Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC107032.1-201ENST00000485945 480 ntBASIC2.09□□□□□ -2.07
LMO4P61968 AC132942.1-201ENST00000486753 483 ntBASIC2.09□□□□□ -2.07
LMO4P61968 RPL23AP49-201ENST00000492925 468 ntBASIC2.09□□□□□ -2.07
LMO4P61968 AC010469.2-201ENST00000496412 480 ntBASIC2.09□□□□□ -2.07
LMO4P61968 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.09□□□□□ -2.07
LMO4P61968 AC025465.3-201ENST00000510570 311 ntBASIC2.09□□□□□ -2.07
LMO4P61968 AC067942.3-201ENST00000512025 362 ntBASIC2.09□□□□□ -2.07
LMO4P61968 RPPH1-2P-201ENST00000516688 293 ntBASIC2.09□□□□□ -2.07
LMO4P61968 AC010186.2-204ENST00000537668 439 ntBASIC2.09□□□□□ -2.07
LMO4P61968 AL442163.3-201ENST00000554110 156 ntBASIC2.09□□□□□ -2.07
LMO4P61968 SNORD53-201ENST00000579969 78 ntBASIC2.09□□□□□ -2.07
LMO4P61968 AL356280.1-201ENST00000603614 379 ntBASIC2.09□□□□□ -2.07
LMO4P61968 AC096772.1-201ENST00000609146 564 ntBASIC2.09□□□□□ -2.07
LMO4P61968 uc_338.14-201ENST00000613162 166 ntBASIC2.09□□□□□ -2.07
LMO4P61968 Z75746.1-201ENST00000440243 2080 ntBASIC2.09□□□□□ -2.07
LMO4P61968 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.09□□□□□ -2.08
LMO4P61968 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.08
LMO4P61968 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
LMO4P61968 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.09□□□□□ -2.08
LMO4P61968 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
LMO4P61968 RNA5SP289-201ENST00000362332 137 ntBASIC2.08□□□□□ -2.08
LMO4P61968 RNU6-527P-201ENST00000363425 104 ntBASIC2.08□□□□□ -2.08
LMO4P61968 Y_RNA.458-201ENST00000384240 102 ntBASIC2.08□□□□□ -2.08
LMO4P61968 Y_RNA.477-201ENST00000384352 108 ntBASIC2.08□□□□□ -2.08
LMO4P61968 RNU6-748P-201ENST00000384648 107 ntBASIC2.08□□□□□ -2.08
LMO4P61968 BTF3L4P2-201ENST00000392798 346 ntBASIC2.08□□□□□ -2.08
LMO4P61968 BMS1P22-201ENST00000414726 313 ntBASIC2.08□□□□□ -2.08
LMO4P61968 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.08□□□□□ -2.08
LMO4P61968 AL513124.1-201ENST00000450410 614 ntBASIC2.08□□□□□ -2.08
LMO4P61968 RNU7-87P-201ENST00000459343 62 ntBASIC2.08□□□□□ -2.08
LMO4P61968 TOMM22P6-201ENST00000465035 409 ntBASIC2.08□□□□□ -2.08
LMO4P61968 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.08□□□□□ -2.08
LMO4P61968 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.08□□□□□ -2.08
LMO4P61968 SNORA31.6-201ENST00000516241 130 ntBASIC2.08□□□□□ -2.08
LMO4P61968 Y_RNA.706-201ENST00000516933 99 ntBASIC2.08□□□□□ -2.08
LMO4P61968 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.08□□□□□ -2.08
LMO4P61968 MRPS36P4-201ENST00000534436 298 ntBASIC2.08□□□□□ -2.08
LMO4P61968 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.08□□□□□ -2.08
LMO4P61968 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.08□□□□□ -2.08
LMO4P61968 MIR3199-1-201ENST00000582434 88 ntBASIC2.08□□□□□ -2.08
LMO4P61968 MIR4506-201ENST00000584693 77 ntBASIC2.08□□□□□ -2.08
LMO4P61968 MIR4765-201ENST00000585007 77 ntBASIC2.08□□□□□ -2.08
LMO4P61968 AC010928.2-201ENST00000588017 287 ntBASIC2.08□□□□□ -2.08
LMO4P61968 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.08□□□□□ -2.08
LMO4P61968 SDR42E1P4-201ENST00000620894 481 ntBASIC2.08□□□□□ -2.08
LMO4P61968 AC064859.1-201ENST00000624741 174 ntBASIC2.08□□□□□ -2.08
LMO4P61968 MIR7157-201ENST00000635801 60 ntBASIC2.08□□□□□ -2.08
LMO4P61968 U6.92-201ENST00000636464 89 ntBASIC2.08□□□□□ -2.08
LMO4P61968 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.08□□□□□ -2.08
LMO4P61968 AC080128.1-201ENST00000474389 1917 ntBASIC2.08□□□□□ -2.08
LMO4P61968 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.08□□□□□ -2.08
LMO4P61968 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.08□□□□□ -2.08
LMO4P61968 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
LMO4P61968 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.07□□□□□ -2.08
LMO4P61968 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.07□□□□□ -2.08
LMO4P61968 AC009541.1-201ENST00000438279 2662 ntBASIC2.07□□□□□ -2.08
LMO4P61968 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.07□□□□□ -2.08
LMO4P61968 AL359854.1-201ENST00000614203 1594 ntBASIC2.07□□□□□ -2.08
LMO4P61968 AC233981.2-201ENST00000611524 1614 ntBASIC2.07□□□□□ -2.08
LMO4P61968 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
LMO4P61968 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
LMO4P61968 RNU6-222P-201ENST00000362438 107 ntBASIC2.07□□□□□ -2.08
LMO4P61968 Y_RNA.552-201ENST00000384665 112 ntBASIC2.07□□□□□ -2.08
LMO4P61968 RNA5SP210-201ENST00000391034 120 ntBASIC2.07□□□□□ -2.08
LMO4P61968 RNU6-1093P-201ENST00000391194 107 ntBASIC2.07□□□□□ -2.08
LMO4P61968 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
LMO4P61968 MIR887-201ENST00000401258 79 ntBASIC2.07□□□□□ -2.08
LMO4P61968 AL359511.1-201ENST00000402970 211 ntBASIC2.07□□□□□ -2.08
LMO4P61968 SDAD1P3-201ENST00000427380 333 ntBASIC2.07□□□□□ -2.08
LMO4P61968 AC243964.1-201ENST00000441814 261 ntBASIC2.07□□□□□ -2.08
LMO4P61968 AL031659.1-201ENST00000447075 539 ntBASIC2.07□□□□□ -2.08
LMO4P61968 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.07□□□□□ -2.08
LMO4P61968 MTND4LP30-201ENST00000454092 297 ntBASIC2.07□□□□□ -2.08
LMO4P61968 AC006026.2-201ENST00000457376 180 ntBASIC2.07□□□□□ -2.08
LMO4P61968 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.07□□□□□ -2.08
LMO4P61968 RPL39P38-201ENST00000467018 153 ntBASIC2.07□□□□□ -2.08
LMO4P61968 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.07□□□□□ -2.08
LMO4P61968 TRBVB-201ENST00000477100 408 ntBASIC2.07□□□□□ -2.08
LMO4P61968 AC098869.1-201ENST00000481627 292 ntBASIC2.07□□□□□ -2.08
LMO4P61968 AF186996.7-201ENST00000492781 209 ntBASIC2.07□□□□□ -2.08
LMO4P61968 ANXA2P1-201ENST00000505539 926 ntBASIC2.07□□□□□ -2.08
LMO4P61968 AC023141.11-201ENST00000508864 202 ntBASIC2.07□□□□□ -2.08
LMO4P61968 AC091874.1-201ENST00000511402 339 ntBASIC2.07□□□□□ -2.08
LMO4P61968 RNU7-175P-201ENST00000515915 61 ntBASIC2.07□□□□□ -2.08
LMO4P61968 RNU1-41P-201ENST00000516161 162 ntBASIC2.07□□□□□ -2.08
LMO4P61968 RNU1-48P-201ENST00000516400 162 ntBASIC2.07□□□□□ -2.08
LMO4P61968 RNA5SP24-201ENST00000516478 95 ntBASIC2.07□□□□□ -2.08
LMO4P61968 ACA59.2-201ENST00000517061 156 ntBASIC2.07□□□□□ -2.08
LMO4P61968 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.07□□□□□ -2.08
LMO4P61968 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.07□□□□□ -2.08
LMO4P61968 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.07□□□□□ -2.08
LMO4P61968 AC012433.1-201ENST00000588916 398 ntBASIC2.07□□□□□ -2.08
LMO4P61968 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.07□□□□□ -2.08
LMO4P61968 AC073410.2-201ENST00000603240 332 ntBASIC2.07□□□□□ -2.08
LMO4P61968 SCARNA4-201ENST00000629045 128 ntBASIC2.07□□□□□ -2.08
LMO4P61968 U6.104-201ENST00000637979 90 ntBASIC2.07□□□□□ -2.08
LMO4P61968 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.07□□□□□ -2.08
LMO4P61968 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
LMO4P61968 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
LMO4P61968 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms