Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 MTND4P5-201ENST00000435821 1374 ntBASIC0.3□□□□□ -2.36
LSM6P62312 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
LSM6P62312 RNU6-199P-201ENST00000362954 107 ntBASIC0.29□□□□□ -2.36
LSM6P62312 RNU6-179P-201ENST00000363350 107 ntBASIC0.29□□□□□ -2.36
LSM6P62312 RNU6-975P-201ENST00000384296 105 ntBASIC0.29□□□□□ -2.36
LSM6P62312 Y_RNA.504-201ENST00000384481 104 ntBASIC0.29□□□□□ -2.36
LSM6P62312 RNU6-1237P-201ENST00000384777 107 ntBASIC0.29□□□□□ -2.36
LSM6P62312 MIR660-201ENST00000385235 97 ntBASIC0.29□□□□□ -2.36
LSM6P62312 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.29□□□□□ -2.36
LSM6P62312 AC012306.1-201ENST00000423267 114 ntBASIC0.29□□□□□ -2.36
LSM6P62312 AC007283.2-201ENST00000424739 197 ntBASIC0.29□□□□□ -2.36
LSM6P62312 AC000111.3-201ENST00000433478 193 ntBASIC0.29□□□□□ -2.36
LSM6P62312 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.29□□□□□ -2.36
LSM6P62312 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.29□□□□□ -2.36
LSM6P62312 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.29□□□□□ -2.36
LSM6P62312 RN7SKP12-201ENST00000516275 143 ntBASIC0.29□□□□□ -2.36
LSM6P62312 SNORA31.10-201ENST00000516482 106 ntBASIC0.29□□□□□ -2.36
LSM6P62312 MTND1P15-201ENST00000579262 949 ntBASIC0.29□□□□□ -2.36
LSM6P62312 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.29□□□□□ -2.36
LSM6P62312 AC243829.6-201ENST00000612652 106 ntBASIC0.29□□□□□ -2.36
LSM6P62312 MIR8054-201ENST00000620877 86 ntBASIC0.29□□□□□ -2.36
LSM6P62312 RNU6-39P-201ENST00000384344 107 ntBASIC0.28□□□□□ -2.36
LSM6P62312 SNORD41-201ENST00000386967 70 ntBASIC0.28□□□□□ -2.36
LSM6P62312 SNORD115.1-201ENST00000391109 76 ntBASIC0.28□□□□□ -2.36
LSM6P62312 RPL37P21-201ENST00000435890 276 ntBASIC0.28□□□□□ -2.36
LSM6P62312 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC0.28□□□□□ -2.36
LSM6P62312 U7.7-201ENST00000459276 60 ntBASIC0.28□□□□□ -2.36
LSM6P62312 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.28□□□□□ -2.36
LSM6P62312 AC079382.1-201ENST00000493346 557 ntBASIC0.28□□□□□ -2.36
LSM6P62312 AC010486.2-201ENST00000505572 483 ntBASIC0.28□□□□□ -2.36
LSM6P62312 SNORA19.3-201ENST00000516165 130 ntBASIC0.28□□□□□ -2.36
LSM6P62312 RNA5SP220-201ENST00000516298 104 ntBASIC0.28□□□□□ -2.36
LSM6P62312 RNA5SP134-201ENST00000516492 96 ntBASIC0.28□□□□□ -2.36
LSM6P62312 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC0.28□□□□□ -2.36
LSM6P62312 AC026470.2-201ENST00000561492 181 ntBASIC0.28□□□□□ -2.36
LSM6P62312 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.28□□□□□ -2.36
LSM6P62312 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.28□□□□□ -2.36
LSM6P62312 MIR4711-201ENST00000578274 70 ntBASIC0.28□□□□□ -2.36
LSM6P62312 AL078603.1-201ENST00000603824 313 ntBASIC0.28□□□□□ -2.36
LSM6P62312 AL359999.1-201ENST00000604513 294 ntBASIC0.28□□□□□ -2.36
LSM6P62312 AL158042.1-201ENST00000605338 460 ntBASIC0.28□□□□□ -2.36
LSM6P62312 AC080013.3-201ENST00000606839 578 ntBASIC0.28□□□□□ -2.36
LSM6P62312 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.28□□□□□ -2.36
LSM6P62312 AL603839.4-201ENST00000624658 1005 ntBASIC0.28□□□□□ -2.36
LSM6P62312 AL450472.1-202ENST00000637286 180 ntBASIC0.28□□□□□ -2.36
LSM6P62312 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.27□□□□□ -2.37
LSM6P62312 AL049830.1-201ENST00000468034 425 ntBASIC0.27□□□□□ -2.37
LSM6P62312 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.27□□□□□ -2.37
LSM6P62312 HMGB1P29-201ENST00000505659 499 ntBASIC0.27□□□□□ -2.37
LSM6P62312 AC022493.2-201ENST00000506122 481 ntBASIC0.27□□□□□ -2.37
LSM6P62312 AC079140.5-201ENST00000507882 310 ntBASIC0.27□□□□□ -2.37
LSM6P62312 Y_RNA.676-201ENST00000516393 96 ntBASIC0.27□□□□□ -2.37
LSM6P62312 RNU6-405P-201ENST00000516637 110 ntBASIC0.27□□□□□ -2.37
LSM6P62312 RNU6-467P-201ENST00000517027 110 ntBASIC0.27□□□□□ -2.37
LSM6P62312 SUB1P2-201ENST00000556401 297 ntBASIC0.27□□□□□ -2.37
LSM6P62312 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.27□□□□□ -2.37
LSM6P62312 AC104458.1-201ENST00000608243 463 ntBASIC0.27□□□□□ -2.37
LSM6P62312 AL359075.3-201ENST00000613288 217 ntBASIC0.27□□□□□ -2.37
LSM6P62312 AC090625.1-201ENST00000357130 210 ntBASIC0.26□□□□□ -2.37
LSM6P62312 RNU6-428P-201ENST00000362942 107 ntBASIC0.26□□□□□ -2.37
LSM6P62312 Y_RNA.287-201ENST00000364853 94 ntBASIC0.26□□□□□ -2.37
LSM6P62312 VTRNA1-3-201ENST00000365645 89 ntBASIC0.26□□□□□ -2.37
LSM6P62312 RNU6-1093P-201ENST00000391194 107 ntBASIC0.26□□□□□ -2.37
LSM6P62312 RNA5SP467-201ENST00000391274 118 ntBASIC0.26□□□□□ -2.37
LSM6P62312 MIR936-201ENST00000401264 98 ntBASIC0.26□□□□□ -2.37
LSM6P62312 MRPL42P3-201ENST00000401492 326 ntBASIC0.26□□□□□ -2.37
LSM6P62312 MRPL42P2-201ENST00000403169 426 ntBASIC0.26□□□□□ -2.37
LSM6P62312 AC010587.1-201ENST00000505809 469 ntBASIC0.26□□□□□ -2.37
LSM6P62312 AC105185.1-201ENST00000518705 535 ntBASIC0.26□□□□□ -2.37
LSM6P62312 AC080078.2-201ENST00000603766 501 ntBASIC0.26□□□□□ -2.37
LSM6P62312 AC091805.2-201ENST00000603848 235 ntBASIC0.26□□□□□ -2.37
LSM6P62312 AC006001.4-201ENST00000622243 395 ntBASIC0.26□□□□□ -2.37
LSM6P62312 AC068787.1-201ENST00000623908 691 ntBASIC0.26□□□□□ -2.37
LSM6P62312 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.25□□□□□ -2.37
LSM6P62312 RNU4-48P-201ENST00000365559 182 ntBASIC0.25□□□□□ -2.37
LSM6P62312 RNU6-440P-201ENST00000390882 105 ntBASIC0.25□□□□□ -2.37
LSM6P62312 MTCYBP36-201ENST00000404146 440 ntBASIC0.25□□□□□ -2.37
LSM6P62312 SNORD99-201ENST00000408612 74 ntBASIC0.25□□□□□ -2.37
LSM6P62312 ELOCP4-201ENST00000420090 333 ntBASIC0.25□□□□□ -2.37
LSM6P62312 RPS27AP14-201ENST00000422868 454 ntBASIC0.25□□□□□ -2.37
LSM6P62312 AC245047.3-201ENST00000429428 127 ntBASIC0.25□□□□□ -2.37
LSM6P62312 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.25□□□□□ -2.37
LSM6P62312 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC0.25□□□□□ -2.37
LSM6P62312 AC016957.1-201ENST00000534895 309 ntBASIC0.25□□□□□ -2.37
LSM6P62312 ZNF519P3-201ENST00000557158 1032 ntBASIC0.25□□□□□ -2.37
LSM6P62312 AC004584.2-201ENST00000570407 410 ntBASIC0.25□□□□□ -2.37
LSM6P62312 BNIP3P40-201ENST00000596017 556 ntBASIC0.25□□□□□ -2.37
LSM6P62312 Z99497.2-201ENST00000603634 310 ntBASIC0.25□□□□□ -2.37
LSM6P62312 MTND3P19-201ENST00000603825 345 ntBASIC0.25□□□□□ -2.37
LSM6P62312 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.25□□□□□ -2.37
LSM6P62312 PRELID3BP2-201ENST00000605362 201 ntBASIC0.25□□□□□ -2.37
LSM6P62312 AC005562.2-201ENST00000618264 111 ntBASIC0.25□□□□□ -2.37
LSM6P62312 AP000484.1-201ENST00000620067 1252 ntBASIC0.25□□□□□ -2.37
LSM6P62312 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.25□□□□□ -2.37
LSM6P62312 AL445984.1-201ENST00000637834 659 ntBASIC0.25□□□□□ -2.37
LSM6P62312 SNORA2.2-201ENST00000365473 135 ntBASIC0.24□□□□□ -2.37
LSM6P62312 RNU6-809P-201ENST00000384461 107 ntBASIC0.24□□□□□ -2.37
LSM6P62312 MIR549A-201ENST00000385268 96 ntBASIC0.24□□□□□ -2.37
LSM6P62312 SNORD89-201ENST00000390981 114 ntBASIC0.24□□□□□ -2.37
LSM6P62312 RNA5SP193-201ENST00000410353 107 ntBASIC0.24□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms