 179 ntBASIC-0.23□□□□□ -2.45
HIST1H1AQ02539 AL360271.2-201ENST00000447710 161 ntBASIC-0.23□□□□□ -2.45
HIST1H1AQ02539 AHI1-208ENST00000488690 712 ntTSL 5 BASIC-0.23□□□□□ -2.45
HIST1H1AQ02539 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC-0.23□□□□□ -2.45
HIST1H1AQ02539 AC004584.2-201ENST00000570407 410 ntBASIC-0.23□□□□□ -2.45
HIST1H1AQ02539 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC-0.23□□□□□ -2.45
HIST1H1AQ02539 AC144521.1-201ENST00000607148 956 ntBASIC-0.23□□□□□ -2.45
HIST1H1AQ02539 RNU6-94P-201ENST00000607728 107 ntBASIC-0.23□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms