Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AP001486.1-201ENST00000463339 476 ntBASIC2.02□□□□□ -2.09
CX3CL1P78423 RPS23P5-201ENST00000495419 428 ntBASIC2.02□□□□□ -2.09
CX3CL1P78423 AC093259.1-201ENST00000509755 300 ntBASIC2.02□□□□□ -2.09
CX3CL1P78423 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.02□□□□□ -2.09
CX3CL1P78423 AC093303.1-201ENST00000514549 295 ntBASIC2.02□□□□□ -2.09
CX3CL1P78423 RNU2-44P-201ENST00000516795 194 ntBASIC2.02□□□□□ -2.09
CX3CL1P78423 RNU6-1198P-201ENST00000516904 67 ntBASIC2.02□□□□□ -2.09
CX3CL1P78423 RNU6-264P-201ENST00000517134 104 ntBASIC2.02□□□□□ -2.09
CX3CL1P78423 RNU1-104P-201ENST00000517280 175 ntBASIC2.02□□□□□ -2.09
CX3CL1P78423 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.02□□□□□ -2.09
CX3CL1P78423 MIR5006-201ENST00000583027 110 ntBASIC2.02□□□□□ -2.09
CX3CL1P78423 SNRPGP20-201ENST00000604477 205 ntBASIC2.02□□□□□ -2.09
CX3CL1P78423 MIR1244-1-201ENST00000612829 85 ntBASIC2.02□□□□□ -2.09
CX3CL1P78423 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.02□□□□□ -2.09
CX3CL1P78423 MIR1244-3-201ENST00000635744 85 ntBASIC2.02□□□□□ -2.09
CX3CL1P78423 MIR1244-2-201ENST00000636449 85 ntBASIC2.02□□□□□ -2.09
CX3CL1P78423 MIR1244-4-202ENST00000636813 85 ntBASIC2.02□□□□□ -2.09
CX3CL1P78423 MTND5P10-201ENST00000603719 1809 ntBASIC2.02□□□□□ -2.09
CX3CL1P78423 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CX3CL1P78423 RNU6-797P-201ENST00000363101 109 ntBASIC2.01□□□□□ -2.09
CX3CL1P78423 Y_RNA.187-201ENST00000363918 113 ntBASIC2.01□□□□□ -2.09
CX3CL1P78423 RNU6-159P-201ENST00000391080 106 ntBASIC2.01□□□□□ -2.09
CX3CL1P78423 RNU1-139P-201ENST00000391307 165 ntBASIC2.01□□□□□ -2.09
CX3CL1P78423 USP9YP16-201ENST00000430287 407 ntBASIC2.01□□□□□ -2.09
CX3CL1P78423 IFNA11P-201ENST00000446352 526 ntBASIC2.01□□□□□ -2.09
CX3CL1P78423 AC009237.7-201ENST00000447357 229 ntBASIC2.01□□□□□ -2.09
CX3CL1P78423 AC108938.1-201ENST00000451204 136 ntBASIC2.01□□□□□ -2.09
CX3CL1P78423 AL109933.2-201ENST00000452651 260 ntBASIC2.01□□□□□ -2.09
CX3CL1P78423 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.01□□□□□ -2.09
CX3CL1P78423 USP9YP23-201ENST00000455085 407 ntBASIC2.01□□□□□ -2.09
CX3CL1P78423 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.01□□□□□ -2.09
CX3CL1P78423 RNA5SP137-201ENST00000516833 135 ntBASIC2.01□□□□□ -2.09
CX3CL1P78423 ANP32BP3-201ENST00000559213 706 ntBASIC2.01□□□□□ -2.09
CX3CL1P78423 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.01□□□□□ -2.09
CX3CL1P78423 AC026271.5-201ENST00000577873 130 ntBASIC2.01□□□□□ -2.09
CX3CL1P78423 AL031274.2-201ENST00000599419 203 ntBASIC2.01□□□□□ -2.09
CX3CL1P78423 AL133255.1-201ENST00000606374 441 ntBASIC2.01□□□□□ -2.09
CX3CL1P78423 AC245884.12-201ENST00000615364 59 ntBASIC2.01□□□□□ -2.09
CX3CL1P78423 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2□□□□□ -2.09
CX3CL1P78423 MTND5P16-201ENST00000460269 1703 ntBASIC2□□□□□ -2.09
CX3CL1P78423 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2□□□□□ -2.09
CX3CL1P78423 Y_RNA.364-201ENST00000365532 101 ntBASIC2□□□□□ -2.09
CX3CL1P78423 RNU6-245P-201ENST00000384020 107 ntBASIC2□□□□□ -2.09
CX3CL1P78423 SNORA80E-201ENST00000384744 137 ntBASIC2□□□□□ -2.09
CX3CL1P78423 Y_RNA.577-201ENST00000384794 101 ntBASIC2□□□□□ -2.09
CX3CL1P78423 MIR10B-201ENST00000385011 110 ntBASIC2□□□□□ -2.09
CX3CL1P78423 MIR27B-201ENST00000385129 97 ntBASIC2□□□□□ -2.09
CX3CL1P78423 MIR320B2-201ENST00000408479 138 ntBASIC2□□□□□ -2.09
CX3CL1P78423 SRIP3-201ENST00000413200 219 ntBASIC2□□□□□ -2.09
CX3CL1P78423 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2□□□□□ -2.09
CX3CL1P78423 MRPS18CP6-201ENST00000423587 223 ntBASIC2□□□□□ -2.09
CX3CL1P78423 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2□□□□□ -2.09
CX3CL1P78423 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2□□□□□ -2.09
CX3CL1P78423 RNU7-87P-201ENST00000459343 62 ntBASIC2□□□□□ -2.09
CX3CL1P78423 AL049873.1-201ENST00000480540 376 ntBASIC2□□□□□ -2.09
CX3CL1P78423 AC105758.1-201ENST00000506038 399 ntBASIC2□□□□□ -2.09
CX3CL1P78423 RNU6-1114P-201ENST00000516022 107 ntBASIC2□□□□□ -2.09
CX3CL1P78423 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2□□□□□ -2.09
CX3CL1P78423 AC080078.3-201ENST00000605407 463 ntBASIC2□□□□□ -2.09
CX3CL1P78423 AL050343.2-201ENST00000607338 280 ntBASIC2□□□□□ -2.09
CX3CL1P78423 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2□□□□□ -2.09
CX3CL1P78423 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2□□□□□ -2.09
CX3CL1P78423 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
CX3CL1P78423 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
CX3CL1P78423 RNU6-1115P-201ENST00000362490 106 ntBASIC1.99□□□□□ -2.09
CX3CL1P78423 Y_RNA.146-201ENST00000363549 102 ntBASIC1.99□□□□□ -2.09
CX3CL1P78423 SNORA67.1-201ENST00000364749 141 ntBASIC1.99□□□□□ -2.09
CX3CL1P78423 SNORD31B-201ENST00000364977 69 ntBASIC1.99□□□□□ -2.09
CX3CL1P78423 Y_RNA.315-201ENST00000365117 102 ntBASIC1.99□□□□□ -2.09
CX3CL1P78423 Y_RNA.419-201ENST00000384041 102 ntBASIC1.99□□□□□ -2.09
CX3CL1P78423 SNORD14D-201ENST00000384390 87 ntBASIC1.99□□□□□ -2.09
CX3CL1P78423 RNU6-1026P-201ENST00000384465 108 ntBASIC1.99□□□□□ -2.09
CX3CL1P78423 Y_RNA.535-201ENST00000384612 99 ntBASIC1.99□□□□□ -2.09
CX3CL1P78423 Y_RNA.579-201ENST00000390939 94 ntBASIC1.99□□□□□ -2.09
CX3CL1P78423 RNU6-1156P-201ENST00000410365 100 ntBASIC1.99□□□□□ -2.09
CX3CL1P78423 RNA5SP270-201ENST00000411361 118 ntBASIC1.99□□□□□ -2.09
CX3CL1P78423 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.99□□□□□ -2.09
CX3CL1P78423 WARS2P1-201ENST00000429678 537 ntBASIC1.99□□□□□ -2.09
CX3CL1P78423 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC1.99□□□□□ -2.09
CX3CL1P78423 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC1.99□□□□□ -2.09
CX3CL1P78423 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.99□□□□□ -2.09
CX3CL1P78423 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.99□□□□□ -2.09
CX3CL1P78423 SNORA25.14-201ENST00000516481 132 ntBASIC1.99□□□□□ -2.09
CX3CL1P78423 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.99□□□□□ -2.09
CX3CL1P78423 MIR5695-201ENST00000579717 85 ntBASIC1.99□□□□□ -2.09
CX3CL1P78423 AC025754.2-201ENST00000606491 432 ntBASIC1.99□□□□□ -2.09
CX3CL1P78423 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CX3CL1P78423 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
CX3CL1P78423 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CX3CL1P78423 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CX3CL1P78423 RNU6-490P-201ENST00000362985 107 ntBASIC1.98□□□□□ -2.09
CX3CL1P78423 Y_RNA.99-201ENST00000363138 105 ntBASIC1.98□□□□□ -2.09
CX3CL1P78423 RNA5SP68-201ENST00000363885 119 ntBASIC1.98□□□□□ -2.09
CX3CL1P78423 RNU6-280P-201ENST00000364145 104 ntBASIC1.98□□□□□ -2.09
CX3CL1P78423 Y_RNA.332-201ENST00000365271 113 ntBASIC1.98□□□□□ -2.09
CX3CL1P78423 Y_RNA.463-201ENST00000384271 102 ntBASIC1.98□□□□□ -2.09
CX3CL1P78423 RNA5SP213-201ENST00000391031 106 ntBASIC1.98□□□□□ -2.09
CX3CL1P78423 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.98□□□□□ -2.09
CX3CL1P78423 AC096638.1-201ENST00000444678 216 ntBASIC1.98□□□□□ -2.09
CX3CL1P78423 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 270.6 ms