Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
CLDN6P56747 Y_RNA.393-201ENST00000383936 102 ntBASIC1.04□□□□□ -2.24
CLDN6P56747 RNU6-418P-201ENST00000384035 107 ntBASIC1.04□□□□□ -2.24
CLDN6P56747 MIR618-201ENST00000385287 98 ntBASIC1.04□□□□□ -2.24
CLDN6P56747 RNU6-1093P-201ENST00000391194 107 ntBASIC1.04□□□□□ -2.24
CLDN6P56747 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.04□□□□□ -2.24
CLDN6P56747 COX6CP10-201ENST00000416832 224 ntBASIC1.04□□□□□ -2.24
CLDN6P56747 AC060773.1-201ENST00000421698 310 ntBASIC1.04□□□□□ -2.24
CLDN6P56747 CYCSP46-201ENST00000423569 204 ntBASIC1.04□□□□□ -2.24
CLDN6P56747 CST2P1-201ENST00000425770 87 ntBASIC1.04□□□□□ -2.24
CLDN6P56747 AC073910.1-201ENST00000445047 438 ntBASIC1.04□□□□□ -2.24
CLDN6P56747 GMFBP1-201ENST00000467831 427 ntBASIC1.04□□□□□ -2.24
CLDN6P56747 AL163195.1-201ENST00000496941 348 ntBASIC1.04□□□□□ -2.24
CLDN6P56747 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.04□□□□□ -2.24
CLDN6P56747 AC011406.1-201ENST00000512440 370 ntBASIC1.04□□□□□ -2.24
CLDN6P56747 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.04□□□□□ -2.24
CLDN6P56747 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
CLDN6P56747 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.04□□□□□ -2.24
CLDN6P56747 MTCO3P23-201ENST00000561363 289 ntBASIC1.04□□□□□ -2.24
CLDN6P56747 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.04□□□□□ -2.24
CLDN6P56747 MIR3973-201ENST00000579824 107 ntBASIC1.04□□□□□ -2.24
CLDN6P56747 AL050343.2-201ENST00000607338 280 ntBASIC1.04□□□□□ -2.24
CLDN6P56747 AL050303.3-201ENST00000613704 284 ntBASIC1.04□□□□□ -2.24
CLDN6P56747 AC122133.1-201ENST00000613964 233 ntBASIC1.04□□□□□ -2.24
CLDN6P56747 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.03□□□□□ -2.24
CLDN6P56747 RNU6-282P-201ENST00000365357 103 ntBASIC1.03□□□□□ -2.24
CLDN6P56747 RNY1P4-201ENST00000384595 115 ntBASIC1.03□□□□□ -2.24
CLDN6P56747 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.03□□□□□ -2.24
CLDN6P56747 MIR1285-1-201ENST00000408593 84 ntBASIC1.03□□□□□ -2.24
CLDN6P56747 BX295541.1-201ENST00000417774 250 ntBASIC1.03□□□□□ -2.24
CLDN6P56747 AC090960.1-201ENST00000421072 306 ntBASIC1.03□□□□□ -2.24
CLDN6P56747 SNX2P2-201ENST00000424553 323 ntBASIC1.03□□□□□ -2.24
CLDN6P56747 AC132479.1-201ENST00000449160 144 ntBASIC1.03□□□□□ -2.24
CLDN6P56747 AL133373.1-201ENST00000497098 94 ntBASIC1.03□□□□□ -2.24
CLDN6P56747 AC067942.3-201ENST00000512025 362 ntBASIC1.03□□□□□ -2.24
CLDN6P56747 RNA5SP384-201ENST00000516615 116 ntBASIC1.03□□□□□ -2.24
CLDN6P56747 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.03□□□□□ -2.24
CLDN6P56747 MIR3941-201ENST00000582572 103 ntBASIC1.03□□□□□ -2.24
CLDN6P56747 RNU6-85P-201ENST00000605989 107 ntBASIC1.03□□□□□ -2.24
CLDN6P56747 SNORD114-21-201ENST00000606412 72 ntBASIC1.03□□□□□ -2.24
CLDN6P56747 AL365434.2-201ENST00000607979 234 ntBASIC1.03□□□□□ -2.24
CLDN6P56747 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.03□□□□□ -2.24
CLDN6P56747 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.03□□□□□ -2.24
CLDN6P56747 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.03□□□□□ -2.25
CLDN6P56747 Y_RNA.374-201ENST00000365606 101 ntBASIC1.02□□□□□ -2.25
CLDN6P56747 RNU6-297P-201ENST00000384636 107 ntBASIC1.02□□□□□ -2.25
CLDN6P56747 MIR194-1-201ENST00000384892 85 ntBASIC1.02□□□□□ -2.25
CLDN6P56747 MIR300-201ENST00000401138 83 ntBASIC1.02□□□□□ -2.25
CLDN6P56747 AL591704.2-201ENST00000421658 181 ntBASIC1.02□□□□□ -2.25
CLDN6P56747 AC133104.1-201ENST00000429100 218 ntBASIC1.02□□□□□ -2.25
CLDN6P56747 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.02□□□□□ -2.25
CLDN6P56747 AL445305.1-201ENST00000432577 575 ntBASIC1.02□□□□□ -2.25
CLDN6P56747 AC009541.1-201ENST00000438279 2662 ntBASIC1.02□□□□□ -2.25
CLDN6P56747 MTND4LP16-201ENST00000440828 295 ntBASIC1.02□□□□□ -2.25
CLDN6P56747 C1DP4-201ENST00000455429 424 ntBASIC1.02□□□□□ -2.25
CLDN6P56747 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.02□□□□□ -2.25
CLDN6P56747 RPL31P58-201ENST00000469001 379 ntBASIC1.02□□□□□ -2.25
CLDN6P56747 RPS26P45-201ENST00000471748 340 ntBASIC1.02□□□□□ -2.25
CLDN6P56747 AC010486.2-201ENST00000505572 483 ntBASIC1.02□□□□□ -2.25
CLDN6P56747 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.02□□□□□ -2.25
CLDN6P56747 RNU7-40P-201ENST00000516397 64 ntBASIC1.02□□□□□ -2.25
CLDN6P56747 AP002963.1-201ENST00000530590 184 ntBASIC1.02□□□□□ -2.25
CLDN6P56747 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.02□□□□□ -2.25
CLDN6P56747 MIR4753-201ENST00000585119 83 ntBASIC1.02□□□□□ -2.25
CLDN6P56747 NIFKP6-201ENST00000598115 845 ntBASIC1.02□□□□□ -2.25
CLDN6P56747 AL353149.1-201ENST00000610667 244 ntBASIC1.02□□□□□ -2.25
CLDN6P56747 MIR8065-201ENST00000620577 100 ntBASIC1.02□□□□□ -2.25
CLDN6P56747 AC009033.1-201ENST00000624279 431 ntBASIC1.02□□□□□ -2.25
CLDN6P56747 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.02□□□□□ -2.25
CLDN6P56747 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.01□□□□□ -2.25
CLDN6P56747 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
CLDN6P56747 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
CLDN6P56747 SNORA4.2-201ENST00000365313 147 ntBASIC1.01□□□□□ -2.25
CLDN6P56747 Y_RNA.399-201ENST00000383955 105 ntBASIC1.01□□□□□ -2.25
CLDN6P56747 RNU6-606P-201ENST00000384721 111 ntBASIC1.01□□□□□ -2.25
CLDN6P56747 MIR513A1-201ENST00000385138 129 ntBASIC1.01□□□□□ -2.25
CLDN6P56747 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.01□□□□□ -2.25
CLDN6P56747 MIR1283-1-201ENST00000408494 87 ntBASIC1.01□□□□□ -2.25
CLDN6P56747 RNU2-29P-201ENST00000410423 189 ntBASIC1.01□□□□□ -2.25
CLDN6P56747 RPL37P10-201ENST00000412884 288 ntBASIC1.01□□□□□ -2.25
CLDN6P56747 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.01□□□□□ -2.25
CLDN6P56747 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.01□□□□□ -2.25
CLDN6P56747 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.01□□□□□ -2.25
CLDN6P56747 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.01□□□□□ -2.25
CLDN6P56747 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.01□□□□□ -2.25
CLDN6P56747 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.01□□□□□ -2.25
CLDN6P56747 SNRPFP3-201ENST00000457792 225 ntBASIC1.01□□□□□ -2.25
CLDN6P56747 snoU13.6-201ENST00000458785 104 ntBASIC1.01□□□□□ -2.25
CLDN6P56747 RNU7-167P-201ENST00000459160 62 ntBASIC1.01□□□□□ -2.25
CLDN6P56747 RNU7-34P-201ENST00000459394 64 ntBASIC1.01□□□□□ -2.25
CLDN6P56747 SNORD42A-201ENST00000459584 64 ntBASIC1.01□□□□□ -2.25
CLDN6P56747 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.01□□□□□ -2.25
CLDN6P56747 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.01□□□□□ -2.25
CLDN6P56747 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.01□□□□□ -2.25
CLDN6P56747 MTND1P22-201ENST00000510572 951 ntBASIC1.01□□□□□ -2.25
CLDN6P56747 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.01□□□□□ -2.25
CLDN6P56747 DEFB131C-201ENST00000528817 165 ntBASIC1.01□□□□□ -2.25
CLDN6P56747 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.01□□□□□ -2.25
CLDN6P56747 AL512310.8-201ENST00000550183 120 ntBASIC1.01□□□□□ -2.25
CLDN6P56747 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms