Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 AC090582.1-201ENST00000636321 199 ntBASIC1.38□□□□□ -2.19
CBX1P83916 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
CBX1P83916 MIR302D-201ENST00000362275 68 ntBASIC1.37□□□□□ -2.19
CBX1P83916 Y_RNA.123-201ENST00000363338 102 ntBASIC1.37□□□□□ -2.19
CBX1P83916 Y_RNA.359-201ENST00000365498 102 ntBASIC1.37□□□□□ -2.19
CBX1P83916 CST2P1-201ENST00000425770 87 ntBASIC1.37□□□□□ -2.19
CBX1P83916 AL359672.1-201ENST00000442302 409 ntBASIC1.37□□□□□ -2.19
CBX1P83916 RNU6-261P-201ENST00000459506 102 ntBASIC1.37□□□□□ -2.19
CBX1P83916 Y_RNA.654-201ENST00000497848 106 ntBASIC1.37□□□□□ -2.19
CBX1P83916 SNORA19.2-201ENST00000516013 114 ntBASIC1.37□□□□□ -2.19
CBX1P83916 RNU1-41P-201ENST00000516161 162 ntBASIC1.37□□□□□ -2.19
CBX1P83916 RNU1-48P-201ENST00000516400 162 ntBASIC1.37□□□□□ -2.19
CBX1P83916 RNA5SP384-201ENST00000516615 116 ntBASIC1.37□□□□□ -2.19
CBX1P83916 RNU6-902P-201ENST00000517212 91 ntBASIC1.37□□□□□ -2.19
CBX1P83916 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.37□□□□□ -2.19
CBX1P83916 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.37□□□□□ -2.19
CBX1P83916 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.37□□□□□ -2.19
CBX1P83916 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.37□□□□□ -2.19
CBX1P83916 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.37□□□□□ -2.19
CBX1P83916 MIR4255-201ENST00000579351 72 ntBASIC1.37□□□□□ -2.19
CBX1P83916 AL121757.2-201ENST00000611223 313 ntBASIC1.37□□□□□ -2.19
CBX1P83916 AC126177.8-201ENST00000618339 1015 ntBASIC1.37□□□□□ -2.19
CBX1P83916 AC009509.4-201ENST00000619202 509 ntBASIC1.37□□□□□ -2.19
CBX1P83916 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.37□□□□□ -2.19
CBX1P83916 BX322639.1-202ENST00000423987 2213 ntBASIC1.37□□□□□ -2.19
CBX1P83916 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.37□□□□□ -2.19
CBX1P83916 SNORD1A-201ENST00000364968 72 ntBASIC1.36□□□□□ -2.19
CBX1P83916 RNU6-968P-201ENST00000384076 107 ntBASIC1.36□□□□□ -2.19
CBX1P83916 RNY3P9-201ENST00000384727 106 ntBASIC1.36□□□□□ -2.19
CBX1P83916 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
CBX1P83916 AL627390.1-201ENST00000396055 340 ntBASIC1.36□□□□□ -2.19
CBX1P83916 MIR1285-1-201ENST00000408593 84 ntBASIC1.36□□□□□ -2.19
CBX1P83916 TIMM9P3-201ENST00000428659 274 ntBASIC1.36□□□□□ -2.19
CBX1P83916 MTND1P26-201ENST00000440488 538 ntBASIC1.36□□□□□ -2.19
CBX1P83916 AC114982.1-201ENST00000469402 321 ntBASIC1.36□□□□□ -2.19
CBX1P83916 AC083798.1-201ENST00000472671 131 ntBASIC1.36□□□□□ -2.19
CBX1P83916 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.36□□□□□ -2.19
CBX1P83916 AC010486.3-201ENST00000511602 785 ntBASIC1.36□□□□□ -2.19
CBX1P83916 RNU1-92P-201ENST00000517017 135 ntBASIC1.36□□□□□ -2.19
CBX1P83916 AC104383.1-201ENST00000530297 370 ntBASIC1.36□□□□□ -2.19
CBX1P83916 AL157687.1-201ENST00000554853 619 ntBASIC1.36□□□□□ -2.19
CBX1P83916 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.36□□□□□ -2.19
CBX1P83916 AP000907.4-201ENST00000604143 237 ntBASIC1.36□□□□□ -2.19
CBX1P83916 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC1.36□□□□□ -2.19
CBX1P83916 AC095038.3-201ENST00000634439 195 ntBASIC1.36□□□□□ -2.19
CBX1P83916 RNU6-1322P-201ENST00000364309 107 ntBASIC1.35□□□□□ -2.19
CBX1P83916 RNU4-20P-201ENST00000365601 151 ntBASIC1.35□□□□□ -2.19
CBX1P83916 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.35□□□□□ -2.19
CBX1P83916 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.35□□□□□ -2.19
CBX1P83916 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.35□□□□□ -2.19
CBX1P83916 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.35□□□□□ -2.19
CBX1P83916 AC079140.2-201ENST00000506193 142 ntBASIC1.35□□□□□ -2.19
CBX1P83916 AC091885.1-201ENST00000506658 268 ntBASIC1.35□□□□□ -2.19
CBX1P83916 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.35□□□□□ -2.19
CBX1P83916 RNU6-948P-201ENST00000516374 107 ntBASIC1.35□□□□□ -2.19
CBX1P83916 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.35□□□□□ -2.19
CBX1P83916 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.35□□□□□ -2.19
CBX1P83916 MRPS36P4-201ENST00000534436 298 ntBASIC1.35□□□□□ -2.19
CBX1P83916 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC1.35□□□□□ -2.19
CBX1P83916 FGF7P1-201ENST00000582820 288 ntBASIC1.35□□□□□ -2.19
CBX1P83916 AC092807.2-201ENST00000609367 243 ntBASIC1.35□□□□□ -2.19
CBX1P83916 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.35□□□□□ -2.19
CBX1P83916 AL121890.5-201ENST00000620848 304 ntBASIC1.35□□□□□ -2.19
CBX1P83916 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.34□□□□□ -2.19
CBX1P83916 U8.1-201ENST00000362843 134 ntBASIC1.34□□□□□ -2.19
CBX1P83916 RNA5SP190-201ENST00000365222 118 ntBASIC1.34□□□□□ -2.19
CBX1P83916 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
CBX1P83916 SNORA69-201ENST00000383895 132 ntBASIC1.34□□□□□ -2.19
CBX1P83916 RNU6-214P-201ENST00000384130 107 ntBASIC1.34□□□□□ -2.19
CBX1P83916 RNU6-1235P-201ENST00000384559 107 ntBASIC1.34□□□□□ -2.19
CBX1P83916 U8.13-201ENST00000390842 128 ntBASIC1.34□□□□□ -2.19
CBX1P83916 SNORA67.6-201ENST00000391093 99 ntBASIC1.34□□□□□ -2.19
CBX1P83916 MRPS10P2-201ENST00000431226 381 ntBASIC1.34□□□□□ -2.19
CBX1P83916 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.34□□□□□ -2.19
CBX1P83916 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.34□□□□□ -2.19
CBX1P83916 AC009237.7-201ENST00000447357 229 ntBASIC1.34□□□□□ -2.19
CBX1P83916 NFU1P2-201ENST00000448700 469 ntBASIC1.34□□□□□ -2.19
CBX1P83916 AC016717.1-201ENST00000448918 286 ntBASIC1.34□□□□□ -2.19
CBX1P83916 RNU6-498P-201ENST00000459468 107 ntBASIC1.34□□□□□ -2.19
CBX1P83916 SRRM1P2-201ENST00000464531 1192 ntBASIC1.34□□□□□ -2.19
CBX1P83916 AC099513.1-201ENST00000490423 301 ntBASIC1.34□□□□□ -2.19
CBX1P83916 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
CBX1P83916 RRN3P3-201ENST00000549207 578 ntBASIC1.34□□□□□ -2.19
CBX1P83916 RMST_3.1-201ENST00000611651 109 ntBASIC1.34□□□□□ -2.19
CBX1P83916 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.34□□□□□ -2.19
CBX1P83916 MIR338-201ENST00000636369 67 ntBASIC1.34□□□□□ -2.19
CBX1P83916 SNORD33-201ENST00000362761 85 ntBASIC1.33□□□□□ -2.2
CBX1P83916 Y_RNA.409-201ENST00000383990 98 ntBASIC1.33□□□□□ -2.2
CBX1P83916 RNU6-203P-201ENST00000384038 104 ntBASIC1.33□□□□□ -2.2
CBX1P83916 RNU6-975P-201ENST00000384296 105 ntBASIC1.33□□□□□ -2.2
CBX1P83916 Y_RNA.481-201ENST00000384373 102 ntBASIC1.33□□□□□ -2.2
CBX1P83916 MIR517C-201ENST00000385103 95 ntBASIC1.33□□□□□ -2.2
CBX1P83916 SNORA26.9-201ENST00000391322 122 ntBASIC1.33□□□□□ -2.2
CBX1P83916 RNU6-325P-201ENST00000411132 105 ntBASIC1.33□□□□□ -2.2
CBX1P83916 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.33□□□□□ -2.2
CBX1P83916 AL121890.1-201ENST00000435457 205 ntBASIC1.33□□□□□ -2.2
CBX1P83916 MTCO2P16-201ENST00000436962 677 ntBASIC1.33□□□□□ -2.2
CBX1P83916 AC027119.1-201ENST00000440877 241 ntBASIC1.33□□□□□ -2.2
CBX1P83916 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.33□□□□□ -2.2
CBX1P83916 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms